FFCP PHASE1:Mm9::chr19:32560241..32560264,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17330 | |EntrezGene=17330 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1726 | |MCL_coexpression_id=1726 | ||
|TSSclassifier=NA | |||
|UniProt=Q9Z2L6,Q8C9C2 | |UniProt=Q9Z2L6,Q8C9C2 | ||
|association_with_transcript=0bp_to_ENSMUST00000025827,NM_010799,uc008hfj.1,uc008hfk.2_5end | |association_with_transcript=0bp_to_ENSMUST00000025827,NM_010799,uc008hfj.1,uc008hfk.2_5end | ||
|cluster_id=chr19:32560241..32560264,+ | |||
|description=CAGE_peak_3_at_Minpp1_5end | |description=CAGE_peak_3_at_Minpp1_5end | ||
|id=chr19:32560241..32560264,+ | |id=chr19:32560241..32560264,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.36e-09,6;CL:0000677,1.36e-09,6;CL:0000584,1.36e-09,6;CL:0000075,4.48e-08,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.06e-22,31;UBERON:0005409,1.96e-17,47;UBERON:0001007,2.64e-14,116;UBERON:0001555,2.64e-14,116;UBERON:0007026,2.64e-14,116;UBERON:0004119,7.24e-14,118;UBERON:0000925,7.24e-14,118;UBERON:0006595,7.24e-14,118;UBERON:0004921,9.22e-14,114;UBERON:0000344,3.21e-11,15;UBERON:0001242,4.43e-11,13;UBERON:0001262,4.43e-11,13;UBERON:0004786,4.43e-11,13;UBERON:0000014,1.61e-09,5;UBERON:0001003,1.61e-09,5;UBERON:0002097,1.61e-09,5;UBERON:0002199,1.61e-09,5;UBERON:0007029,1.61e-09,5;UBERON:0007376,1.61e-09,5;UBERON:0002416,1.61e-09,5;UBERON:0007383,1.61e-09,5;UBERON:0009854,1.77e-07,23;UBERON:0009856,1.77e-07,23;UBERON:0002108,5.08e-07,4 | |||
|phase1_expression=0,5.58360652222978,10.4649825059593,13.0059610861937,13.023288978605,1.6787927191189,1.16806320297763,0.258246646883153,0.84473233291,1.40438715793196,0,0,0.171200729931206,0.0874204024189974,0.333109761815663,0.809901069559304,1.39912375625629,0.157731082679119,0,0,0.17008658030214,0,0,0.95995453676044,2.75291137280604,3.44539178469012,1.29228598847722,0.861884930743556,3.80046838912748,4.03248207615889,3.54768817048488,0,0,0,0,0.332469290716985,0,0.418531630736908,0,0.523523743973798,0,0,0,0.377690453926732,0.506884656097573,0.183546752161682,0,0,0,0,0.139986421625363,0,0.167782606057736,0,0,0,0,0,0,0,0.633831403506179,0,0,0.899899717281399,0,0.7104801149461,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0.510749352340751,0.46081959976873,0,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.30559649555362,0,0,0,0.151452386666368,0,0,0,0.679971333707751,1.07940638327563,1.29955283489534,4.48026887097336,0.983110940922263,0.340860645156116,0,0,0.14084341977668,0,0,0,1.08245520505607,0.506719730950197,0,1.82694207550496,0,0,0,0.304465478312141,0.461230994512117,0,0.117588707135705,0,0.988779870937496,0.144599356919912,0,0,0,0,1.86391761218122,0.585561594023094,0.628340120440365,3.83185582812887,0.359445373517761,0,0.127070227073065,1.04853447583376,0,0.125654352112864,0.347648640384553,0.255715457330331,0.20778804455956,0.324482526135515,0,0.497627882440372,0.758168275301024,2.10441855886474,0,0,0,0.30140963567143,0.0680364991513279,0,0,0.258703370739016,0,0,0.175951124163949,0,0,4.87553033131033,4.32142486456681,0,0,0,0.568326998791185,0.414251545071004,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0.146199987425332,0,0,0,0.102904612379284,15.8601015832223,1.32225283331772,0,0,0,0.201683524623343,0.22237804384487,1.52180500890047,5.21981967698963,4.11747386810027,3.51869292320377,1.98956472041151,2.53453313254856,4.49409704327111,3.45820879799511,3.58454291857861,0,0,0,0,0,0.140271639780637,0.252946148497029,0.147610147979602,0,0.123397163921801,1.48226313543574,0.500535317148282,0,1.12431056192