FFCP PHASE1:Mm9::chr2:32390106..32390122,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=232 | |MCL_coexpression_id=232 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:32390106..32390122,+ | |||
|description=CAGE_peak_at_chr2:32390106..32390122,+ | |description=CAGE_peak_at_chr2:32390106..32390122,+ | ||
|id=chr2:32390106..32390122,+ | |id=chr2:32390106..32390122,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.02e-10!9;CL:0002251!2.02e-10!9;CL:0000066!8.35e-10!25;CL:0000075!9.81e-08!7;CL:0000239!4.50e-07!6;CL:0000677!4.50e-07!6;CL:0000212!4.50e-07!6;CL:0000584!4.50e-07!6;CL:0000063!5.46e-07!66 | |ontology_enrichment_celltype=CL:0002563!2.02e-10!9;CL:0002251!2.02e-10!9;CL:0000066!8.35e-10!25;CL:0000075!9.81e-08!7;CL:0000239!4.50e-07!6;CL:0000677!4.50e-07!6;CL:0000212!4.50e-07!6;CL:0000584!4.50e-07!6;CL:0000063!5.46e-07!66 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.92e-29,9;CL:0002251,2.92e-29,9;CL:0000066,2.98e-22,25;CL:0000239,2.70e-17,6;CL:0000677,2.70e-17,6;CL:0000584,2.70e-17,6;CL:0002076,3.92e-17,15;CL:0000223,5.04e-16,20;CL:0000075,8.40e-15,7;CL:0002250,7.64e-14,3;CL:0000682,1.18e-12,3;CL:0000624,4.51e-08,8;CL:0000791,3.45e-07,9;CL:0000789,3.45e-07,9;CL:0002420,3.45e-07,9;CL:0002419,3.45e-07,9;CL:0000790,3.45e-07,9;CL:0000215,8.61e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.78e-14!15;UBERON:0001242!1.16e-13!13;UBERON:0000060!1.16e-13!13;UBERON:0001262!1.16e-13!13;UBERON:0004786!1.16e-13!13;UBERON:0000485!2.45e-11!11;UBERON:0003350!2.02e-10!9;UBERON:0004808!2.02e-10!9;UBERON:0001277!2.02e-10!9;UBERON:0004923!3.97e-09!24;UBERON:0000160!6.99e-07!43 | |ontology_enrichment_uberon=UBERON:0000344!1.78e-14!15;UBERON:0001242!1.16e-13!13;UBERON:0000060!1.16e-13!13;UBERON:0001262!1.16e-13!13;UBERON:0004786!1.16e-13!13;UBERON:0000485!2.45e-11!11;UBERON:0003350!2.02e-10!9;UBERON:0004808!2.02e-10!9;UBERON:0001277!2.02e-10!9;UBERON:0004923!3.97e-09!24;UBERON:0000160!6.99e-07!43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.87e-30,13;UBERON:0001262,1.87e-30,13;UBERON:0004786,1.87e-30,13;UBERON:0003350,2.92e-29,9;UBERON:0004808,2.92e-29,9;UBERON:0001277,2.92e-29,9;UBERON:0000344,3.43e-26,15;UBERON:0000485,9.41e-24,11;UBERON:0000160,3.77e-20,31;UBERON:0004923,8.84e-16,24;UBERON:0005409,1.59e-12,47;UBERON:0001155,8.97e-09,2;UBERON:0000059,8.97e-09,2;UBERON:0003929,1.79e-07,55 | |||
|phase1_expression=0.160148847104794,2.09385244583617,1.36499771816861,2.72217790176147,4.00716583957078,0.16787927191189,1.63528848416868,1.03298658753261,0.281577444303333,0.234064526321993,0,0.0797721589953364,1.54080656938085,1.48614684112296,0,0,0,0,0,0,0,0,0,0.159992422793407,0.22940928106717,2.29692785646008,1.29228598847722,1.50829862880122,0.380046838912748,0.252030129759931,1.10865255327652,0.635030673459631,0,0,4.04392267651784,2.65975432573588,5.10423390655923,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,0,0,0,0,0,0,0.335565212115473,1.45072428402269,0.336093799142464,0.257259436035947,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0.908714319998209,2.79614772395106,4.34796733052517,0,0.679971333707751,0,0,0.896053774194671,0.140444420131752,0,0.779358013808606,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.301445281105245,0.117588707135705,0.125666591329675,0,0,0,0,0,0,1.86391761218122,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,1.32167513193519,0,0.213288250535234,0,0,0,0.22237804384487,0,1.42358718463353,0,0,0,0,0.898819408654221,0,0.199141273254367,0.189667900953082,0,0,0.203651327845314,0,0,0,0,0.156998727841375,0.370191491765402,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0.631016438832513,0,0.430846795465598,0.238968797952552,0.445597348164788,0,0,0.584511715822624,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0.614870295887855,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0,0,0,0,0,0,0.180938774784468,0,0,0.291480836629851,0,0,0,0,0,0.136694227721025,0.228778173206523,0,0.139951452323658,0,0,0,0.203319467126849,0,0,0,0,0,0,0.259229946583586,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0.201932899896295,0,0,0,0,0,0,0,0.179427713218951,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441182838239031,0 | |phase1_expression=0.160148847104794,2.09385244583617,1.36499771816861,2.72217790176147,4.00716583957078,0.16787927191189,1.63528848416868,1.03298658753261,0.281577444303333,0.234064526321993,0,0.0797721589953364,1.54080656938085,1.48614684112296,0,0,0,0,0,0,0,0,0,0.159992422793407,0.22940928106717,2.29692785646008,1.29228598847722,1.50829862880122,0.380046838912748,0.252030129759931,1.10865255327652,0.635030673459631,0,0,4.04392267651784,2.65975432573588,5.10423390655923,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,0,0,0,0,0,0,0.335565212115473,1.45072428402269,0.336093799142464,0.257259436035947,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0.908714319998209,2.79614772395106,4.34796733052517,0,0.679971333707751,0,0,0.896053774194671,0.140444420131752,0,0.779358013808606,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.301445281105245,0.117588707135705,0.125666591329675,0,0,0,0,0,0,1.86391761218122,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,1.32167513193519,0,0.213288250535234,0,0,0,0.22237804384487,0,1.42358718463353,0,0,0,0,0.898819408654221,0,0.199141273254367,0.189667900953082,0,0,0.203651327845314,0,0,0,0,0.156998727841375,0.370191491765402,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0.631016438832513,0,0.430846795465598,0.238968797952552,0.445597348164788,0,0,0.584511715822624,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0.614870295887855,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0,0,0,0,0,0,0.180938774784468,0,0,0.291480836629851,0,0,0,0,0,0.136694227721025,0.228778173206523,0,0.139951452323658,0,0,0,0.203319467126849,0,0,0,0,0,0,0.259229946583586,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0.201932899896295,0,0,0,0,0,0,0,0.179427713218951,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441182838239031,0 | ||
|short_description=p@chr2:32390106..32390122,+ | |short_description=p@chr2:32390106..32390122,+ | ||
}} | }} |
Latest revision as of 01:31, 5 August 2015
Short description: | p@chr2:32390106..32390122, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:32390106..32390122, + |
Coexpression cluster: | MCL_coexpression_mm9:232 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.92e-29 | 9 |
epithelial cell of alimentary canal | 2.92e-29 | 9 |
epithelial cell | 2.98e-22 | 25 |
brush border epithelial cell | 2.70e-17 | 6 |
gut absorptive cell | 2.70e-17 | 6 |
enterocyte | 2.70e-17 | 6 |
endo-epithelial cell | 3.92e-17 | 15 |
endodermal cell | 5.04e-16 | 20 |
columnar/cuboidal epithelial cell | 8.40e-15 | 7 |
intestinal crypt stem cell | 7.64e-14 | 3 |
M cell of gut | 1.18e-12 | 3 |
CD4-positive, alpha-beta T cell | 4.51e-08 | 8 |
mature alpha-beta T cell | 3.45e-07 | 9 |
alpha-beta T cell | 3.45e-07 | 9 |
immature T cell | 3.45e-07 | 9 |
mature T cell | 3.45e-07 | 9 |
immature alpha-beta T cell | 3.45e-07 | 9 |
barrier cell | 8.61e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.87e-30 | 13 |
wall of intestine | 1.87e-30 | 13 |
gastrointestinal system mucosa | 1.87e-30 | 13 |
epithelium of mucosa | 2.92e-29 | 9 |
gastrointestinal system epithelium | 2.92e-29 | 9 |
intestinal epithelium | 2.92e-29 | 9 |
mucosa | 3.43e-26 | 15 |
simple columnar epithelium | 9.41e-24 | 11 |
intestine | 3.77e-20 | 31 |
organ component layer | 8.84e-16 | 24 |
gastrointestinal system | 1.59e-12 | 47 |
colon | 8.97e-09 | 2 |
large intestine | 8.97e-09 | 2 |
gut epithelium | 1.79e-07 | 55 |