Personal tools

FFCP PHASE1:Mm9::chr10:90340066..90340070,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr10:90340066..90340070,+
|description=CAGE_peak_at_chr10:90340066..90340070,+
|description=CAGE_peak_at_chr10:90340066..90340070,+
|id=chr10:90340066..90340070,+
|id=chr10:90340066..90340070,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.97e-19!63;UBERON:0003056!2.41e-18!49;UBERON:0002346!3.50e-17!71;UBERON:0003075!3.50e-17!71;UBERON:0007284!3.50e-17!71;UBERON:0000955!5.59e-16!50;UBERON:0006238!5.59e-16!50;UBERON:0001049!6.26e-15!52;UBERON:0005068!6.26e-15!52;UBERON:0006241!6.26e-15!52;UBERON:0007135!6.26e-15!52;UBERON:0002616!7.33e-15!49;UBERON:0007811!2.58e-13!86;UBERON:0003080!4.64e-13!40;UBERON:0002021!8.73e-13!10;UBERON:0000411!8.73e-13!10;UBERON:0001950!8.73e-13!10;UBERON:0000153!2.94e-12!94;UBERON:0004121!3.77e-12!102;UBERON:0000924!3.77e-12!102;UBERON:0006601!3.77e-12!102;UBERON:0002780!4.42e-12!39;UBERON:0001890!4.42e-12!39;UBERON:0006240!4.42e-12!39;UBERON:0002619!2.35e-11!17;UBERON:0000073!1.45e-10!75;UBERON:0001016!1.45e-10!75;UBERON:0001017!2.72e-10!73;UBERON:0005743!2.72e-10!73;UBERON:0000956!3.00e-10!21;UBERON:0001869!3.00e-10!21;UBERON:0000203!3.00e-10!21;UBERON:0002791!6.17e-10!29;UBERON:0003528!6.17e-10!29;UBERON:0001893!6.17e-10!29;UBERON:0002020!8.00e-08!34
|ontology_enrichment_uberon=UBERON:0000033!1.97e-19!63;UBERON:0003056!2.41e-18!49;UBERON:0002346!3.50e-17!71;UBERON:0003075!3.50e-17!71;UBERON:0007284!3.50e-17!71;UBERON:0000955!5.59e-16!50;UBERON:0006238!5.59e-16!50;UBERON:0001049!6.26e-15!52;UBERON:0005068!6.26e-15!52;UBERON:0006241!6.26e-15!52;UBERON:0007135!6.26e-15!52;UBERON:0002616!7.33e-15!49;UBERON:0007811!2.58e-13!86;UBERON:0003080!4.64e-13!40;UBERON:0002021!8.73e-13!10;UBERON:0000411!8.73e-13!10;UBERON:0001950!8.73e-13!10;UBERON:0000153!2.94e-12!94;UBERON:0004121!3.77e-12!102;UBERON:0000924!3.77e-12!102;UBERON:0006601!3.77e-12!102;UBERON:0002780!4.42e-12!39;UBERON:0001890!4.42e-12!39;UBERON:0006240!4.42e-12!39;UBERON:0002619!2.35e-11!17;UBERON:0000073!1.45e-10!75;UBERON:0001016!1.45e-10!75;UBERON:0001017!2.72e-10!73;UBERON:0005743!2.72e-10!73;UBERON:0000956!3.00e-10!21;UBERON:0001869!3.00e-10!21;UBERON:0000203!3.00e-10!21;UBERON:0002791!6.17e-10!29;UBERON:0003528!6.17e-10!29;UBERON:0001893!6.17e-10!29;UBERON:0002020!8.00e-08!34
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.06e-28,10;UBERON:0000411,1.06e-28,10;UBERON:0001950,1.06e-28,10;UBERON:0000955,4.37e-23,47;UBERON:0006238,4.37e-23,47;UBERON:0000956,8.19e-22,21;UBERON:0001869,8.19e-22,21;UBERON:0000203,8.19e-22,21;UBERON:0002619,1.25e-21,17;UBERON:0002616,3.84e-20,46;UBERON:0001049,1.20e-17,52;UBERON:0005068,1.20e-17,52;UBERON:0006241,1.20e-17,52;UBERON:0007135,1.20e-17,52;UBERON:0000073,6.13e-17,54;UBERON:0003528,1.55e-15,29;UBERON:0002791,1.55e-15,29;UBERON:0001893,1.55e-15,29;UBERON:0001017,2.60e-14,73;UBERON:0002346,4.71e-14,64;UBERON:0003075,4.71e-14,64;UBERON:0007284,4.71e-14,64;UBERON:0002780,6.18e-14,39;UBERON:0001890,6.18e-14,39;UBERON:0006240,6.18e-14,39;UBERON:0001016,6.92e-14,75;UBERON:0003080,1.48e-13,40;UBERON:0002020,4.17e-13,34;UBERON:0001896,1.25e-12,2;UBERON:0002298,1.25e-12,2;UBERON:0005290,1.25e-12,2;UBERON:0010096,1.25e-12,2;UBERON:0010371,3.97e-12,73;UBERON:0003056,7.56e-11,49;UBERON:0004121,1.30e-10,95;UBERON:0000924,1.30e-10,95;UBERON:0006601,1.30e-10,95;UBERON:0004733,1.80e-09,6;UBERON:0004732,1.80e-09,6;UBERON:0002028,1.80e-09,6;UBERON:0007277,1.80e-09,6;UBERON:0010314,2.75e-09,92;UBERON:0001851,2.79e-07,1;UBERON:0005889,2.79e-07,1;UBERON:0000025,3.64e-07,114
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0.131886287730194,0,0,0,0,0.15279824777681,0,0,0,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.585561594023094,2.30391377494801,0,0,0,0,0.748953197024114,0.915001205637253,0,1.21677024134594,1.79000820131231,0.62336413367868,1.29793010454206,0,0,0,0.420883711772948,0,0,0.180062129805349,0.30140963567143,0.340182495756639,0.2562274405697,0.0937017245597288,0.776110112217047,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,0.205809224758569,0,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,1.64096361229084,0,0,0,0,0,0,0,0,0,0,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0.356737635204141,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,1.71868654031819,4.29632955859219,0,2.2661816921691,1.35004500046361,0.900642406448441,3.17199686288943,3.10656187051092,0,0,0,0.243106717068294,0,0,0.44449345560323,0,0.320919209591815,0,0,0,0.187283014939765,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.441596760403192,0,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0.131886287730194,0,0,0,0,0.15279824777681,0,0,0,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.585561594023094,2.30391377494801,0,0,0,0,0.748953197024114,0.915001205637253,0,1.21677024134594,1.79000820131231,0.62336413367868,1.29793010454206,0,0,0,0.420883711772948,0,0,0.180062129805349,0.30140963567143,0.340182495756639,0.2562274405697,0.0937017245597288,0.776110112217047,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,0.205809224758569,0,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,1.64096361229084,0,0,0,0,0,0,0,0,0,0,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0.356737635204141,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,1.71868654031819,4.29632955859219,0,2.2661816921691,1.35004500046361,0.900642406448441,3.17199686288943,3.10656187051092,0,0,0,0.243106717068294,0,0,0.44449345560323,0,0.320919209591815,0,0,0,0.187283014939765,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.441596760403192,0,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421
|short_description=p@chr10:90340066..90340070,+
|short_description=p@chr10:90340066..90340070,+
}}
}}

Latest revision as of 00:39, 5 August 2015

Short description:p@chr10:90340066..90340070, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr10:90340066..90340070, +
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0.0
1.0
2.0
3.0
4.0
5.0




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data