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FFCP PHASE1:Mm9::chr1:89470400..89470446,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=53972
|EntrezGene=53972
|HGNC=
|HGNC=
|MCL_coexpression_id=166
|MCL_coexpression_id=166
|TSSclassifier=NA
|UniProt=E9QK62,Q8CHT1
|UniProt=E9QK62,Q8CHT1
|association_with_transcript=0bp_to_ENSMUST00000068681,NM_001111314,uc007bwy.2_5end
|association_with_transcript=0bp_to_ENSMUST00000068681,NM_001111314,uc007bwy.2_5end
|cluster_id=chr1:89470400..89470446,-
|description=CAGE_peak_2_at_Ngef_5end
|description=CAGE_peak_2_at_Ngef_5end
|id=chr1:89470400..89470446,-
|id=chr1:89470400..89470446,-
|ontology_enrichment_celltype=CL:0002563!7.32e-07!9;CL:0002251!7.32e-07!9
|ontology_enrichment_celltype=CL:0002563!7.32e-07!9;CL:0002251!7.32e-07!9
|ontology_enrichment_celltype_v019_2=CL:0002563,1.17e-07,9;CL:0002251,1.17e-07,9;CL:0000066,3.88e-07,25;CL:0000223,5.85e-07,20
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001007!3.80e-24!128;UBERON:0001555!3.80e-24!128;UBERON:0007026!3.80e-24!128;UBERON:0004119!9.84e-24!130;UBERON:0000925!9.84e-24!130;UBERON:0006595!9.84e-24!130;UBERON:0004921!5.58e-23!126;UBERON:0004185!5.58e-23!126;UBERON:0000160!9.73e-22!43;UBERON:0005409!3.36e-21!59;UBERON:0009854!9.24e-14!23;UBERON:0009856!9.24e-14!23;UBERON:0002107!4.37e-13!22;UBERON:0007499!4.37e-13!22;UBERON:0006925!4.37e-13!22;UBERON:0009497!4.37e-13!22;UBERON:0000015!4.37e-13!22;UBERON:0002423!4.37e-13!22;UBERON:0006235!4.37e-13!22;UBERON:0008835!4.37e-13!22;UBERON:0003894!4.37e-13!22;UBERON:0004161!4.37e-13!22;UBERON:0008836!4.37e-13!22;UBERON:0002365!6.36e-12!25;UBERON:0002330!6.36e-12!25;UBERON:0000344!2.94e-10!15;UBERON:0005177!1.02e-09!85;UBERON:0001242!2.75e-09!13;UBERON:0000060!2.75e-09!13;UBERON:0001262!2.75e-09!13;UBERON:0004786!2.75e-09!13;UBERON:0009569!5.68e-09!66;UBERON:0000466!1.18e-08!79;UBERON:0005172!3.76e-08!49;UBERON:0005173!3.76e-08!49;UBERON:0002417!3.76e-08!49;UBERON:0000916!3.76e-08!49;UBERON:0001041!1.11e-07!92;UBERON:0000077!2.56e-07!97;UBERON:0003350!7.32e-07!9;UBERON:0004808!7.32e-07!9;UBERON:0001277!7.32e-07!9
|ontology_enrichment_uberon=UBERON:0001007!3.80e-24!128;UBERON:0001555!3.80e-24!128;UBERON:0007026!3.80e-24!128;UBERON:0004119!9.84e-24!130;UBERON:0000925!9.84e-24!130;UBERON:0006595!9.84e-24!130;UBERON:0004921!5.58e-23!126;UBERON:0004185!5.58e-23!126;UBERON:0000160!9.73e-22!43;UBERON:0005409!3.36e-21!59;UBERON:0009854!9.24e-14!23;UBERON:0009856!9.24e-14!23;UBERON:0002107!4.37e-13!22;UBERON:0007499!4.37e-13!22;UBERON:0006925!4.37e-13!22;UBERON:0009497!4.37e-13!22;UBERON:0000015!4.37e-13!22;UBERON:0002423!4.37e-13!22;UBERON:0006235!4.37e-13!22;UBERON:0008835!4.37e-13!22;UBERON:0003894!4.37e-13!22;UBERON:0004161!4.37e-13!22;UBERON:0008836!4.37e-13!22;UBERON:0002365!6.36e-12!25;UBERON:0002330!6.36e-12!25;UBERON:0000344!2.94e-10!15;UBERON:0005177!1.02e-09!85;UBERON:0001242!2.75e-09!13;UBERON:0000060!2.75e-09!13;UBERON:0001262!2.75e-09!13;UBERON:0004786!2.75e-09!13;UBERON:0009569!5.68e-09!66;UBERON:0000466!1.18e-08!79;UBERON:0005172!3.76e-08!49;UBERON:0005173!3.76e-08!49;UBERON:0002417!3.76e-08!49;UBERON:0000916!3.76e-08!49;UBERON:0001041!1.11e-07!92;UBERON:0000077!2.56e-07!97;UBERON:0003350!7.32e-07!9;UBERON:0004808!7.32e-07!9;UBERON:0001277!7.32e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.91e-22,31;UBERON:0001007,9.56e-19,116;UBERON