FFCP PHASE1:Mm9::chr3:132292908..132292927,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |MCL_coexpression_id=58 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:132292908..132292927,+ | |||
|description=CAGE_peak_at_chr3:132292908..132292927,+ | |description=CAGE_peak_at_chr3:132292908..132292927,+ | ||
|id=chr3:132292908..132292927,+ | |id=chr3:132292908..132292927,+ | ||
|ontology_enrichment_celltype=CL:0000239!2.07e-21!6;CL:0000677!2.07e-21!6;CL:0000212!2.07e-21!6;CL:0000584!2.07e-21!6;CL:0002563!1.23e-18!9;CL:0002251!1.23e-18!9;CL:0000075!2.84e-18!7;CL:0000066!6.64e-13!25;CL:0000473!3.07e-12!3;CL:0000627!3.07e-12!3;CL:0000682!3.07e-12!3;CL:0002076!7.92e-11!15;CL:0000223!6.79e-08!20 | |ontology_enrichment_celltype=CL:0000239!2.07e-21!6;CL:0000677!2.07e-21!6;CL:0000212!2.07e-21!6;CL:0000584!2.07e-21!6;CL:0002563!1.23e-18!9;CL:0002251!1.23e-18!9;CL:0000075!2.84e-18!7;CL:0000066!6.64e-13!25;CL:0000473!3.07e-12!3;CL:0000627!3.07e-12!3;CL:0000682!3.07e-12!3;CL:0002076!7.92e-11!15;CL:0000223!6.79e-08!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.42e-20,3;CL:0000239,1.56e-17,6;CL:0000677,1.56e-17,6;CL:0000584,1.56e-17,6;CL:0000075,4.50e-15,7;CL:0000066,2.64e-12,25;CL:0002563,8.78e-12,9;CL:0002251,8.78e-12,9;CL:0000473,3.82e-09,7;CL:0002076,3.79e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.42e-37!15;UBERON:0001242!1.27e-30!13;UBERON:0000060!1.27e-30!13;UBERON:0001262!1.27e-30!13;UBERON:0004786!1.27e-30!13;UBERON:0000160!1.90e-25!43;UBERON:0004923!2.52e-22!24;UBERON:0003350!1.23e-18!9;UBERON:0004808!1.23e-18!9;UBERON:0001277!1.23e-18!9;UBERON:0005409!1.44e-17!59;UBERON:0000485!4.34e-15!11;UBERON:0000331!6.64e-11!3;UBERON:0002116!6.64e-11!3;UBERON:0001204!6.64e-11!3;UBERON:0001168!6.64e-11!3;UBERON:0001962!3.41e-08!2;UBERON:0001961!3.41e-08!2;UBERON:0001744!3.41e-08!2;UBERON:0001007!4.55e-08!128;UBERON:0001555!4.55e-08!128;UBERON:0007026!4.55e-08!128;UBERON:0004119!6.99e-08!130;UBERON:0000925!6.99e-08!130;UBERON:0006595!6.99e-08!130 | |ontology_enrichment_uberon=UBERON:0000344!3.42e-37!15;UBERON:0001242!1.27e-30!13;UBERON:0000060!1.27e-30!13;UBERON:0001262!1.27e-30!13;UBERON:0004786!1.27e-30!13;UBERON:0000160!1.90e-25!43;UBERON:0004923!2.52e-22!24;UBERON:0003350!1.23e-18!9;UBERON:0004808!1.23e-18!9;UBERON:0001277!1.23e-18!9;UBERON:0005409!1.44e-17!59;UBERON:0000485!4.34e-15!11;UBERON:0000331!6.64e-11!3;UBERON:0002116!6.64e-11!3;UBERON:0001204!6.64e-11!3;UBERON:0001168!6.64e-11!3;UBERON:0001962!3.41e-08!2;UBERON:0001961!3.41e-08!2;UBERON:0001744!3.41e-08!2;UBERON:0001007!4.55e-08!128;UBERON:0001555!4.55e-08!128;UBERON:0007026!4.55e-08!128;UBERON:0004119!6.99e-08!130;UBERON:0000925!6.99e-08!130;UBERON:0006595!6.99e-08!130 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.78e-26,15;UBERON:0001242,2.70e-17,13;UBERON:0001262,2.70e-17,13;UBERON:0004786,2.70e-17,13;UBERON:0004923,4.25e-16,24;UBERON:0000160,2.07e-15,31;UBERON:0001962,2.26e-13,2;UBERON:0001961,2.26e-13,2;UBERON:0001744,2.26e-13,2;UBERON:0003350,8.78e-12,9;UBERON:0004808,8.78e-12,9;UBERON:0001277,8.78e-12,9;UBERON:0005409,7.55e-10,47;UBERON:0000485,1.11e-09,11;UBERON:0002465,3.19e-09,3;UBERON:0000331,4.24e-09,3;UBERON:0002116,4.24e-09,3;UBERON:0001204,4.24e-09,3;UBERON:0001168,4.24e-09,3;UBERON:0003199,1.53e-07,1;UBERON:0002108,4.87e-07,4 | |||
