FFCP PHASE1:Mm9::chr10:53057532..53057564,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18821 | |EntrezGene=18821 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=10 | |MCL_coexpression_id=10 | ||
|TSSclassifier=NA | |||
|UniProt=P61014 | |UniProt=P61014 | ||
|association_with_transcript=40bp_to_ENSMUST00000046221,ENSMUST00000163319,NM_001141927,NM_023129,uc007fbo.2,uc011xdu.1_5end | |association_with_transcript=40bp_to_ENSMUST00000046221,ENSMUST00000163319,NM_001141927,NM_023129,uc007fbo.2,uc011xdu.1_5end | ||
|cluster_id=chr10:53057532..53057564,+ | |||
|description=CAGE_peak_1_at_Pln_5end | |description=CAGE_peak_1_at_Pln_5end | ||
|id=chr10:53057532..53057564,+ | |id=chr10:53057532..53057564,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!8.43e-14!18;UBERON:0000948!8.43e-14!18;UBERON:0005498!8.43e-14!18;UBERON:0004140!8.43e-14!18;UBERON:0009881!8.43e-14!18;UBERON:0004141!8.43e-14!18;UBERON:0003084!8.43e-14!18;UBERON:0007005!8.43e-14!18;UBERON:0004139!8.43e-14!18;UBERON:0004291!8.43e-14!18;UBERON:0004535!3.78e-11!23;UBERON:0001009!3.78e-11!23;UBERON:0004872!2.84e-07!33 | |ontology_enrichment_uberon=UBERON:0007100!8.43e-14!18;UBERON:0000948!8.43e-14!18;UBERON:0005498!8.43e-14!18;UBERON:0004140!8.43e-14!18;UBERON:0009881!8.43e-14!18;UBERON:0004141!8.43e-14!18;UBERON:0003084!8.43e-14!18;UBERON:0007005!8.43e-14!18;UBERON:0004139!8.43e-14!18;UBERON:0004291!8.43e-14!18;UBERON:0004535!3.78e-11!23;UBERON:0001009!3.78e-11!23;UBERON:0004872!2.84e-07!33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.14e-16,18;UBERON:0000948,5.14e-16,18;UBERON:0005498,5.14e-16,18;UBERON:0004140,5.14e-16,18;UBERON:0009881,5.14e-16,18;UBERON:0004141,5.14e-16,18;UBERON:0003084,5.14e-16,18;UBERON:0007005,5.14e-16,18;UBERON:0004139,5.14e-16,18;UBERON:0004291,5.14e-16,18;UBERON:0004535,1.64e-13,23;UBERON:0001009,1.64e-13,23;UBERON:0004872,7.70e-07,33 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607425802169478,0,0,0,0,11.2257142999412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60163210450326,21.7765414353455,134.074743992135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20231761998777,2.55374676170375,1.53606533256243,0,0,0,1.3959149950069,1.12552522006336,3.36156145108982,0,0.142371680799103,0,0,0,14.4932244350839,0,0,0,0,0,31.8808833699077,0,0,0,0.14084341977668,0,0,0,0,0,0,2.39786147410026,0.258937883647172,0.890652834388949,0.173485326766136,0,0,0,0,0.251333182659351,0,7.08536848907567,0.884610551949874,0.647067399789637,0.662524555381181,0.969750506270444,7.45567044872489,2.34224637609238,0.209446706813455,2.55457055208591,0,0,0,3.14560342750128,0.457500602818626,0,2.25971616249959,1.53429274398198,3.53239675751252,2.27137768294861,0,0.870848794270651,0.505445516867349,6.31325567659422,0,0,0.180062129805349,1.20563854268572,0.408218994907967,1.2811372028485,1.59292931751539,6.46758426847539,0,0,0,0,0,0.348252166522167,0,0.199034266818493,0,0,0,364.541359662483,512.673967118676,525.601157404702,718.993761972284,972.999125990912,938.561114806809,1415.66665564048,1362.82887911007,1711.7799191027,1437.10116929442,3026.5913677622,3935.56642821311,4075.76324944341,3886.91524111276,3858.56874577945,4.83666881697493,0,0.330418782983798,3.43785736662608,0.426576501070468,1.39342003116263,1.15980715189884,0.80673409849337,1.11189021922435,1.90225626112559,4.74529061544512,2.63518327558417,7.79139147280835,7.16243299348143,6.43381487493096,2.69645822596266,7.13255564586491,8.36393347668342,0,0,0,28.1038832426534,0,0,0.69560190836683,2.06654207171443,2.511979