:0001555,9.56e-19,116;UBERON:0007026,9.56e-19,116;UBERON:0005409,3.48e-18,47;UBERON:0004119,5.69e-18,118;UBERON:0000925,5.69e-18,118;UBERON:0006595,5.69e-18,118;UBERON:0004921,1.27e-17,114;UBERON:0009854,1.40e-15,23;UBERON:0009856,1.40e-15,23;UBERON:0002107,8.35e-15,22;UBERON:0007499,8.35e-15,22;UBERON:0006925,8.35e-15,22;UBERON:0009497,8.35e-15,22;UBERON:0000015,8.35e-15,22;UBERON:0002423,8.35e-15,22;UBERON:0006235,8.35e-15,22;UBERON:0008835,8.35e-15,22;UBERON:0003894,8.35e-15,22;UBERON:0004161,8.35e-15,22;UBERON:0008836,8.35e-15,22;UBERON:0002365,6.24e-13,25;UBERON:0002330,6.24e-13,25;UBERON:0000344,1.48e-11,15;UBERON:0001242,1.93e-10,13;UBERON:0001262,1.93e-10,13;UBERON:0004786,1.93e-10,13;UBERON:0003350,1.17e-07,9;UBERON:0004808,1.17e-07,9;UBERON:0001277,1.17e-07,9;UBERON:0005177,1.77e-07,79;UBERON:0003929,9.00e-07,55
|phase1_expression=0,7.32848356042658,12.739978702907,38.1104906246606,44.5797199652249,7.55456723603504,5.84031601488814,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25216450755349,0,0,9.91953021319121,10.3234176480227,5.16808767703518,7.75371593086335,6.46413698057667,26.0332084655232,18.146169342715,4.21287970245079,0,0,0,23.6858328196045,19.4494535069436,21.4377824075488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,11.3047150593654,4.30211938490693,14.9593693415705,34.5410042648203,14.9448576012964,30.4658283226188,7.3031098468511,0,0,0,0,0,0,0,0.865964164044856,1.77351905832569,0,11.3042040921869,0,0,0.173485326766136,0.304465478312141,0.461230994512117,0.301445281105245,0.117588707135705,0,1.73036477414062,0,0,0,0,0,20.5030937339934,0,0,18.13745091981,0,0,0,0,0,0,0,0,0,0,0.81471491080253,0.248813941220186,0.758168275301024,0,0,0,0,0.452114453507145,0,0.12811372028485,0,0,0,0,0,0,0,0.696504333044333,4.11564272815887,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0,0.16455984991348,0,0,0,0,0,0,0,37.0069036941854,12.6936271998501,0,1.16118335930219,10.6959992897337,20.3700359869576,16.4559752445204,16.9300807240178,18.0321043386914,20.9167672499494,24.1281800448259,29.6445143341315,25.1503672383665,28.7622210769351,25.7204279350886,22.5029638777435,0,0.342745537829186,0,0.814605311381257,2.52138233317913,1.68325967736765,6.0707075639287,12.251642282307,7.69293766422737,9.00799296629144,20.7516838961004,2.16898637430922,2.75182593158484,4.27238013531222,5.07150303471257,11.8176808278684,15.2775511068852,12.9463261852865,17.1863340381537,16.4736847912849,23.0029130443767,28.6548529704748,22.7787501373629,21.4692046255045,7.71408878144222,11.0962009913574,4.61882975416512,0,0.162964976442026,0.339490171550376,2.11221223459652,2.01007508930179,2.61848004974615,1.95133647857799,1.26108115284953,0.664394068946325,0.797273843287435,2.62181303545181,0.518054945597687,1.88043776155965,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55492153374884,1.42452482933804,0.81443479676788,2.63952196756057,0,4.12727081463468,5.74414758233027,6.03536255218874,6.496641643377,5.84126781093462,5.68542244970086,9.81541069589265,6.77345018930971,2.21225730555071,3.16255825724996,2.06271086496374,0,0,0,0,0,0,0,0.608929898229199,0.469343416127421,0,0,1.31909002353184,1.93757312035087,1.56813604813205,0.477489376012546,0.820704498725306,29.1480836629851,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.790839983952838,4.47302827679067,3.78018692876304,5.43629569637619,7.42432