FFCP PHASE1:Hg19::chr2:113977697..113977733,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:113977697..113977733,-
|short_description=p6@PAX8
|description=CAGE_peak_6_at_PAX8_5end
|association_with_transcript=320bp_to_ENST00000480684_5end
|Entrez...") |
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(13 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7849 | |EntrezGene=7849 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8622 | |HGNC=8622 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=320bp_to_ENST00000480684_5end | |||
|cluster_id=chr2:113977697..113977733,- | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_6_at_PAX8_5end | |||
|id=chr2:113977697..113977733,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000453;9.41e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.23e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.14e-08;13!UBERON:0008947;2.39e-08;29!UBERON:0004161;5.66e-07;11 | |||
|ontology_enrichment_disease=DOID:162!4.04e-14!235;DOID:14566!8.74e-14!239;DOID:0050687!1.53e-11!143;DOID:305!2.43e-11!106 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.97e-12;31!DOID:1240;5.39e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,9.35e-13,31;DOID:162,4.42e-11,235;DOID:14566,1.04e-10,239;DOID:305,1.37e-10,106;DOID:1240,9.64e-10,39;DOID:0050687,1.02e-07,143;DOID:2531,5.20e-07,51;DOID:0060083,5.20e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.60e-09!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.79e-22;9!UBERON:0001557;1.79e-22;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.11e-22,9;UBERON:0001557,3.89e-10,19 | |||
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| ||
|short_description=p6@PAX8 | |||
}} | }} |
Latest revision as of 12:47, 16 September 2015
Short description: | p6@PAX8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PAX8_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 320bp_to_ENST00000480684_5end |
EntrezGene: | PAX8 |
HGNC: | 8622 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.23e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.11e-22 | 9 |
upper respiratory tract | 3.89e-10 | 19 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 9.35e-13 | 31 |
cancer | 4.42e-11 | 235 |
disease of cellular proliferation | 1.04e-10 | 239 |
carcinoma | 1.37e-10 | 106 |
leukemia | 9.64e-10 | 39 |
cell type cancer | 1.02e-07 | 143 |
hematologic cancer | 5.20e-07 | 51 |
immune system cancer | 5.20e-07 | 51 |