427,0.608580364165509,0.241177159752417,0.25462585178142,0.575392274901621,1.13494658742525,3.56929837144506,2.87536413054709,4.09355042435354,2.18426371180192,3.28352541331245,2.69096120282868,0.482443521363367,0,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0.327726629431476,0.172684981865896,0,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0.23467170806371,0.21183207086382,2.64634077665954,10.8824926941377,7.10443477461984,6.81536051688161,16.2346387844266,18.0554989719567,5.24665505933731,0.741701208042039,0.683483523191411,0,0,0.753473828018764,0.820165366326151,0.457556346413045,0.339956859987711,0.69975726161829,0.276399947608848,1.90934123603023,0,0,0.108005340821801,0.209088296014469,0.436725127492355,0.809186078308924,2.31429676030941,2.87931536182433,1.16653475962614,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0,0.2604087696879,0.314578033277133,0,0,0,0.202725215290164,0,0,0,0,0,0.295379054349154,0,0,0,0,0.192423683280659,0.116876902181569,2.0405734525369,0,0.0897138566094757,0,0.386379188064381,0.187682475451182,0.36630324853453,0.214368379079066,5.01572104035363,0,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0,0.45032120322422,0,0,0,0,0,0,0.209613162627982,0,0.44449345560323,0.824140228955577,0.320919209591815,0.252697211763798,0.760437899670719,0.565879024158229,0.561849044819294,0.448176066834085,0.516919220600519,0.952587382566147,0.115884325944855,0.192909220463705,0,0.294397840268795,0.342869252385415,0.887379030796687,0.476872379894642,0.290692833264657,0.564656282491984,0.507687647350059,0.548783918618318,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.788035859004508,0,0.464810523557898,1.35034627686799,2.49810577937946,1.16965804222704,1.07435527024149,0.956441660344217,1.32354851471709,0.231867835620421 | |phase1_expression=0,5.58360652222978,10.4649825059593,13.0059610861937,13.023288978605,1.6787927191189,1.16806320297763,0.258246646883153,0.84473233291,1.40438715793196,0,0,0.171200729931206,0.0874204024189974,0.333109761815663,0.809901069559304,1.39912375625629,0.157731082679119,0,0,0.17008658030214,0,0,0.95995453676044,2.75291137280604,3.44539178469012,1.29228598847722,0.861884930743556,3.80046838912748,4.03248207615889,3.54768817048488,0,0,0,0,0.332469290716985,0,0.418531630736908,0,0.523523743973798,0,0,0,0.377690453926732,0.506884656097573,0.183546752161682,0,0,0,0,0.139986421625363,0,0.167782606057736,0,0,0,0,0,0,0,0.633831403506179,0,0,0.899899717281399,0,0.7104801149461,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0.510749352340751,0.46081959976873,0,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.30559649555362,0,0,0,0.151452386666368,0,0,0,0.679971333707751,1.07940638327563,1.29955283489534,4.48026887097336,0.983110940922263,0.340860645156116,0,0,0.14084341977668,0,0,0,1.08245520505607,0.506719730950197,0,1.82694207550496,0,0,0,0.304465478312141,0.461230994512117,0,0.117588707135705,0,0.988779870937496,0.144599356919912,0,0,0,0,1.86391761218122,0.585561594023094,0.628340120440365,3.83185582812887,0.359445373517761,0,0.127070227073065,1.04853447583376,0,0.125654352112864,0.347648640384553,0.255715457330331,0.20778804455956,0.324482526135515,0,0.497627882440372,0.758168275301024,2.10441855886474,0,0,0,0.30140963567143,0.0680364991513279,0,0,0.258703370739016,0,0,0.175951124163949,0,0,4.87553033131033,4.32142486456681,0,0,0,0.568326998791185,0.414251545071004,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0.146199987425332,0,0,0,0.102904612379284,15.8601015832223,1.32225283331772,0,0,0,0.201683524623