|phase1_expression=0,12.2141392673776,14.5599756604652,0.90739263392049,0.500895729946347,6.21153306073992,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3998863419011,2.52350209173887,16.0784949952206,12.9228598847722,17.8841123129288,0.190023419456374,1.00812051903972,5.09980174507201,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0.570676878337677,1.42358718463353,1.64698954724011,0.754005626400808,0,0.38992817423824,0,1.08069024937347,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,12.2141392673776,14.5599756604652,0.90739263392049,0.500895729946347,6.21153306073992,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3998863419011,2.52350209173887,16.0784949952206,12.9228598847722,17.8841123129288,0.190023419456374,1.00812051903972,5.09980174507201,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0.570676878337677,1.42358718463353,1.64698954724011,0.754005626400808,0,0.38992817423824,0,1.08069024937347,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:132292908..132292927,+ | |short_description=p@chr3:132292908..132292927,+ | ||
}} | }} |
Latest revision as of 01:34, 6 August 2015
Short description: | p@chr3:132292908..132292927, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:132292908..132292927, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.42e-20 | 3 |
brush border epithelial cell | 1.56e-17 | 6 |
gut absorptive cell | 1.56e-17 | 6 |
enterocyte | 1.56e-17 | 6 |
columnar/cuboidal epithelial cell | 4.50e-15 | 7 |
epithelial cell | 2.64e-12 | 25 |
intestinal epithelial cell | 8.78e-12 | 9 |
epithelial cell of alimentary canal | 8.78e-12 | 9 |
defensive cell | 3.82e-09 | 7 |
endo-epithelial cell | 3.79e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.78e-26 | 15 |
intestinal mucosa | 2.70e-17 | 13 |
wall of intestine | 2.70e-17 | 13 |
gastrointestinal system mucosa | 2.70e-17 | 13 |
organ component layer | 4.25e-16 | 24 |
intestine | 2.07e-15 | 31 |
gut-associated lymphoid tissue | 2.26e-13 | 2 |
mucosa-associated lymphoid tissue | 2.26e-13 | 2 |
lymphoid tissue | 2.26e-13 | 2 |
epithelium of mucosa | 8.78e-12 | 9 |
gastrointestinal system epithelium | 8.78e-12 | 9 |
intestinal epithelium | 8.78e-12 | 9 |
gastrointestinal system | 7.55e-10 | 47 |
simple columnar epithelium | 1.11e-09 | 11 |
lymphoid system | 3.19e-09 | 3 |
ileal mucosa | 4.24e-09 | 3 |
ileum | 4.24e-09 | 3 |
mucosa of small intestine | 4.24e-09 | 3 |
wall of small intestine | 4.24e-09 | 3 |
egg chamber | 1.53e-07 | 1 |
small intestine | 4.87e-07 | 4 |