645462,2.09775178667061,0.296452627087149,14.8492144087324,0,0,0,0,0.25462585178142,0,0,0,0,0.744281895337007,0,0.757736633841335,0,0.482443521363367,20.3228509183265,3.03186258832776,17.6002174557388,4.2436271443797,0.704070744865506,22.6133447546451,8.09348379012447,5.26860849216057,3.4679731703362,4.65075848262427,4.78364305972461,10.651115456523,9.32498902075836,9.69148692496127,0,0,0,0.275936746304732,3.53211297973142,3.6335622843583,0,2.01976741763498,0,0,0,0,0,0,0,0,0,1.60660658210904,2.55492153374884,0.178065603667255,0,8.90838664051691,1.32745138339963,0.242780636154981,0,0.377210159511796,0,1.22974059177571,1.03371317267288,0,0.356497378384721,5.37262488490887,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0.21183207086382,1.98475558249466,0.16488625294148,0,0,0,0.164140899745061,6.41257840585672,1.48340241608408,0.512612642393558,0.206386867963223,0,0.376736914009382,0.410082683163076,0,0,0,0,39.1414953386197,0,1.42323626988794,4.75223499615926,8.57262013659322,12.2283035697859,19.4204658794142,27.7715611237129,18.3229159388821,6.99920855775682,0.621339313086926,7.32800820289447,0,0,0,0,0,0,0,0,0.241584120826006,4.89651010638371,2.21207784439725,0,0,1.94881234466693,1.43221356533985,5.56307793387542,0.480781798079875,0.590758108698309,1.00966449948148,0.228620419965,0.100826185136841,0.487289403698762,0.288635524920988,0.467507608726276,6.57518112484113,0,0,0,5.02292944483695,2.43987218086537,3.47988086107804,3.85863082342319,2.00628841614145,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0,0,0,0.453142408984205,0,8.40677515431831,5.58634822761443,7.17081144167364,5.10524105843418,6.49800804146745,10.4790799816508,17.5574914963276,11.9500333198559,13.4786068028562,14.4037410705365,13.6878821940729,13.9583492625696,14.8889996877113,11.9727034997106,9.87890066036548,6.66811167796303,10.5454736609819,10.2241886845764,10.3021475200827,12.6591071315582,16.1148548621145,12.2458306249943,11.4449371174714,14.0986024133359,13.6458601602229,11.1691282417013,10.2439664808753,10.7858581689516,11.81495790459,12.906272248128,9.25353141368558,8.86540341380071,10.2307760792422,12.3949472948773,11.1885834369062,0,15.6734177658424,23.6358159453128,0.382576664137687,0.882365676478062,0.927471342481686 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607425802169478,0,0,0,0,11.2257142999412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60163210450326,21.7765414353455,134.074743992135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20231761998777,2.55374676170375,1.53606533256243,0,0,0,1.3959149950069,1.12552522006336,3.36156145108982,0,0.142371680799103,0,0,0,14.4932244350839,0,0,0,0,0,31.8808833699077,0,0,0,0.14084341977668,0,0,0,0,0,0,2.39786147410026,0.258937883647172,0.890652834388949,0.173485326766136,0,0,0,0,0.251333182659351,0,7.08536848907567,0.884610551949874,0.647067399789637,0.662524555381181,0.969750506270444,7.45567044872489,2.34224637609238,0.209446706813455,2.55457055208591,0,0,0,3.14560342750128,0.457500602818626,0,2.25971616249959,1.53429274398198,3.53239675751252,2.27137768294861,0,0.870848794270651,0.505445516867349,6.31325567659422,0,0,0.180062129805349,1.20563854268572,0.408218994907967,1.2811372028485,1.59292931751539,6.46758426847539,0,0,0,0,0,0.348252166522167,0,0.199034266818493,0,0,0,364.541359662483,512.673967118676,525.601157404702,718.993761972284,972.999125990912,938.561114806809,1415.66665564048,1362.82887911007,1711.7799191027,1437.10116929442,3026.5913677622,3935.56642821311,4075.76324944341,3886.91524111276,3858.56874