FFCP PHASE1:Mm9::chr7:104979489..104979515,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |MCL_coexpression_id=12 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:104979489..104979515,+ | |||
|description=CAGE_peak_at_chr7:104979489..104979515,+ | |description=CAGE_peak_at_chr7:104979489..104979515,+ | ||
|id=chr7:104979489..104979515,+ | |id=chr7:104979489..104979515,+ | ||
|ontology_enrichment_celltype=CL:0002563!4.57e-09!9;CL:0002251!4.57e-09!9;CL:0002076!3.52e-08!15 | |ontology_enrichment_celltype=CL:0002563!4.57e-09!9;CL:0002251!4.57e-09!9;CL:0002076!3.52e-08!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.53e-16,9;CL:0002251,5.53e-16,9;CL:0002076,1.33e-15,15;CL:0000066,1.99e-13,25;CL:0000239,2.33e-11,6;CL:0000677,2.33e-11,6;CL:0000584,2.33e-11,6;CL:0000223,5.11e-11,20;CL:0000075,1.27e-09,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.48e-19!59;UBERON:0000160!4.59e-19!43;UBERON:0000344!1.17e-14!15;UBERON:0004119!2.94e-13!130;UBERON:0000925!2.94e-13!130;UBERON:0006595!2.94e-13!130;UBERON:0001007!3.83e-13!128;UBERON:0001555!3.83e-13!128;UBERON:0007026!3.83e-13!128;UBERON:0001242!4.48e-13!13;UBERON:0000060!4.48e-13!13;UBERON:0001262!4.48e-13!13;UBERON:0004786!4.48e-13!13;UBERON:0004921!5.21e-12!126;UBERON:0004185!5.21e-12!126;UBERON:0004923!3.82e-09!24;UBERON:0003350!4.57e-09!9;UBERON:0004808!4.57e-09!9;UBERON:0001277!4.57e-09!9;UBERON:0000485!6.75e-07!11 | |ontology_enrichment_uberon=UBERON:0005409!2.48e-19!59;UBERON:0000160!4.59e-19!43;UBERON:0000344!1.17e-14!15;UBERON:0004119!2.94e-13!130;UBERON:0000925!2.94e-13!130;UBERON:0006595!2.94e-13!130;UBERON:0001007!3.83e-13!128;UBERON:0001555!3.83e-13!128;UBERON:0007026!3.83e-13!128;UBERON:0001242!4.48e-13!13;UBERON:0000060!4.48e-13!13;UBERON:0001262!4.48e-13!13;UBERON:0004786!4.48e-13!13;UBERON:0004921!5.21e-12!126;UBERON:0004185!5.21e-12!126;UBERON:0004923!3.82e-09!24;UBERON:0003350!4.57e-09!9;UBERON:0004808!4.57e-09!9;UBERON:0001277!4.57e-09!9;UBERON:0000485!6.75e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.84e-50,31;UBERON:0005409,3.86e-40,47;UBERON:0000344,9.31e-27,15;UBERON:0001242,1.06e-23,13;UBERON:0001262,1.06e-23,13;UBERON:0004786,1.06e-23,13;UBERON:0001007,1.31e-17,116;UBERON:0001555,1.31e-17,116;UBERON:0007026,1.31e-17,116;UBERON:0004119,3.76e-17,118;UBERON:0000925,3.76e-17,118;UBERON:0006595,3.76e-17,118;UBERON:0003350,5.53e-16,9;UBERON:0004808,5.53e-16,9;UBERON:0001277,5.53e-16,9;UBERON:0004921,1.03e-15,114;UBERON:0004923,2.88e-15,24;UBERON:0000485,9.61e-13,11;UBERON:0002108,4.34e-09,4;UBERON:0000331,2.34e-07,3;UBERON:0002116,2.34e-07,3;UBERON:0001204,2.34e-07,3;UBERON:0001168,2.34e-07,3 | |||
|phase1_expression=0,10.1202868215415,3.18499467572675,3.32710632437513,3.00537437967808,2.35030980676646,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,3.19984845586813,2.75291137280604,2.29692785646008,2.58457197695445,4.52489588640367,6.27077284206034,5.04060259519861,4.8780712344167,0,0,0,3.75507105676657,3.15845826181135,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,1.08245520505607,1.77351905832569,3.53867111510348,1.02765491747154,0.258937883647172,0,0,0.304465478312141,0,0,0,0,0.741584903203122,0,0,0,0,0,3.72783522436244,0,0.41889341362691,6.38642638021478,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0.252722758433675,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,6.87571473325215,0,0,1.67527699718721,2.8235693447268,3.33567065767305,3.61428689613862,6.16887780007865,3.45867804920423,4.77536896720512,4.97391180102877,5.06906626509712,5.39291645192533,5.18731319699266,4.58024928485045,0,0,0,0,1.16371492300575,0.911765658574141,2.02356918797623,3.24742325555125,2.98297582898612,2.22114895059241,0,0.166845105716094,0,0.224862112384854,0.405720242777006,0.241177159752417,0,0,0.648540907100142,0.549122826376163,0,0.744281895337007,0.312037673114561,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.49465875882444,0,0.180938774784468,0.238744688006273,0.164140899745061,4.37221254944776,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.756037385752609,0.836353184057875,0.218362563746178,0.944050424693745,1.07449492442937,3.40282724579238,4.92536898508813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.680191150845634,0,0,0,0.579568782096571,0,0,2.78678892802786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0,0,0.377252682772152,0.561849044819294,0.256100609619477,0.34461281373368,0,0.347652977834566,0,0,0.588795680537589,0,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.592302255241736,0.365855945745545,0,0.407412341537585,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.771626443924566,0.249810577937946,0,0.214871054048298,0,0,0 | |phase1_expression=0,10.1202868215415,3.18499467572675,3.32710632437513,3.00537437967808,2.35030980676646,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,3.19984845586813,2.75291137280604,2.29692785646008,2.58457197695445,4.52489588640367,6.27077284206034,5.04060259519861,4.8780712344167,0,0,0,3.75507105676657,3.15845826181135,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,1.08245520505607,1.77351905832569,3.53867111510348,1.02765491747154,0.258937883647172,0,0,0.304465478312141,0,0,0,0,0.741584903203122,0,0,0,0,0,3.72783522436244,0,0.41889341362691,6.38642638021478,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0.252722758433675,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,6.87571473325215,0,0,1.67527699718721,2.8235693447268,3.33567065767305,3.61428689613862,6.16887780007865,3.45867804920423,4.77536896720512,4.97391180102877,5.06906626509712,5.39291645192533,5.18731319699266,4.58024928485045,0,0,0,0,1.16371492300575,0.911765658574141,2.02356918797623,3.24742325555125,2.98297582898612,2.22114895059241,0,0.166845105716094,0,0.224862112384854,0.405720242777006,0.241177159752417,0,0,0.648540907100142,0.549122826376163,0,0.744281895337007,0.312037673114561,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.49465875882444,0,0.180938774784468,0.238744688006273,0.164140899745061,4.37221254944776,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.756037385752609,0.836353184057875,0.218362563746178,0.944050424693745,1.07449492442937,3.40282724579238,4.92536898508813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.680191150845634,0,0,0,0.579568782096571,0,0,2.78678892802786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0,0,0.377252682772152,0.561849044819294,0.256100609619477,0.34461281373368,0,0.347652977834566,0,0,0.588795680537589,0,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.592302255241736,0.365855945745545,0,0.407412341537585,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.771626443924566,0.249810577937946,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr7:104979489..104979515,+ | |short_description=p@chr7:104979489..104979515,+ | ||
}} | }} |
Latest revision as of 19:58, 3 August 2015
Short description: | p@chr7:104979489..104979515, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:104979489..104979515, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.53e-16 | 9 |
epithelial cell of alimentary canal | 5.53e-16 | 9 |
endo-epithelial cell | 1.33e-15 | 15 |
epithelial cell | 1.99e-13 | 25 |
brush border epithelial cell | 2.33e-11 | 6 |
gut absorptive cell | 2.33e-11 | 6 |
enterocyte | 2.33e-11 | 6 |
endodermal cell | 5.11e-11 | 20 |
columnar/cuboidal epithelial cell | 1.27e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.84e-50 | 31 |
gastrointestinal system | 3.86e-40 | 47 |
mucosa | 9.31e-27 | 15 |
intestinal mucosa | 1.06e-23 | 13 |
wall of intestine | 1.06e-23 | 13 |
gastrointestinal system mucosa | 1.06e-23 | 13 |
digestive system | 1.31e-17 | 116 |
digestive tract | 1.31e-17 | 116 |
primitive gut | 1.31e-17 | 116 |
endoderm-derived structure | 3.76e-17 | 118 |
endoderm | 3.76e-17 | 118 |
presumptive endoderm | 3.76e-17 | 118 |
epithelium of mucosa | 5.53e-16 | 9 |
gastrointestinal system epithelium | 5.53e-16 | 9 |
intestinal epithelium | 5.53e-16 | 9 |
subdivision of digestive tract | 1.03e-15 | 114 |
organ component layer | 2.88e-15 | 24 |
simple columnar epithelium | 9.61e-13 | 11 |
small intestine | 4.34e-09 | 4 |
ileal mucosa | 2.34e-07 | 3 |
ileum | 2.34e-07 | 3 |
mucosa of small intestine | 2.34e-07 | 3 |
wall of small intestine | 2.34e-07 | 3 |