716737004,2.69728692769641,4.95920734352016,5.49687478166462,17.1091764745167,2.4853572523477,0,0,0,0,0.129159823477731,0,0,0.2604087696879,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,3.17422537061296,0,0,0,0.19318959403219,10.8855835761686,10.2564909589668,1.92931541171159,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,2.91728060481953,2.30574478890781,2.5738091183002,3.33370091702423,2.88449080134452,1.60459604795908,2.52697211763797,1.77435509923168,3.9611531691076,3.183811253976,3.00918216302886,3.15895079255873,2.85776214769844,2.20180219295225,3.08654752741928,2.47251540481984,2.06078488188156,4.4573002810104,2.30718548007139,2.38436189947321,3.19762116591123,2.35273451038327,2.70766745253365,3.10977553883713,4.20911538300549,2.58027816307137,2.80571135828869,3.08451047122853,2.46261205938909,3.27384834535751,2.63392630016142,2.70069255373598,0.249810577937946,3.04111090979031,2.79332370262788,0.382576664137687,0.220591419119515,0
|phase1_expression=0,7.32848356042658,12.739978702907,38.1104906246606,44.5797199652249,7.55456723603504,5.84031601488814,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25216450755349,0,0,9.91953021319121,10.3234176480227,5.16808767703518,7.75371593086335,6.46413698057667,26.0332084655232,18.146169342715,4.21287970245079,0,0,0,23.6858328196045,19.4494535069436,21.4377824075488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,11.3047150593654,4.30211938490693,14.9593693415705,34.5410042648203,14.9448576012964,30.4658283226188,7.3031098468511,0,0,0,0,0,0,0,0.865964164044856,1.77351905832569,0,11.3042040921869,0,0,0.173485326766136,0.304465478312141,0.461230994512117,0.301445281105245,0.117588707135705,0,1.73036477414062,0,0,0,0,0,20.5030937339934,0,0,18.13745091981,0,0,0,0,0,0,0,0,0,0,0.81471491080253,0.248813941220186,0.758168275301024,0,0,0,0,0.452114453507145,0,0.12811372028485,0,0,0,0,0,0,0,0.696504333044333,4.11564272815887,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0,0.16455984991348,0,0,0,0,0,0,0,37.0069036941854,12.6936271998501,0,1.16118335930219,10.6959992897337,20.3700359869576,16.4559752445204,16.9300807240178,18.0321043386914,20.9167672499494,24.1281800448259,29.6445143341315,25.1503672383665,28.7622210769351,25.7204279350886,22.5029638777435,0,0.342745537829186,0,0.814605311381257,2.52138233317913,1.68325967736765,6.0707075639287,12.251642282307,7.69293766422737,9.00799296629144,20.7516838961004,2.16898637430922,2.75182593158484,4.27238013531222,5.07150303471257,11.8176808278684,15.2775511068852,12.9463261852865,17.1863340381537,16.4736847912849,23.0029130443767,28.6548529704748,22.7787501373629,21.4692046255045,7.71408878144222,11.0962009913574,4.61882975416512,0,0.162964976442026,0.339490171550376,2.11221223459652,2.01007508930179,2.61848004974615,1.95133647857799,1.26108115284953,0.664394068946325,0.797273843287435,2.62181303545181,0.518054945597687,1.88043776155965,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55492153374884,1.42452482933804,0.81443479676788,2.63952196756057,0,4.12727081463468,5.74414758233027,6.03536255218874,6.496641643377,5.84126781093462,5.68542244970086,9.81541069589265,6.77345018930971,2.21225730555071,3.16255825724996,2.06271086496374,0,0,0,0,0,0,0,0.608929898229199,0.469343416127421,0,0,1.31909002353184,1.93757312035087,1.56813604813205,0.477489376012546,0.820704498725306,29.1480