FFCP PHASE1:Hg19::chr2:172967276..172967296,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:172967276..172967296,-
|short_description=p3@DLX2
|description=CAGE_peak_3_at_DLX2_5end
|association_with_transcript=181bp_to_NM_004405,uc002uhn.2,uc010zdx...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1746 | |EntrezGene=1746 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2915 | |HGNC=2915 | ||
|TSSclassifier=strong | |||
|UniProt=Q07687,Q53QU7 | |UniProt=Q07687,Q53QU7 | ||
|association_with_transcript=181bp_to_NM_004405,uc002uhn.2,uc010zdx.1_5end | |||
|cluster_id=chr2:172967276..172967296,- | |||
|coexpression_cluster_id=C101 | |||
|description=CAGE_peak_3_at_DLX2_5end | |||
|id=chr2:172967276..172967296,- | |||
|ontology_enrichment_celltype=CL:0000055!1.76e-16!180;CL:0000057!2.02e-10!75;CL:0002620!8.94e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.79e-09;23!CL:0002552;1.14e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.24e-09,23;CL:0002552,1.59e-08,5;CL:0000057,8.06e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!5.80e-09!239;DOID:162!1.22e-08!235;DOID:0050687!4.83e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002097!4.99e-10!40;UBERON:0002199!6.80e-09!45;UBERON:0002416!6.80e-09!45;UBERON:0003102!8.79e-09!95;UBERON:0000475!9.78e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.04e-09;41!UBERON:0002199;8.41e-08;46!UBERON:0002416;8.41e-08;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,7.16e-12,41;UBERON:0002199,5.91e-10,46;UBERON:0002416,5.91e-10,46;UBERON:0003102,1.10e-09,99;UBERON:0000165,5.23e-07,29;UBERON:0000930,5.23e-07,29 | |||
|phase1_expression=1.45342703416445,0.214100523890983,1.12763523276777,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0.246242116153576,0,0,0.572471974262113,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10799081706375,0.200544447470142,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0.236482229888585,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0,1.0843174571537,1.00267582127178,0.434539556882471,0,0.486634870302636,0,0,0,0.130979075497713,0,0.370784442784429,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0.436094052142534,0.993943903390637,0.379891534993739,0.397227542439656,0.573673241497627,1.06400514659507,0.560677600142307,0,0,0.311211035399766,0.404132016209064,0,0,0,0,0,0,0.597794722207204,0.117434498643765,0.161872944368132,0,1.22492502752936,3.4393608847295,2.06651562351531,2.37600571456411,3.95627086845691,0.910161361938026,0,0.505008341862199,0.375355559615893,2.21651292387346,3.95079858792754,5.51678032438235,1.65261864797256,0.226864366320042,5.56107870635472,1.2813443329114,1.69545520927649,3.90118424909723,0.721367704669072,1.54584324027377,1.8611685633159,3.03797398034279,3.50773218580315,1.7670364197088,0.368199594569197,0,4.61512470271599,3.22406714328449,1.69560592310488,0,0,0,0.121973706129595,0,0,0.10366105501537,0.252320850875628,0,0,0,1.38134921352481,0,0,0.473227200159376,0.842923450390509,0.482022059766964,0.882351781859152,0.435758888184812,0.71181185733329,0.404493924480493,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.343135620597051,1.53650399572076,1.1240175325762,1.00528972411631,0.462942225792648,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,3.57656445851882,0,0.531876233169741,1.04007436911366,1.54324424557285,1.41849132023278,5.59486575933809,0,0,0,0,0.355391948742546,0.791951872933429,0,0,0.099972991182057,0,0,0,0.479249710983165,1.14861935834114,1.42636905040718,0.868687840005475,2.4657158706046,0.716243852959582,0,0.197030760201927,0,0.128343036279748,2.54094624222463,1.30139853857622,2.31986643833309,0.837581326671744,3.82763250991898,0,0,0,0.36807447515742,0,0,0.623912584592421,3.03329280955175,0.788512075169673,0.117141414992713,0.902838299183157,0,0,1.32845119707087,1.10621501125022,0.0868836144680828,0,0,0,0,0,0,0,0,0.496215615637554,0.920771839728375,0.280660094433074,0.768834895534206,1.02341449813341,0,0,0.154209693802656,0.710246901252508,0.492762936082855,0,0.581051892299796,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0.431831832204279,3.08454505380579,0.270946437543