343,0.22237804384487,1.52180500890047,5.21981967698963,4.11747386810027,3.51869292320377,1.98956472041151,2.53453313254856,4.49409704327111,3.45820879799511,3.58454291857861,0,0,0,0,0,0.140271639780637,0.252946148497029,0.147610147979602,0,0.123397163921801,1.48226313543574,0.500535317148282,0,1.12431056192427,0.608580364165509,0.241177159752417,0.25462585178142,0.575392274901621,1.13494658742525,3.56929837144506,2.87536413054709,4.09355042435354,2.18426371180192,3.28352541331245,2.69096120282868,0.482443521363367,0,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0.327726629431476,0.172684981865896,0,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0.23467170806371,0.21183207086382,2.64634077665954,10.8824926941377,7.10443477461984,6.81536051688161,16.2346387844266,18.0554989719567,5.24665505933731,0.741701208042039,0.683483523191411,0,0,0.753473828018764,0.820165366326151,0.457556346413045,0.339956859987711,0.69975726161829,0.276399947608848,1.90934123603023,0,0,0.108005340821801,0.209088296014469,0.436725127492355,0.809186078308924,2.31429676030941,2.87931536182433,1.16653475962614,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0,0.2604087696879,0.314578033277133,0,0,0,0.202725215290164,0,0,0,0,0,0.295379054349154,0,0,0,0,0.192423683280659,0.116876902181569,2.0405734525369,0,0.0897138566094757,0,0.386379188064381,0.187682475451182,0.36630324853453,0.214368379079066,5.01572104035363,0,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0,0.45032120322422,0,0,0,0,0,0,0.209613162627982,0,0.44449345560323,0.824140228955577,0.320919209591815,0.252697211763798,0.760437899670719,0.565879024158229,0.561849044819294,0.448176066834085,0.516919220600519,0.952587382566147,0.115884325944855,0.192909220463705,0,0.294397840268795,0.342869252385415,0.887379030796687,0.476872379894642,0.290692833264657,0.564656282491984,0.507687647350059,0.548783918618318,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.788035859004508,0,0.464810523557898,1.35034627686799,2.49810577937946,1.16965804222704,1.07435527024149,0.956441660344217,1.32354851471709,0.231867835620421 | ||
|short_description=p3@Minpp1 | |short_description=p3@Minpp1 | ||
}} | }} |
Latest revision as of 15:11, 25 September 2015
Short description: | p3@Minpp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Minpp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1726 |
Association with transcript: | 0bp_to_ENSMUST00000025827, NM_010799, uc008hfj.1, uc008hfk.2_5end |
EntrezGene: | Minpp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.36e-09 | 6 |
gut absorptive cell | 1.36e-09 | 6 |
enterocyte | 1.36e-09 | 6 |
columnar/cuboidal epithelial cell | 4.48e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.06e-22 | 31 |
gastrointestinal system | 1.96e-17 | 47 |
digestive system | 2.64e-14 | 116 |
digestive tract | 2.64e-14 | 116 |
primitive gut | 2.64e-14 | 116 |
endoderm-derived structure | 7.24e-14 | 118 |
endoderm | 7.24e-14 | 118 |
presumptive endoderm | 7.24e-14 | 118 |
subdivision of digestive tract | 9.22e-14 | 114 |
mucosa | 3.21e-11 | 15 |
intestinal mucosa | 4.43e-11 | 13 |
wall of intestine | 4.43e-11 | 13 |
gastrointestinal system mucosa | 4.43e-11 | 13 |
zone of skin | 1.61e-09 | 5 |
skin epidermis | 1.61e-09 | 5 |
skin of body | 1.61e-09 | 5 |
integument | 1.61e-09 | 5 |
surface | 1.61e-09 | 5 |
outer epithelium | 1.61e-09 | 5 |
integumental system | 1.61e-09 | 5 |
enveloping layer of ectoderm | 1.61e-09 | 5 |
digestive tract diverticulum | 1.77e-07 | 23 |
sac | 1.77e-07 | 23 |
small intestine | 5.08e-07 | 4 |