836629851,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.790839983952838,4.47302827679067,3.78018692876304,5.43629569637619,7.42432716737004,2.69728692769641,4.95920734352016,5.49687478166462,17.1091764745167,2.4853572523477,0,0,0,0,0.129159823477731,0,0,0.2604087696879,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,3.17422537061296,0,0,0,0.19318959403219,10.8855835761686,10.2564909589668,1.92931541171159,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,2.91728060481953,2.30574478890781,2.5738091183002,3.33370091702423,2.88449080134452,1.60459604795908,2.52697211763797,1.77435509923168,3.9611531691076,3.183811253976,3.00918216302886,3.15895079255873,2.85776214769844,2.20180219295225,3.08654752741928,2.47251540481984,2.06078488188156,4.4573002810104,2.30718548007139,2.38436189947321,3.19762116591123,2.35273451038327,2.70766745253365,3.10977553883713,4.20911538300549,2.58027816307137,2.80571135828869,3.08451047122853,2.46261205938909,3.27384834535751,2.63392630016142,2.70069255373598,0.249810577937946,3.04111090979031,2.79332370262788,0.382576664137687,0.220591419119515,0
|short_description=p2@Ngef
|short_description=p2@Ngef
}}
}}

Latest revision as of 18:16, 1 October 2015

Short description:p2@Ngef
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ngef_5end
Coexpression cluster:MCL_coexpression_mm9:166
Association with transcript: 0bp_to_ENSMUST00000068681, NM_001111314, uc007bwy.2_5end
EntrezGene:Ngef
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ngef

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I57.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I612.74
CD326+ enterocyte, pool1.CNhs13542.11848-124I338.11
CD326+ enterocyte, pool2.CNhs13197.11849-124I444.58
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.84
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D210.32
GP2+ M cell, pool1.CNhs13228.11845-124H95.17
GP2+ M cell, pool2.CNhs13231.11846-124I17.75
GP2+ M cell, pool3.CNhs13240.11847-124I26.46
Ileum epithelium, pool1.CNhs13199.10252-104B926.03
Ileum epithelium, pool2.CNhs13232.10253-104C118.15
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F523.69
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F619.45
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F721.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.30
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C414.96
Mouse hepatocyte, donor3.CNhs12615.11637-122C834.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F414.94
Mouse hepatocyte, donor8.CNhs13091.11824-124F630.47
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.30
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H420.50
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H718.14
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B54.12
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I337.01
intestine, adult.CNhs10496.178-9A312.69
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D810.70
intestine, embryo E16.CNhs10585.463-22H420.37
intestine, embryo E17.CNhs10582.482-18D316.46
intestine, embryo E18.CNhs10526.1289-20F716.93
intestine, neonate N00.CNhs11126.644-26D118.03
intestine, neonate N01.CNhs11192.1322-23E920.92
intestine, neonate N06.CNhs11102.688-20B824.13
intestine, neonate N07.CNhs11095.720-20F229.64
intestine, neonate N10.CNhs11098.755-23A525.15
intestine, neonate N20.CNhs11187.827-18D128.76