853,0,0,0,0,0,0,0,0,0,0,2.7470839445503,2.80532299729999,1.14853107599234,1.95018073810956,0,0.096670718292122,0.616194468458578,0.614014698904518,0,0.107420244868274,0.435050081742686,0.0852266274161009,0.178064071293475,0,0.192190067365106,0,0,2.78907329578371,1.88887408098384,0.6970372701606,0,0,1.73986598415015,1.8532421910392,0.858749320451947,0,0,0,0.255897791311334,0,0.636406495851874,1.56989728039846,0,0,0,0,1.58510321173008,0.421258456238981,0.975267478179181,0.487426979262569,4.22600587027022,0.272999822815972,0.141405431953713,0,4.41092274836899,1.32687795048244,2.63070531152258,0,0,0,0.30982349809975,0.845086807596724,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0.288666338176536,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,11.2165274683847,0,1.22520107990516,0,0,3.34366663737546,1.27541018183058,0,0,1.48171507906718,0,0,0,0.47003968731907,0,0.338583555603207,2.40882112655549,1.41259795033733,0,0.687010689511529,0,0,0,0.976940477010201,0,3.69262196843137,0.270455678475983,0,1.4098700508785,0,0,3.6408156524854,0,0,0,0,0,0.994147647766298,0,0.445234820091624,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0.511572370226872,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0.341380344856499,0.254253650292766,0.236387681767936,0.689486746482929,0.874813840149763,1.04174996959975,0,0.241192877250816,0,0,0,1.09692698576986,0.10893846351899,1.39423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0.676786981851542,1.56850027454192,1.84603745673427,0,0,0.421996129056054,0,0,1.51472047819464,0,0,0,0.889563386041866,1.97702302314405,1.25306339406546,0.067401132980677,0,0,0.182454789215666,0,0.485560759068186,0,0,3.0607276163049,0,2.1045278718029,5.39178595265685,1.99396161812156,6.61983911750998,4.70899377610838,3.58417289318877,0.284609546029793,0,0,0.489961987071888,0.261177619741208,0,1.37588825977293,0,0,0,0,0.176512253383001,0,0.411125773940253,2.78200456384186,0.696418755514666,0,0,0,1.19885765749278,0.144090417154106,3.77970767347522,0.857974989309823,0,0.99402028452346,0.942776138467182,0.271808412147228,0.313808538937,3.97793048781655,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0.720599767084807,2.32991899054908,0,0,0.0674035438541849,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.728994679896296,3.01891218839339,0,0,0.316801009558219,0,0.191915197319445,0,0,1.27134268827375,0,0,0.326587360109409,0,0.164185041498678,1.36310417428337,1.24643300672138,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0.366078794705889,0.3755727921195,0,0,0,0,1.37478448758317,0.758245587708239,0.856396000634902,0,0,0.144921028610825,0,0,0,0,0.50313580350515,0,0,0.151230923763239,0.621748802331122,0,0,0,0,0,0,0,0,0,0.406870733204662,0.181848659202559,0,0,0,0,0,0.673498977531838,0,0,1.07220795687463,0.260994291965212,1.58694147858591,0.463044948647668,0,1.07453304648892,1.23520578864389,0.219284049578707,0.353378291891762,0.578742114812744,0.337884881306145,1.28120759293973,1.0362910251936,1.82315973706429,0.414775308455192,0,0,0,3.27609848846413,0.245772908753719,0,0,0.106691729694141,0,2.83757976783418,0.736423801007363,0.279759015438889,1.24415452006595,0,8.51816010033786,0.786329709279482,0,1.52759276958623,0,1.98297222814403,0,1.90802610392051,0,0,8.46422264857641,0,0.256916900385838,0,0,0.82046545696302,1.76450187355203,0.760729777106397,0.484426936895553,0,0.0981477185010256,0.353909170043221,0.550285795565037,2.19498765685643,0.381382095467167,3.4517996303005,1.98916222116275,0,0.80682027481408,0,0,0.49131575253029,0.591424344868181,0.405225507710368,0.781078098613847,0.413373593002368,0.507326481551255,2.7348740450911,0,0,12.8386008382523,0.383287282918786,0,0,0,0,0,0.115233987555779,0.342976018874837,0,0.526182188502793,0,0,0,0.157115589916002,0,0,0.647782773655864,0,0,0.316027223465453,13.01903964123,0.347716544605159,0.801711364730253,2.48659396995644,0.85359238546975,1.38251932362818,0,1.18332000730565,1.36341447614652,0,0.4582137370881,0.31020638566432,0.955538938977433,0,0,0,0,0,0,0.971421986118279,9.59151800194633,48.7429399145352,0.118920090777569,0,0,0.452888530700021,0,0.218559560503957,0,0,0.471353094203252,0,0,0,3.0586880643807,0,0,0,0,1.05868461514708,0.0802413666891683,0,0,0,9.15075060720471,0.815897882290976,0.436350690340377,0.5290268405154,0,0,0,0.504665699340316,0.109265571963696,0,0,0,0.18378979906969,0,0,0,0,0.20686599172379,0,0.476128862927481,0.0645889098360061,0.124149428591716,0,0.25458863311266,0,0,0,0,0,0,0.732629417498771,0.106727345877715,1.9307228228694,0.269475606319761,0,0,0,0,0,0 | |phase1_expression=1.45342703416445,0.214100523890983,1.12763523276777,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0.246242116153576,0,0,0.572471974262113,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10799081706375,0.200544447470142,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0.236482229888585,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0,1.0843174571537,1.00267582127178,0.434539556882471,0,0.486634870302636,0,0,0,0.130979075497713,0,0.370784442784429,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0.436094052142534,0.993943903390637,0.379891534993739,0.397227542439656,0.573673241497627,1.06400514659507,0.560677600142307,0,0,0.311211035399766,0.404132016209064,0,0,0,0,0,0,0.597794722207204,0.117434498643765,0.161872944368132,0,1.22492502752936,3.4393608847295,2.06651562351531,2.37600571456411,3.95627086845691,0.910161361938026,0,0.505008341862199,0.375355559615893,2.21651292387346,3.95079858792754,5.51678032438235,1.65261864797256,0.226864366320042,5.56107870635472,1.2813443329114,1.69545520927649,3.90118424909723,0.721367704669072,1.54584324027377,1.8611685633159,3.03797398034279,3.50773218580315,1.7670364197088,0.368199594569197,0,4.61512470271599,3.22406714328449,1.69560592310488,0,0,0,0.121973706129595,0,0,0.10366105501537,0.252320850875628,0,0,0,1.38134921352481,0,0,0.473227200159376,0.842923450390509,0.482022059766964,0.882351781859152,0.435758888184812,0.71181185733329,0.404493924480493,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.343135620597051,1.53650399572076,1.1240175325762,1.00528972411631,0.462942225792648,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,3.57656445851882,0,0.531876233169741,1.04007436911366,1.54324424557285,1.41849132023278,5.59486575933809,0,0,0,0,0.355391948742546,0.791951872933429,0,0,0.099972991182057,0,0,0,0.479249710983165,1.14861935834114,1.42636905040718,0.868687840005475,2.4657158706046,0.716243852959582,0,0.197030760201927,0,0.128343036279748,2.54094624222463,1.30139853857622,2.31986643833309,0.837581326671744,3.82763250991898,0,0,0,0.36807447515742,0,0,0.623912584592421,3.03329280955175,0.788512075169673,0.117141414992713,0.902838299183157,0,0,1.32845119707087,1.10621501125022,0.0868836144680828,0,0,0,0,0,0,0,0,0.496215615637554,0.920771839728375,0.280660094433074,0.768834895534206,1.02341449813341,0,0,0.154209693802656,0.710246901252508,0.492762936082855,0,0.581051892299796,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0.431831832204279,3.08454505380579,0.270946437543853,0,0,0,0,0,0,0,0,0,0,2.7470839445503,2.80532299729999,1.14853107599234,1.95018073810956,0,0.096670718292122,0.616194468458578,0.614014698904518,0,0.107420244868274,0.435050081742686,0.0852266274161009,0.178064071293475,0,0.192190067365106,0,0,2.78907329578371,1.88887408098384,0.6970372701606,0,0,1.73986598415015,1.8532421910392,0.858749320451947,0,0,0,0.255897791311334,0,0.636406495851874,1.56989728039846,0,0,0,0,1.58510321173008,0.421258456238981,0.975267478179181,0.487426979262569,4.22600587027022,0.272999822815972,0.141405431953713,0,4.41092274836899,1.32687795048244,2.63070531152258,0,0,0,0.30982349809975,0.845086807596724,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0.288666338176536,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,11.2165274683847,0,1.22520107990516,0,0,3.34366663737546,1.27541018183058,0,0,1.48171507906718,0,0,0,0.47003968731907,0,0.338583555603207,2.40882112655549,1.41259795033733,0,0.687010689511529,0,0,0,0.976940477010201,0,3.69262196843137,0.270455678475983,0,1.4098700508785,0,0,3.6408156524854,0,0,0,0,0,0.994147647766298,0,0.445234820091624,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0.511572370226872,