FFCP PHASE1:Hg19::chr15:32907702..32907729,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9824 | |EntrezGene=9824 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15783 | |HGNC=15783 | ||
|TSSclassifier=strong | |||
|UniProt=Q6P4F7 | |UniProt=Q6P4F7 | ||
|association_with_transcript=11bp_to_ENST00000361627,NM_014783,NM_199357,uc001zgw.2,uc001zgx.2,uc001zgy.1_5end | |association_with_transcript=11bp_to_ENST00000361627,NM_014783,NM_199357,uc001zgw.2,uc001zgx.2,uc001zgy.1_5end | ||
|cluster_id=chr15:32907702..32907729,+ | |||
|coexpression_cluster_id=C109 | |coexpression_cluster_id=C109 | ||
|description=CAGE_peak_1_at_ARHGAP11A_5end | |description=CAGE_peak_1_at_ARHGAP11A_5end | ||
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|ontology_enrichment_celltype=CL:0000548!4.77e-16!679;CL:0000004!4.77e-16!679;CL:0000255!4.77e-16!679;CL:0000012!7.08e-16!682;CL:0000066!5.33e-14!254;CL:0000003!7.65e-10!722;CL:0000055!2.16e-07!180;CL:0000333!5.12e-07!41;CL:0000063!7.43e-07!578;CL:0000133!8.89e-07!59 | |ontology_enrichment_celltype=CL:0000548!4.77e-16!679;CL:0000004!4.77e-16!679;CL:0000255!4.77e-16!679;CL:0000012!7.08e-16!682;CL:0000066!5.33e-14!254;CL:0000003!7.65e-10!722;CL:0000055!2.16e-07!180;CL:0000333!5.12e-07!41;CL:0000063!7.43e-07!578;CL:0000133!8.89e-07!59 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.99e-13,253;CL:0000333,2.71e-07,41;CL:0000133,4.24e-07,59 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!6.76e-52!235;DOID:14566!1.64e-50!239;DOID:0050687!6.01e-29!143;DOID:0050686!4.48e-25!137;DOID:305!2.30e-20!106;DOID:2531!4.50e-17!51;DOID:0060083!4.50e-17!51;DOID:1240!1.05e-14!39;DOID:8692!3.21e-13!31;DOID:3095!5.61e-08!22;DOID:2994!5.61e-08!22 | |ontology_enrichment_disease=DOID:162!6.76e-52!235;DOID:14566!1.64e-50!239;DOID:0050687!6.01e-29!143;DOID:0050686!4.48e-25!137;DOID:305!2.30e-20!106;DOID:2531!4.50e-17!51;DOID:0060083!4.50e-17!51;DOID:1240!1.05e-14!39;DOID:8692!3.21e-13!31;DOID:3095!5.61e-08!22;DOID:2994!5.61e-08!22 | ||
|ontology_enrichment_disease_v019=DOID:8692;4.68e-13;31!DOID:1240;4.18e-12;39!DOID:2531;1.10e-10;51!DOID:0060083;1.10e-10;51!DOID:3095;2.99e-08;22!DOID:2994;2.99e-08;22!DOID:0050687;1.67e-07;143!DOID:305;4.58e-07;106 | |ontology_enrichment_disease_v019=DOID:8692;4.68e-13;31!DOID:1240;4.18e-12;39!DOID:2531;1.10e-10;51!DOID:0060083;1.10e-10;51!DOID:3095;2.99e-08;22!DOID:2994;2.99e-08;22!DOID:0050687;1.67e-07;143!DOID:305;4.58e-07;106 | ||
|ontology_enrichment_disease_v019_2=DOID:162,3.20e-52,235;DOID:14566,1.06e-50,239;DOID:0050687,5.03e-29,143;DOID:0050686,8.26e-25,137;DOID:305,1.86e-20,106;DOID:2531,1.76e-17,51;DOID:0060083,1.76e-17,51;DOID:1240,4.91e-15,39;DOID:8692,1.68e-13,31;DOID:3095,3.55e-08,22;DOID:2994,3.55e-08,22 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@ARHGAP11A | |short_description=p1@ARHGAP11A | ||
}} | }} |
Latest revision as of 04:12, 17 September 2015
Short description: | p1@ARHGAP11A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARHGAP11A_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 11bp_to_ENST00000361627, NM_014783, NM_199357, uc001zgw.2, uc001zgx.2, uc001zgy.1_5end |
EntrezGene: | ARHGAP11A |
HGNC: | 15783 |
UniProt: | Q6P4F7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.99e-13 | 253 |
migratory neural crest cell | 2.71e-07 | 41 |
neurectodermal cell | 4.24e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.20e-52 | 235 |
disease of cellular proliferation | 1.06e-50 | 239 |
cell type cancer | 5.03e-29 | 143 |
organ system cancer | 8.26e-25 | 137 |
carcinoma | 1.86e-20 | 106 |
hematologic cancer | 1.76e-17 | 51 |
immune system cancer | 1.76e-17 | 51 |
leukemia | 4.91e-15 | 39 |
myeloid leukemia | 1.68e-13 | 31 |
germ cell and embryonal cancer | 3.55e-08 | 22 |
germ cell cancer | 3.55e-08 | 22 |