FFCP PHASE1:Hg19::chr2:123497849..123497884,+: Difference between revisions
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|id=chr2:123497849..123497884,+
|short_description=p@chr2:123497849..123497884,+
|description=CAGE_peak_at_chr2:123497849..123497884,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:123497849..123497884,+ | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_at_chr2:123497849..123497884,+ | |||
|id=chr2:123497849..123497884,+ | |||
|ontology_enrichment_celltype=CL:0000623!2.78e-20!3;CL:0000825!2.78e-20!3;CL:0000080!1.07e-17!6;CL:0000838!4.15e-16!52;CL:0000542!9.23e-16!53;CL:0000051!9.23e-16!53;CL:0000988!5.15e-13!182;CL:0000738!1.96e-11!140;CL:0002087!8.72e-11!119;CL:0000037!7.12e-10!172;CL:0000566!7.12e-10!172;CL:0000767!1.06e-09!3;CL:0002032!3.51e-09!165;CL:0000837!3.51e-09!165;CL:0002031!7.94e-09!124;CL:0000946!3.80e-08!1;CL:0000786!3.80e-08!1;CL:0000980!3.80e-08!1;CL:0002127!9.72e-08!1;CL:0000914!9.72e-08!1;CL:0000911!9.72e-08!1;CL:0000814!9.72e-08!1;CL:0002042!9.72e-08!1;CL:0002039!9.72e-08!1;CL:0002040!9.72e-08!1;CL:0002041!9.72e-08!1;CL:0000945!6.15e-07!24;CL:0000826!6.15e-07!24;CL:0002393!6.97e-07!9;CL:0002397!6.97e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000946;4.22e-21;1!CL:0000786;4.22e-21;1!CL:0000945;5.82e-21;24!CL:0000542;1.35e-08;53!CL:0000623;7.02e-08;3!CL:0000767;8.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,4.22e-21,1;CL:0000786,4.22e-21,1;CL:0000980,4.22e-21,1;CL:0000945,5.82e-21,24;CL:0000826,5.82e-21,24;CL:0000838,1.44e-18,52;CL:0000542,3.25e-18,53;CL:0000051,3.25e-18,53;CL:0000785,3.02e-11,2;CL:0000955,3.02e-11,2;CL:0000818,3.02e-11,2;CL:0000954,3.02e-11,2;CL:0000816,3.02e-11,2;CL:0002032,1.66e-09,161;CL:0000837,1.66e-09,161;CL:0000037,4.31e-09,168;CL:0000738,6.18e-09,136;CL:0000988,1.32e-08,177;CL:0002087,3.46e-08,115;CL:0000817,6.34e-08,3;CL:0000623,7.26e-08,3;CL:0000825,7.26e-08,3;CL:0002031,7.79e-08,120;CL:0000767,8.29e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000954;3.02e-11;2!CL:0000051;1.35e-08;53 | |||
|ontology_enrichment_disease=DOID:0060060!6.52e-08!1;DOID:0060061!6.52e-08!1;DOID:8691!6.52e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.18e-10!15;UBERON:0000179!1.18e-10!15;UBERON:0000463!1.18e-10!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;8.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,7.76e-08,3;UBERON:0004854,7.76e-08,3;UBERON:0009034,7.76e-08,3;UBERON:0002095,7.76e-08,3;UBERON:0004782,7.76e-08,3;UBERON:0003281,7.76e-08,3;UBERON:0009664,7.76e-08,3;UBERON:0002296,7.76e-08,3;UBERON:0005602,7.76e-08,3;UBERON:0001179,7.76e-08,3;UBERON:0006293,7.76e-08,3 | |||
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|short_description=p@chr2:123497849..123497884,+ | |||
}} | }} |
Latest revision as of 00:01, 29 July 2015
Short description: | p@chr2:123497849..123497884, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:123497849..123497884, + |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 4.22e-21 | 1 |
plasma cell | 4.22e-21 | 1 |
plasmablast | 4.22e-21 | 1 |
lymphocyte of B lineage | 5.82e-21 | 24 |
pro-B cell | 5.82e-21 | 24 |
lymphoid lineage restricted progenitor cell | 1.44e-18 | 52 |
lymphocyte | 3.25e-18 | 53 |
common lymphoid progenitor | 3.25e-18 | 53 |
mature B cell | 3.02e-11 | 2 |
pre-B-II cell | 3.02e-11 | 2 |
transitional stage B cell | 3.02e-11 | 2 |
small pre-B-II cell | 3.02e-11 | 2 |
immature B cell | 3.02e-11 | 2 |
hematopoietic oligopotent progenitor cell | 1.66e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.66e-09 | 161 |
hematopoietic stem cell | 4.31e-09 | 168 |
leukocyte | 6.18e-09 | 136 |
hematopoietic cell | 1.32e-08 | 177 |
nongranular leukocyte | 3.46e-08 | 115 |
precursor B cell | 6.34e-08 | 3 |
natural killer cell | 7.26e-08 | 3 |
pro-NK cell | 7.26e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 7.79e-08 | 120 |
basophil | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
spleen | 7.76e-08 | 3 |
gastrointestinal system mesentery | 7.76e-08 | 3 |
stomach region | 7.76e-08 | 3 |
mesentery | 7.76e-08 | 3 |
gastrointestinal system serosa | 7.76e-08 | 3 |
mesentery of stomach | 7.76e-08 | 3 |
gut mesentery | 7.76e-08 | 3 |
dorsal mesentery | 7.76e-08 | 3 |
dorsal mesogastrium | 7.76e-08 | 3 |
peritoneal cavity | 7.76e-08 | 3 |
spleen primordium | 7.76e-08 | 3 |