FFCP PHASE1:Hg19::chr6:139694244..139694256,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:139694244..139694256,- | |||
|coexpression_cluster_id=C715 | |coexpression_cluster_id=C715 | ||
|description=CAGE_peak_at_chr6:139694244..139694256,- | |description=CAGE_peak_at_chr6:139694244..139694256,- | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002559;1.36e-13;5!CL:0000349;1.49e-11;19!CL:0002541;6.71e-09;3!CL:0000346;1.64e-08;3!CL:1000428;1.64e-08;3!CL:0000197;8.44e-08;6!CL:0000098;8.44e-08;6!CL:0002167;8.44e-08;6!CL:0002561;9.35e-07;2 | |ontology_enrichment_celltype_v019=CL:0002559;1.36e-13;5!CL:0000349;1.49e-11;19!CL:0002541;6.71e-09;3!CL:0000346;1.64e-08;3!CL:1000428;1.64e-08;3!CL:0000197;8.44e-08;6!CL:0000098;8.44e-08;6!CL:0002167;8.44e-08;6!CL:0002561;9.35e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002559,6.23e-14,5;CL:0000349,8.75e-12,19;CL:0002541,7.97e-09,3;CL:0000346,9.58e-09,3;CL:1000428,9.58e-09,3;CL:0000197,5.75e-08,6;CL:0000098,5.75e-08,6;CL:0002167,5.75e-08,6;CL:0002561,7.25e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002073;1.36e-13;5!UBERON:0002346;1.93e-10;4!UBERON:0000923;1.93e-10;4!UBERON:0010316;1.93e-10;4!UBERON:0005291;1.93e-10;4!UBERON:0005631;5.15e-09;10!UBERON:0000158;5.15e-09;10!UBERON:0003124;6.71e-09;3!UBERON:0000920;6.71e-09;3!UBERON:0000478;1.03e-08;24!UBERON:0000412;1.64e-08;3!UBERON:0001992;1.64e-08;3!UBERON:0002050;2.37e-08;5!UBERON:0005423;2.37e-08;5!UBERON:0004457;8.41e-07;9!UBERON:0000042;8.41e-07;9!UBERON:0005933;9.35e-07;2!UBERON:0005942;9.35e-07;2!UBERON:0005932;9.35e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0002073;1.36e-13;5!UBERON:0002346;1.93e-10;4!UBERON:0000923;1.93e-10;4!UBERON:0010316;1.93e-10;4!UBERON:0005291;1.93e-10;4!UBERON:0005631;5.15e-09;10!UBERON:0000158;5.15e-09;10!UBERON:0003124;6.71e-09;3!UBERON:0000920;6.71e-09;3!UBERON:0000478;1.03e-08;24!UBERON:0000412;1.64e-08;3!UBERON:0001992;1.64e-08;3!UBERON:0002050;2.37e-08;5!UBERON:0005423;2.37e-08;5!UBERON:0004457;8.41e-07;9!UBERON:0000042;8.41e-07;9!UBERON:0005933;9.35e-07;2!UBERON:0005942;9.35e-07;2!UBERON:0005932;9.35e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002073,6.23e-14,5;UBERON:0005086,6.23e-14,5;UBERON:0005631,1.12e-10,14;UBERON:0000158,1.12e-10,14;UBERON:0003124,4.30e-09,7;UBERON:0000478,6.87e-09,24;UBERON:0000920,7.97e-09,3;UBERON:0000412,9.58e-09,3;UBERON:0001992,9.58e-09,3;UBERON:0004923,5.26e-07,66;UBERON:0005933,7.25e-07,2;UBERON:0005942,7.25e-07,2;UBERON:0005932,7.25e-07,2 | |||
|phase1_expression=1.63510541343501,0.642301571672949,1.12763523276777,1.0007329835313,0,0,0,0,0.522371256399677,0.245733936501509,0,0,0.527533956456907,1.11389717664042,0.331397375727916,0.672325146451775,0.602694528023977,0.730310090387373,0,0,0,0.940364164434263,0.286235987131057,0.136874425072884,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0.32389366601898,0.257575567634187,0.145398238779565,0,0.485168122375632,0,0,0,0.863077176966451,0.256160706529101,0.47296445977717,2.06847408441971,0,1.35426486594342,0,0.272906150057846,0.224723484445085,2.75475503133812,0.962787081228281,0.639337125799041,0,0,0.426224750532694,0.870627715885752,0,0,0.502497330513487,0,0.217188844705117,0.605399502633369,0.368277635987565,1.26584954976354,0.211255286311942,0,0,0.336985893439485,0,0,0.285012743741249,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0.196709770113833,0,0.205601498999509,0,0.32592226663359,0,0,0.111410456885174,0.589211814949674,0.443067789167242,0.812411591295047,0.384273959177026,0.390178042679635,0,0,0,0.14828656316206,0,1.04535523804977,0.113309342697566,0.383220493601921,0.34362744548263,0,0.318565414324097,0.651083453856419,0,0,0,0,0.473554504088034,0,0.201606743224732,0.802320587350522,0.434473211648397,0,0,0.511450247374121,0.361439152384566,3.00802746381534,2.75208386025565,0,0.973269740605272,0.472674085820339,0.221729397462564,0.614843499851882,0.0654895377488563,0,0,0.649094787309367,0.174129737299267,0.797747763113191,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0,0,0.516833518338658,0.35576626268671,0.33472061276467,0,0.760272105718513,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0.993943903390637,0.759783069987479,0.794455084879313,0.286836620748814,0.354668382198357,0.560677600142307,0,0,0,0,0,0.151357427644931,0.576175924479999,0.468642863667593,0.936480230490962,0.570