FFCP PHASE1:Mm9::chr1:168060599..168060610,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=59290 | |EntrezGene=59290 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |MCL_coexpression_id=12 | ||
|TSSclassifier=NA | |||
|UniProt=Q9JKA5 | |UniProt=Q9JKA5 | ||
|association_with_transcript=1bp_to_ENSMUST00000166860_5end | |association_with_transcript=1bp_to_ENSMUST00000166860_5end | ||
|cluster_id=chr1:168060599..168060610,+ | |||
|description=CAGE_peak_3_at_Gpa33_5end | |description=CAGE_peak_3_at_Gpa33_5end | ||
|id=chr1:168060599..168060610,+ | |id=chr1:168060599..168060610,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.31e-11!9;CL:0002251!2.31e-11!9;CL:0000239!1.75e-08!6;CL:0000677!1.75e-08!6;CL:0000212!1.75e-08!6;CL:0000584!1.75e-08!6;CL:0000075!4.36e-07!7;CL:0002076!4.47e-07!15 | |ontology_enrichment_celltype=CL:0002563!2.31e-11!9;CL:0002251!2.31e-11!9;CL:0000239!1.75e-08!6;CL:0000677!1.75e-08!6;CL:0000212!1.75e-08!6;CL:0000584!1.75e-08!6;CL:0000075!4.36e-07!7;CL:0002076!4.47e-07!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.66e-18,9;CL:0002251,4.66e-18,9;CL:0000239,3.26e-13,6;CL:0000677,3.26e-13,6;CL:0000584,3.26e-13,6;CL:0000075,3.27e-11,7;CL:0000066,2.97e-10,25;CL:0002076,3.98e-10,15;CL:0000682,7.57e-08,3;CL:0000223,3.61e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!8.83e-25!59;UBERON:0000160!4.22e-23!43;UBERON:0000344!2.75e-19!15;UBERON:0001242!1.43e-16!13;UBERON:0000060!1.43e-16!13;UBERON:0001262!1.43e-16!13;UBERON:0004786!1.43e-16!13;UBERON:0001007!1.16e-11!128;UBERON:0001555!1.16e-11!128;UBERON:0007026!1.16e-11!128;UBERON:0003350!2.31e-11!9;UBERON:0004808!2.31e-11!9;UBERON:0001277!2.31e-11!9;UBERON:0004119!2.90e-11!130;UBERON:0000925!2.90e-11!130;UBERON:0006595!2.90e-11!130;UBERON:0004921!3.02e-10!126;UBERON:0004185!3.02e-10!126;UBERON:0004923!3.61e-10!24;UBERON:0000485!7.58e-09!11 | |ontology_enrichment_uberon=UBERON:0005409!8.83e-25!59;UBERON:0000160!4.22e-23!43;UBERON:0000344!2.75e-19!15;UBERON:0001242!1.43e-16!13;UBERON:0000060!1.43e-16!13;UBERON:0001262!1.43e-16!13;UBERON:0004786!1.43e-16!13;UBERON:0001007!1.16e-11!128;UBERON:0001555!1.16e-11!128;UBERON:0007026!1.16e-11!128;UBERON:0003350!2.31e-11!9;UBERON:0004808!2.31e-11!9;UBERON:0001277!2.31e-11!9;UBERON:0004119!2.90e-11!130;UBERON:0000925!2.90e-11!130;UBERON:0006595!2.90e-11!130;UBERON:0004921!3.02e-10!126;UBERON:0004185!3.02e-10!126;UBERON:0004923!3.61e-10!24;UBERON:0000485!7.58e-09!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.17e-50,31;UBERON:0005409,4.40e-46,47;UBERON:0000344,1.93e-31,15;UBERON:0001242,7.57e-27,13;UBERON:0001262,7.57e-27,13;UBERON:0004786,7.57e-27,13;UBERON:0004923,3.31e-18,24;UBERON:0003350,4.66e-18,9;UBERON:0004808,4.66e-18,9;UBERON:0001277,4.66e-18,9;UBERON:0001007,7.39e-18,116;UBERON:0001555,7.39e-18,116;UBERON:0007026,7.39e-18,116;UBERON:0004119,2.05e-17,118;UBERON:0000925,2.05e-17,118;UBERON:0006595,2.05e-17,118;UBERON:0004921,1.73e-15,114;UBERON:0000485,1.89e-14,11;UBERON:0002108,8.55e-10,4;UBERON:0000331,5.27e-08,3;UBERON:0002116,5.27e-08,3;UBERON:0001204,5.27e-08,3;UBERON:0001168,5.27e-08,3 | |||
|phase1_expression=0,55.8360652222978,56.874904923692,37.2030979907401,32.0573267165662,17.4594442788365,22.660426137766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,61.5970827754616,71.1168771308227,56.848964447387,46.091533589021,58.6081752905618,71.0687588766838,42.3410617996684,59.4237768556217,0,0,0,6.35473563452804,3.98963148860382,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38755514223978,0,0,0,0,0,0,0,0,0.253359865475099,0,5.48082622651488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,61.5092812019803,0,0,39.0849294469145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,105.073172988848,32.2629691329524,0,0.232236671860439,0.902072229254653,3.83198696784351,3.11329261382818,3.99473814836374,30.3698599388487,8.72904460037258,9.80207314321051,12.3353012665514,11.1129529657898,36.8515957548231,28.0979464837102,32.8583100869706,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,1.80899805217755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