FFCP PHASE1:Hg19::chr2:205409884..205409907,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:205409884..205409907,+
|short_description=p@chr2:205409884..205409907,+
|description=CAGE_peak_at_chr2:205409884..205409907,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:205409884..205409907,+ | |||
|description=CAGE_peak_at_chr2:205409884..205409907,+ | |||
|id=chr2:205409884..205409907,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002563;6.82e-12;4!CL:0002253;4.77e-11;2!CL:0002178;6.50e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.98e-12,4;CL:0002253,4.79e-11,2;CL:0002178,6.52e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.23e-07;10!UBERON:0007687;1.23e-07;10 | |||
|ontology_enrichment_disease=DOID:305!2.28e-10!106;DOID:0050687!2.55e-10!143;DOID:299!1.01e-08!25;DOID:162!3.43e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:3119;1.19e-11;14!DOID:299;2.81e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.46e-11,14;DOID:299,3.23e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.54e-09!115;UBERON:0001046!3.03e-08!19;UBERON:0005409!4.03e-08!35;UBERON:0000481!6.63e-08!347;UBERON:0001007!1.26e-07!155;UBERON:0001555!1.26e-07!155;UBERON:0007026!1.26e-07!155;UBERON:0000160!1.34e-07!27;UBERON:0000059!1.34e-07!11;UBERON:0004921!2.82e-07!129;UBERON:0004185!2.82e-07!129;UBERON:0002020!2.90e-07!34;UBERON:0003528!2.90e-07!34;UBERON:0000955!4.25e-07!69;UBERON:0006238!4.25e-07!69;UBERON:0000073!6.11e-07!94;UBERON:0001016!6.11e-07!94;UBERON:0001893!8.39e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;5.68e-15;22!UBERON:0000160;4.56e-12;17!UBERON:0001242;6.82e-12;4!UBERON:0001262;6.82e-12;4!UBERON:0004786;6.82e-12;4!UBERON:0004808;6.82e-12;4!UBERON:0001277;6.82e-12;4!UBERON:0004921;1.65e-09;33!UBERON:0001155;8.57e-09;9!UBERON:0000059;3.39e-07;11!UBERON:0000485;5.85e-07;7!UBERON:0003929;5.85e-07;7!UBERON:0002114;6.50e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,5.12e-13,25;UBERON:0000160,5.09e-12,17;UBERON:0001242,6.98e-12,4;UBERON:0001262,6.98e-12,4;UBERON:0004786,6.98e-12,4;UBERON:0004808,6.98e-12,4;UBERON:0001277,6.98e-12,4;UBERON:0001155,7.55e-09,9;UBERON:0000059,3.06e-07,11;UBERON:0002114,9.34e-07,2 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.563817616383885,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0.572471974262113,0.410623275218653,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0.127986611154418,1.24930726552346,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.175669571386252,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,1.47065232138347,0,0.357198913136319,0.22452937262617,0.337834441449967,3.06633274931766,0,0.732806975721629,0,0,0,0.496971951695318,0,0.264818361626438,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0.538168907066586,0,0.211931901159562,0.300091096084402,0.309157587715317,0,0.18611685633159,0,0,0,0.276149695926898,0.323292113637624,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0,0.414644220061482,0,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0.269662616320329,0.392442930250692,0,0.738155454624648,0,0,0,0,0,0,0,8.36321382093172,0,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0.790204397959275,0.858486162094873,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0.197030760201927,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.321707842287215,1.48418066444991,0,0,0,0,0,10.1521937656963,0,0,0.459257792658427,0.728364672026868,0.262248829918848,0,0.15403067420883,0,0,0,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0.0915694648183434,0.165018999841176,0,0,0,0.193341436584244,0.308097234229289,0.307007349452259,0.137836572484531,0,0.145016693914229,0.0852266274161009,0.267096106940212,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0.143124886741991,0,0.316379424718726,0.190630193923825,0.255897791311334,0,0,0,1.43897966066652,0,0.353437207037059,0,0,0,0,0,0,0.545999645631943,0.565621727814851,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,3.84991942105343,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0.293016358543788,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0.222617410045812,0,0.211125408127993,0.398495976502139,0.552567831062295,1.0077309914171,0.715880777515084,0,0,0.988551862620595,0,0,0.295930216910801,0,0,0,0.185536196323703,0,0.520855522170466,1.31189999994294,0,0,0.508507300585533,0.236387681767936,0,0.583209226766509,0.520874984799877,0.885741385813839,0.844175070377856,0,0,0,0,0.32681539055697,0.83654246567162,0.538651809526579,0,0.922255617552241,0.269272933229316,1.95565269459615,0,0.457987967009312,0,0,0.156980256395025,0,0.225595660617181,0.392125068635479,0.335643173951685,0.37950746544837,0.317873157960757,0.421996129056054,0.326465616318295,11.873658000451,4.32777279484182,3.98104772431402,0.442287822516696,0.611030144933625,0,0,0,0.269604531922708,0,0,0,0.19566461893209,0,0.789168805698781,1.20990716048664,0.61214552326098,0.063186579628488,1.05226393590145,2.07376382794494,0,0,0,0,0,0,0.694238953340524,0,0,0.52418000472609,0.343972064943233,0,0.0730893170861856,0,0,0,0,0,0,0,1.36885967914362,0.0801588202515337,0.426905989478705,1.19885765749278,1.44090417154106,0,0.686379991447858,0,0,0,1.22313785466253,1.77824838730966,0.203996435272644,0,1.20084057741958,0.136905378891993,0,2.57859264851974,0,0.558564802544508,0,0,0.399358000997982,0,0,0.134366944973453,0,0,0.315132729228895,0.164831716762333,0.337017719270924,0.0984274815147488,0,0,0.817220436669454,0.160753148465019,0,0.83088067605837,0.2249738915515,0,0.0607495566580247,0,0.709251365692784,1.31136470337495,0.105600336519406,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,5.74647645245373,0,0,0,0,0.517131825446202,0.66116300871345,0,0,0.854299300541557,0.943225830597996,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,1.14681839138014,0.332787154610557,0.372578417648301,0.553394539744923,0,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0.400027764663154,0,0,0,0.385239660814607,0.214441591374926,1.82696004375648,0,0.463044948647668,0.244736704506468,0.179088841081487,0.617602894321944,0,0.706756583783524,0,0.168942440653073,2.04993214870357,0.690860683462397,0.303859956177382,0.414775308455192,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0.76736622782191,0,0.786329709279482,0.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| ||
|short_description=p@chr2:205409884..205409907,+ | |||
}} | }} |
Latest revision as of 05:18, 29 July 2015
Short description: | p@chr2:205409884..205409907, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:205409884..205409907, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.98e-12 | 4 |
epithelial cell of large intestine | 4.79e-11 | 2 |
epithelial cell of stomach | 6.52e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 5.12e-13 | 25 |
intestine | 5.09e-12 | 17 |
intestinal mucosa | 6.98e-12 | 4 |
wall of intestine | 6.98e-12 | 4 |
gastrointestinal system mucosa | 6.98e-12 | 4 |
gastrointestinal system epithelium | 6.98e-12 | 4 |
intestinal epithelium | 6.98e-12 | 4 |
colon | 7.55e-09 | 9 |
large intestine | 3.06e-07 | 11 |
duodenum | 9.34e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.46e-11 | 14 |
adenocarcinoma | 3.23e-08 | 25 |