intestine, neonate N25.CNhs11121.1352-25E325.72
intestine, neonate N30.CNhs11131.1384-42G122.50
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G71.68
kidney, neonate N10.CNhs11206.758-6D56.07
kidney, neonate N20.CNhs11113.832-19I112.25
kidney, neonate N25.CNhs11122.1353-25F37.69
kidney, neonate N30.CNhs11203.1385-42H19.01
liver, adult pregnant day01.CNhs10466.508-5B220.75
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H62.75
liver, embryo E14.CNhs10594.409-16E14.27
liver, embryo E15.CNhs10520.433-16D75.07
liver, embryo E16.CNhs10523.462-17F511.82
liver, embryo E17.CNhs10510.481-18A315.28
liver, embryo E18.CNhs10579.499-43G412.95
liver, neonate N00.CNhs11117.641-24F417.19
liver, neonate N03.CNhs11123.1345-25G216.47
liver, neonate N06.CNhs11101.684-20A823.00
liver, neonate N07.CNhs11103.716-20H228.65
liver, neonate N10.CNhs11115.751-24B922.78
liver, neonate N20.CNhs11220.823-25A321.47
liver, neonate N25.CNhs11198.1368-26H17.71
liver, neonate N30.CNhs11106.1382-42D111.10
lung, adult.CNhs10474.28-22B14.62
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A42.62
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I72.55
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.13
pancreas, embryo E15.CNhs11042.1556-45F25.74
pancreas, embryo E16.CNhs11003.460-26E56.04
pancreas, embryo E17.CNhs10599.1558-45G36.50
pancreas, embryo E18.CNhs10580.1535-43I75.84
pancreas, neonate N00.CNhs11105.645-26G95.69
pancreas, neonate N01.CNhs11138.1531-43D79.82
pancreas, neonate N02.CNhs11139.1539-43D86.77
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H31.57
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I129.15
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G84.47
stomach, embryo E16.CNhs11022.459-17D43.78
stomach, embryo E17.CNhs11006.1035-18D55.44
stomach, embryo E18.CNhs10999.1286-20C67.42
stomach, neonate N03.CNhs11193.1340-24B82.70
stomach, neonate N07.CNhs11210.718-18A94.96
stomach, neonate N25.CNhs11104.1355-25E45.50
stomach, neonate N30.CNhs11134.1386-42I117.11
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F510.89
uterus, adult.CNhs10509.92-27E510.26
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
intestinal epithelial cell1.17e-079
epithelial cell of alimentary canal1.17e-079
epithelial cell3.88e-0725
endodermal cell5.85e-0720

Uber anatomy
Ontology termp-valuen
intestine9.91e-2231
digestive system9.56e-19116
digestive tract9.56e-19116
primitive gut9.56e-19116
gastrointestinal system3.48e-1847
endoderm-derived structure5.69e-18118
endoderm5.69e-18118
presumptive endoderm5.69e-18118
subdivision of digestive tract1.27e-17114
digestive tract diverticulum1.40e-1523
sac1.40e-1523
liver8.35e-1522
epithelial sac8.35e-1522
digestive gland8.35e-1522
epithelium of foregut-midgut junction8.35e-1522
anatomical boundary8.35e-1522
hepatobiliary system8.35e-1522
foregut-midgut junction8.35e-1522
hepatic diverticulum8.35e-1522
liver primordium8.35e-1522
septum transversum8.35e-1522
liver bud8.35e-1522
exocrine gland6.24e-1325
exocrine system6.24e-1325
mucosa1.48e-1115
intestinal mucosa1.93e-1013
wall of intestine1.93e-1013
gastrointestinal system mucosa1.93e-1013
epithelium of mucosa1.17e-079
gastrointestinal system epithelium1.17e-079
intestinal epithelium1.17e-079
trunk region element1.77e-0779
gut epithelium9.00e-0755
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