.9866202373493,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0.216010681643603,0.418176592028937,2.18362563746178,1.48350781023303,2.64491058321075,1.30877970992015,60.7894224738509,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0,0,0,2.51146472241848,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.505394423527595,0.50695859978048,0,0.280924522409647,0.448176066834085,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0.685738504770831,0.354951612318675,0.476872379894642,0,0.188218760830661,0.169229215783353,0.182927972872773,0,0.407412341537585,0,0.237270036248348,0,0.409231043169689,0.309873682371932,0,0,0.467863216890817,0.859484216193193,0.191288332068843,0.441182838239031,0 | |phase1_expression=0,55.8360652222978,56.874904923692,37.2030979907401,32.0573267165662,17.4594442788365,22.660426137766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,61.5970827754616,71.1168771308227,56.848964447387,46.091533589021,58.6081752905618,71.0687588766838,42.3410617996684,59.4237768556217,0,0,0,6.35473563452804,3.98963148860382,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38755514223978,0,0,0,0,0,0,0,0,0.253359865475099,0,5.48082622651488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,61.5092812019803,0,0,39.0849294469145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,105.073172988848,32.2629691329524,0,0.232236671860439,0.902072229254653,3.83198696784351,3.11329261382818,3.99473814836374,30.3698599388487,8.72904460037258,9.80207314321051,12.3353012665514,11.1129529657898,36.8515957548231,28.0979464837102,32.8583100869706,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,1.80899805217755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.9866202373493,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0.216010681643603,0.418176592028937,2.18362563746178,1.48350781023303,2.64491058321075,1.30877970992015,60.7894224738509,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0,0,0,2.51146472241848,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.505394423527595,0.50695859978048,0,0.280924522409647,0.448176066834085,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0.685738504770831,0.354951612318675,0.476872379894642,0,0.188218760830661,0.169229215783353,0.182927972872773,0,0.407412341537585,0,0.237270036248348,0,0.409231043169689,0.309873682371932,0,0,0.467863216890817,0.859484216193193,0.191288332068843,0.441182838239031,0 | ||
|short_description=p3@Gpa33 | |short_description=p3@Gpa33 | ||
}} | }} |
Latest revision as of 17:36, 26 September 2015
Short description: | p3@Gpa33 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gpa33_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 1bp_to_ENSMUST00000166860_5end |
EntrezGene: | Gpa33 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.66e-18 | 9 |
epithelial cell of alimentary canal | 4.66e-18 | 9 |
brush border epithelial cell | 3.26e-13 | 6 |
gut absorptive cell | 3.26e-13 | 6 |
enterocyte | 3.26e-13 | 6 |
columnar/cuboidal epithelial cell | 3.27e-11 | 7 |
epithelial cell | 2.97e-10 | 25 |
endo-epithelial cell | 3.98e-10 | 15 |
M cell of gut | 7.57e-08 | 3 |
endodermal cell | 3.61e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.17e-50 | 31 |
gastrointestinal system | 4.40e-46 | 47 |
mucosa | 1.93e-31 | 15 |
intestinal mucosa | 7.57e-27 | 13 |
wall of intestine | 7.57e-27 | 13 |
gastrointestinal system mucosa | 7.57e-27 | 13 |
organ component layer | 3.31e-18 | 24 |
epithelium of mucosa | 4.66e-18 | 9 |
gastrointestinal system epithelium | 4.66e-18 | 9 |
intestinal epithelium | 4.66e-18 | 9 |
digestive system | 7.39e-18 | 116 |
digestive tract | 7.39e-18 | 116 |
primitive gut | 7.39e-18 | 116 |
endoderm-derived structure | 2.05e-17 | 118 |
endoderm | 2.05e-17 | 118 |
presumptive endoderm | 2.05e-17 | 118 |
subdivision of digestive tract | 1.73e-15 | 114 |
simple columnar epithelium | 1.89e-14 | 11 |
small intestine | 8.55e-10 | 4 |
ileal mucosa | 5.27e-08 | 3 |
ileum | 5.27e-08 | 3 |
mucosa of small intestine | 5.27e-08 | 3 |
wall of small intestine | 5.27e-08 | 3 |