FFCP PHASE1:Hg19::chr2:200322213..200322224,-: Difference between revisions
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|id=chr2:200322213..200322224,-
|short_description=p14@SATB2
|description=CAGE_peak_14_at_SATB2_5end
|association_with_transcript=110bp_to_ENST00000440919_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23314 | |EntrezGene=23314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21637 | |HGNC=21637 | ||
|TSSclassifier=strong | |||
|UniProt=F8WCV6 | |UniProt=F8WCV6 | ||
|association_with_transcript=110bp_to_ENST00000440919_5end | |||
|cluster_id=chr2:200322213..200322224,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_14_at_SATB2_5end | |||
|id=chr2:200322213..200322224,- | |||
|ontology_enrichment_celltype=CL:0002556!7.09e-08!6;CL:0002319!1.32e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.58e-16;6!CL:0000404;1.58e-16;6!CL:0002319;1.08e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.70e-21,8;CL:0000540,1.62e-16,6;CL:0000031,1.62e-16,6;CL:0000404,1.62e-16,6;CL:0002319,1.05e-09,25 | |||
|ontology_enrichment_development_v019=CL:0000031;1.58e-16;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!6.23e-23!25;UBERON:0000203!6.23e-23!25;UBERON:0002619!1.86e-21!22;UBERON:0001950!1.99e-21!20;UBERON:0001869!5.84e-21!32;UBERON:0001893!2.16e-19!34;UBERON:0002791!5.54e-18!33;UBERON:0002020!2.69e-17!34;UBERON:0003528!2.69e-17!34;UBERON:0001017!6.71e-16!82;UBERON:0002780!4.21e-15!41;UBERON:0001890!4.21e-15!41;UBERON:0006240!4.21e-15!41;UBERON:0005743!9.69e-15!86;UBERON:0003080!1.32e-14!42;UBERON:0000073!2.05e-13!94;UBERON:0001016!2.05e-13!94;UBERON:0000955!3.24e-12!69;UBERON:0006238!3.24e-12!69;UBERON:0000033!4.05e-11!123;UBERON:0000153!6.50e-11!129;UBERON:0007811!6.50e-11!129;UBERON:0001872!8.12e-11!5;UBERON:0001049!2.34e-10!57;UBERON:0005068!2.34e-10!57;UBERON:0006241!2.34e-10!57;UBERON:0007135!2.34e-10!57;UBERON:0003056!3.27e-10!61;UBERON:0000924!4.71e-10!173;UBERON:0006601!4.71e-10!173;UBERON:0004121!6.58e-10!169;UBERON:0002616!8.18e-10!59;UBERON:0000200!1.94e-08!6;UBERON:0001758!7.09e-08!6;UBERON:0003672!7.09e-08!6;UBERON:0002346!7.90e-08!90;UBERON:0003075!9.62e-08!86;UBERON:0007284!9.62e-08!86;UBERON:0003129!1.04e-07!11;UBERON:0002021!5.36e-07!5;UBERON:0002771!9.73e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001872;2.13e-09;5!UBERON:0001950;2.20e-08;20!UBERON:0002619;1.14e-07;22!UBERON:0000956;8.46e-07;25!UBERON:0000203;8.46e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001872,2.17e-09,5;UBERON:0001017,3.11e-09,81;UBERON:0001950,2.22e-08,20;UBERON:0001016,3.26e-08,89;UBERON:0002619,1.15e-07,22;UBERON:0000956,8.53e-07,25;UBERON:0000203,8.53e-07,25 | |||
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| ||
|short_description=p14@SATB2 | |||
}} | }} |
Latest revision as of 09:08, 19 September 2015
Short description: | p14@SATB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SATB2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 110bp_to_ENST00000440919_5end |
EntrezGene: | SATB2 |
HGNC: | 21637 |
UniProt: | F8WCV6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.70e-21 | 8 |
neuron | 1.62e-16 | 6 |
neuroblast | 1.62e-16 | 6 |
electrically signaling cell | 1.62e-16 | 6 |
neural cell | 1.05e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
parietal lobe | 2.17e-09 | 5 |
central nervous system | 3.11e-09 | 81 |
neocortex | 2.22e-08 | 20 |
nervous system | 3.26e-08 | 89 |
regional part of cerebral cortex | 1.15e-07 | 22 |
cerebral cortex | 8.53e-07 | 25 |
pallium | 8.53e-07 | 25 |