FFCP PHASE1:Hg19::chr12:14849553..14849558,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2984 | |EntrezGene=2984 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4688 | |HGNC=4688 | ||
|TSSclassifier=strong | |||
|UniProt=P25092 | |UniProt=P25092 | ||
|association_with_transcript=-34bp_to_ENST00000261170,NM_004963,uc001rcd.2,uc009zhz.2_5end | |association_with_transcript=-34bp_to_ENST00000261170,NM_004963,uc001rcd.2,uc009zhz.2_5end | ||
|cluster_id=chr12:14849553..14849558,- | |||
|coexpression_cluster_id=C579 | |coexpression_cluster_id=C579 | ||
|description=CAGE_peak_5_at_GUCY2C_5end | |description=CAGE_peak_5_at_GUCY2C_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000342!2.63e-16!1;CL:0002565!2.63e-16!1;CL:0002563!4.18e-16!4;CL:0002535!3.43e-09!2;CL:0002253!8.74e-09!2 | |ontology_enrichment_celltype=CL:0000342!2.63e-16!1;CL:0002565!2.63e-16!1;CL:0002563!4.18e-16!4;CL:0002535!3.43e-09!2;CL:0002253!8.74e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0002535;3.11e-21;2 | |ontology_enrichment_celltype_v019=CL:0002535;3.11e-21;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002535,3.11e-21,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3119!1.40e-17!14 | |ontology_enrichment_disease=DOID:3119!1.40e-17!14 | ||
|ontology_enrichment_disease_v019=DOID:4362;2.53e-09;5 | |ontology_enrichment_disease_v019=DOID:4362;2.53e-09;5 | ||
|ontology_enrichment_disease_v019_2=DOID:4362,2.53e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000160!2.37e-26!27;UBERON:0005409!2.00e-20!35;UBERON:0002506!2.63e-16!1;UBERON:0001769!2.63e-16!1;UBERON:0001242!4.18e-16!4;UBERON:0001262!4.18e-16!4;UBERON:0004786!4.18e-16!4;UBERON:0004808!4.18e-16!4;UBERON:0001277!4.18e-16!4;UBERON:0001052!5.68e-16!4;UBERON:0003350!4.39e-13!5;UBERON:0000059!4.66e-13!11;UBERON:0004907!5.60e-13!5;UBERON:0002108!6.20e-10!14;UBERON:0006955!3.43e-09!2;UBERON:0004801!3.43e-09!2;UBERON:0001155!1.02e-07!9;UBERON:0000485!1.13e-07!9 | |ontology_enrichment_uberon=UBERON:0000160!2.37e-26!27;UBERON:0005409!2.00e-20!35;UBERON:0002506!2.63e-16!1;UBERON:0001769!2.63e-16!1;UBERON:0001242!4.18e-16!4;UBERON:0001262!4.18e-16!4;UBERON:0004786!4.18e-16!4;UBERON:0004808!4.18e-16!4;UBERON:0001277!4.18e-16!4;UBERON:0001052!5.68e-16!4;UBERON:0003350!4.39e-13!5;UBERON:0000059!4.66e-13!11;UBERON:0004907!5.60e-13!5;UBERON:0002108!6.20e-10!14;UBERON:0006955!3.43e-09!2;UBERON:0004801!3.43e-09!2;UBERON:0001155!1.02e-07!9;UBERON:0000485!1.13e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;4.08e-71;4!UBERON:0000160;1.49e-35;17!UBERON:0005409;5.02e-28;22!UBERON:0006955;3.11e-21;2!UBERON:0004801;3.11e-21;2!UBERON:0004921;2.80e-16;33!UBERON:0002114;1.83e-14;2!UBERON:0001555;4.35e-09;54!UBERON:0000002;5.54e-08;6!UBERON:0001560;5.54e-08;6 | |ontology_enrichment_uberon_v019=UBERON:0002108;4.08e-71;4!UBERON:0000160;1.49e-35;17!UBERON:0005409;5.02e-28;22!UBERON:0006955;3.11e-21;2!UBERON:0004801;3.11e-21;2!UBERON:0004921;2.80e-16;33!UBERON:0002114;1.83e-14;2!UBERON:0001555;4.35e-09;54!UBERON:0000002;5.54e-08;6!UBERON:0001560;5.54e-08;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,5.20e-71,4;UBERON:0000160,1.49e-35,17;UBERON:0005409,6.80e-25,25;UBERON:0006955,3.11e-21,2;UBERON:0004801,3.11e-21,2;UBERON:0002114,2.09e-14,2;UBERON:0000002,5.54e-08,6;UBERON:0001560,5.54e-08,6 | |||
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|short_description=p5@GUCY2C | |short_description=p5@GUCY2C | ||
}} | }} |
Latest revision as of 13:31, 17 September 2015
Short description: | p5@GUCY2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GUCY2C_5end |
Coexpression cluster: | C579_small_argyrophil_colon_duodenum_signet_temporal_Intestinal |
Association with transcript: | -34bp_to_ENST00000261170, NM_004963, uc001rcd.2, uc009zhz.2_5end |
EntrezGene: | GUCY2C |
HGNC: | 4688 |
UniProt: | P25092 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 3.11e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
small intestine | 5.20e-71 | 4 |
intestine | 1.49e-35 | 17 |
gastrointestinal system | 6.80e-25 | 25 |
uterine epithelium | 3.11e-21 | 2 |
cervix epithelium | 3.11e-21 | 2 |
duodenum | 2.09e-14 | 2 |
uterine cervix | 5.54e-08 | 6 |
neck of organ | 5.54e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 2.53e-09 | 5 |