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0.341380344856499,0.254253650292766,0.236387681767936,0.689486746482929,0.874813840149763,1.04174996959975,0,0.241192877250816,0,0,0,1.09692698576986,0.10893846351899,1.39423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0.676786981851542,1.56850027454192,1.84603745673427,0,0,0.421996129056054,0,0,1.51472047819464,0,0,0,0.889563386041866,1.97702302314405,1.25306339406546,0.067401132980677,0,0,0.182454789215666,0,0.485560759068186,0,0,3.0607276163049,0,2.1045278718029,5.39178595265685,1.99396161812156,6.61983911750998,4.70899377610838,3.58417289318877,0.284609546029793,0,0,0.489961987071888,0.261177619741208,0,1.37588825977293,0,0,0,0,0.176512253383001,0,0.411125773940253,2.78200456384186,0.696418755514666,0,0,0,1.19885765749278,0.144090417154106,3.77970767347522,0.857974989309823,0,0.99402028452346,0.942776138467182,0.271808412147228,0.313808538937,3.97793048781655,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0.720599767084807,2.32991899054908,0,0,0.0674035438541849,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.728994679896296,3.01891218839339,0,0,0.316801009558219,0,0.191915197319445,0,0,1.27134268827375,0,0,0.326587360109409,0,0.164185041498678,1.36310417428337,1.24643300672138,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0.366078794705889,0.3755727921195,0,0,0,0,1.37478448758317,0.758245587708239,0.856396000634902,0,0,0.144921028610825,0,0,0,0,0.50313580350515,0,0,0.151230923763239,0.621748802331122,0,0,0,0,0,0,0,0,0,0.406870733204662,0.181848659202559,0,0,0,0,0,0.673498977531838,0,0,1.07220795687463,0.260994291965212,1.58694147858591,0.463044948647668,0,1.07453304648892,1.23520578864389,0.219284049578707,0.353378291891762,0.578742114812744,0.337884881306145,1.28120759293973,1.0362910251936,1.82315973706429,0.414775308455192,0,0,0,3.27609848846413,0.245772908753719,0,0,0.106691729694141,0,2.83757976783418,0.736423801007363,0.279759015438889,1.24415452006595,0,8.51816010033786,0.786329709279482,0,1.52759276958623,0,1.98297222814403,0,1.90802610392051,0,0,8.46422264857641,0,0.256916900385838,0,0,0.82046545696302,1.76450187355203,0.760729777106397,0.484426936895553,0,0.0981477185010256,0.353909170043221,0.550285795565037,2.19498765685643,0.381382095467167,3.4517996303005,1.98916222116275,0,0.80682027481408,0,0,0.49131575253029,0.591424344868181,0.405225507710368,0.781078098613847,0.413373593002368,0.507326481551255,2.7348740450911,0,0,12.8386008382523,0.383287282918786,0,0,0,0,0,0.115233987555779,0.342976018874837,0,0.526182188502793,0,0,0,0.157115589916002,0,0,0.647782773655864,0,0,0.316027223465453,13.01903964123,0.347716544605159,0.801711364730253,2.48659396995644,0.85359238546975,1.38251932362818,0,1.18332000730565,1.36341447614652,0,0.4582137370881,0.31020638566432,0.955538938977433,0,0,0,0,0,0,0.971421986118279,9.59151800194633,48.7429399145352,0.118920090777569,0,0,0.452888530700021,0,0.218559560503957,0,0,0.471353094203252,0,0,0,3.0586880643807,0,0,0,0,1.05868461514708,0.0802413666891683,0,0,0,9.15075060720471,0.815897882290976,0.436350690340377,0.5290268405154,0,0,0,0.504665699340316,0.109265571963696,0,0,0,0.18378979906969,0,0,0,0,0.20686599172379,0,0.476128862927481,0.0645889098360061,0.124149428591716,0,0.25458863311266,0,0,0,0,0,0,0.732629417498771,0.106727345877715,1.9307228228694,0.269475606319761,0,0,0,0,0,0 | ||
|short_description=p3@DLX2 | |||
}} | }} |
Latest revision as of 05:05, 18 September 2015
Short description: | p3@DLX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DLX2_5end |
Coexpression cluster: | C101_small_cerebellum_maxillary_colon_parietal_epididymis_merkel |
Association with transcript: | 181bp_to_NM_004405, uc002uhn.2, uc010zdx.1_5end |
EntrezGene: | DLX2 |
HGNC: | 2915 |
UniProt: | Q07687Q53QU7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.24e-09 | 23 |
fibroblast of gingiva | 1.59e-08 | 5 |
fibroblast | 8.06e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
skin of body | 7.16e-12 | 41 |
integument | 5.91e-10 | 46 |
integumental system | 5.91e-10 | 46 |
surface structure | 1.10e-09 | 99 |
mouth | 5.23e-07 | 29 |
stomodeum | 5.23e-07 | 29 |