471821544449,1.49448680551801,0,0,0,0.408308342509787,0.245668634623536,0.309977343527296,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0.680593098960126,0.179389635688862,1.06778694409284,1.90738711043606,0,0.515262646192195,0.515281080091258,0.37223371266318,1.0126579934476,0.389748020644795,0.504867548488229,2.85354685791128,0.161646056818812,0,0.403008392910561,2.54340888465731,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0.310983165046111,0.252320850875628,0,1.56449532329816,4.5026865673502,1.38134921352481,3.25057549622385,2.88751792667834,0,0.168584690078102,0,0.330881918197182,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0.171567810298526,0.109750285408626,0,0,0,0.977424915930974,0,0,0,0,0.288732895522148,0.462985512576611,0.761016608938393,0,0.858486162094873,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0,0.0895585227028483,0,0,0.492663237895943,0,0.829312462163088,0.576479813667846,0.37872730027914,0,0,0,0,0,0,0,0,0,0.5867062865676,0.258543431515556,0,0,1.86156681609409,0,0.257207374262142,2.83698264046557,0,1.00084595560703,1.62786481617433,1.64648067356154,0.325736184293735,0.710783897485092,0.791951872933429,0.301439377059586,0,0,0,1.00451418286425,2.10833939483032,0.718874566474748,0,0,0.723906533337896,2.26023954805422,0.358121926479791,0,0.394061520403854,0.431255149719035,0,0,0,0,0.167516265334349,0,0,5.9832291840805,0,1.10422342547226,0,0,3.11956292296211,13.7390321373815,4.1002627908823,1.99140405487612,0.300946099727719,0,0,0.664225598535437,0.368738337083406,1.65078867489357,0.587403472388222,0,0,0.431428401637234,0.106727557803444,1.21251028578504,0,1.20956117331872,0.496215615637554,0.920771839728375,0.561320188866147,0.768834895534206,1.53512174720011,1.12597744800525,0,0.462629081407967,0.710246901252508,0.164254312027618,0,0,0.120859449591622,0.200506470303285,0,0.574072240823034,0.546273504020151,0.524497659837696,0,0.0770153371044148,0,0,0.316654886678627,0,0,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0,0.657779629937804,0.261435451024901,0,0,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0.650060246036521,1.6068392984416,0.193341436584244,0,0,0.137836572484531,0.214840489736547,0.435050081742686,0.255679882248303,0.0890320356467374,0,0.192190067365106,0,0,0.464845549297286,0,0,0,0,0,0.18532421910392,0,0.372158369359667,1.2655176988749,0,1.27948895655667,0.855877976067841,0,0,0.719489830333259,0.823611089208164,0.706874414074119,0.404364963146632,0,0,0.975267478179181,0,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0.608731130888112,0,0,0.860468113224309,0.589494246078727,0.35667105148125,0.709522128141196,2.11107635297664,0.987884678879706,0.379473173765715,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0.854592569019785,0,0.245040215981032,0.185803175125719,0,0.0711418433484141,0.159426272728822,0,0.191505370132367,0,0.649243880549111,0,0,0.313359791546046,0,0,0.802940375518498,0.80719882876419,0,0.343505344755765,0.307240764308458,0.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| ||
|short_description=p@chr6:139694244..139694256,- | |short_description=p@chr6:139694244..139694256,- | ||
}} | }} |
Latest revision as of 20:14, 30 July 2015
Short description: | p@chr6:139694244..139694256, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:139694244..139694256, - |
Coexpression cluster: | C715_liposarcoma_Fibroblast_Mesenchymal_Olfactory_Hair_Mast_peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle cell | 6.23e-14 | 5 |
extraembryonic cell | 8.75e-12 | 19 |
chorionic membrane mesenchymal stem cell | 7.97e-09 | 3 |
hair follicle dermal papilla cell | 9.58e-09 | 3 |
stem cell of epidermis | 9.58e-09 | 3 |
receptor cell | 5.75e-08 | 6 |
sensory epithelial cell | 5.75e-08 | 6 |
olfactory epithelial cell | 5.75e-08 | 6 |
outer root sheath cell | 7.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hair follicle | 6.23e-14 | 5 |
hair follicle placode | 6.23e-14 | 5 |
extraembryonic membrane | 1.12e-10 | 14 |
membranous layer | 1.12e-10 | 14 |
chorion | 4.30e-09 | 7 |
extraembryonic structure | 6.87e-09 | 24 |
egg chorion | 7.97e-09 | 3 |
dermal papilla | 9.58e-09 | 3 |
papillary layer of dermis | 9.58e-09 | 3 |
organ component layer | 5.26e-07 | 66 |
hair root sheath | 7.25e-07 | 2 |
hair outer root sheath | 7.25e-07 | 2 |
bulb of hair follicle | 7.25e-07 | 2 |