577945,4.83666881697493,0,0.330418782983798,3.43785736662608,0.426576501070468,1.39342003116263,1.15980715189884,0.80673409849337,1.11189021922435,1.90225626112559,4.74529061544512,2.63518327558417,7.79139147280835,7.16243299348143,6.43381487493096,2.69645822596266,7.13255564586491,8.36393347668342,0,0,0,28.1038832426534,0,0,0.69560190836683,2.06654207171443,2.511979645462,2.09775178667061,0.296452627087149,14.8492144087324,0,0,0,0,0.25462585178142,0,0,0,0,0.744281895337007,0,0.757736633841335,0,0.482443521363367,20.3228509183265,3.03186258832776,17.6002174557388,4.2436271443797,0.704070744865506,22.6133447546451,8.09348379012447,5.26860849216057,3.4679731703362,4.65075848262427,4.78364305972461,10.651115456523,9.32498902075836,9.69148692496127,0,0,0,0.275936746304732,3.53211297973142,3.6335622843583,0,2.01976741763498,0,0,0,0,0,0,0,0,0,1.60660658210904,2.55492153374884,0.178065603667255,0,8.90838664051691,1.32745138339963,0.242780636154981,0,0.377210159511796,0,1.22974059177571,1.03371317267288,0,0.356497378384721,5.37262488490887,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0.21183207086382,1.98475558249466,0.16488625294148,0,0,0,0.164140899745061,6.41257840585672,1.48340241608408,0.512612642393558,0.206386867963223,0,0.376736914009382,0.410082683163076,0,0,0,0,39.1414953386197,0,1.42323626988794,4.75223499615926,8.57262013659322,12.2283035697859,19.4204658794142,27.7715611237129,18.3229159388821,6.99920855775682,0.621339313086926,7.32800820289447,0,0,0,0,0,0,0,0,0.241584120826006,4.89651010638371,2.21207784439725,0,0,1.94881234466693,1.43221356533985,5.56307793387542,0.480781798079875,0.590758108698309,1.00966449948148,0.228620419965,0.100826185136841,0.487289403698762,0.288635524920988,0.467507608726276,6.57518112484113,0,0,0,5.02292944483695,2.43987218086537,3.47988086107804,3.85863082342319,2.00628841614145,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0,0,0,0.453142408984205,0,8.40677515431831,5.58634822761443,7.17081144167364,5.10524105843418,6.49800804146745,10.4790799816508,17.5574914963276,11.9500333198559,13.4786068028562,14.4037410705365,13.6878821940729,13.9583492625696,14.8889996877113,11.9727034997106,9.87890066036548,6.66811167796303,10.5454736609819,10.2241886845764,10.3021475200827,12.6591071315582,16.1148548621145,12.2458306249943,11.4449371174714,14.0986024133359,13.6458601602229,11.1691282417013,10.2439664808753,10.7858581689516,11.81495790459,12.906272248128,9.25353141368558,8.86540341380071,10.2307760792422,12.3949472948773,11.1885834369062,0,15.6734177658424,23.6358159453128,0.382576664137687,0.882365676478062,0.927471342481686 | ||
|short_description=p1@Pln | |short_description=p1@Pln | ||
}} | }} |
Latest revision as of 02:04, 26 September 2015
Short description: | p1@Pln |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pln_5end |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | 40bp_to_ENSMUST00000046221, ENSMUST00000163319, NM_001141927, NM_023129, uc007fbo.2, uc011xdu.1_5end |
EntrezGene: | Pln |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 5.14e-16 | 18 |
heart | 5.14e-16 | 18 |
primitive heart tube | 5.14e-16 | 18 |
primary heart field | 5.14e-16 | 18 |
anterior lateral plate mesoderm | 5.14e-16 | 18 |
heart tube | 5.14e-16 | 18 |
heart primordium | 5.14e-16 | 18 |
cardiac mesoderm | 5.14e-16 | 18 |
cardiogenic plate | 5.14e-16 | 18 |
heart rudiment | 5.14e-16 | 18 |
cardiovascular system | 1.64e-13 | 23 |
circulatory system | 1.64e-13 | 23 |
splanchnic layer of lateral plate mesoderm | 7.70e-07 | 33 |