FFCP PHASE1:Mm9::chr5:130322856..130322912,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100504797,67902 | |EntrezGene=100504797,67902 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1581 | |MCL_coexpression_id=1581 | ||
|TSSclassifier=NA | |||
|UniProt=F8WIM0,Q8BPG6 | |UniProt=F8WIM0,Q8BPG6 | ||
|association_with_transcript=0bp_to_ENSMUST00000060259,ENSMUST00000171300,NM_026445,uc008ztk.1,uc012eea.1_5end | |association_with_transcript=0bp_to_ENSMUST00000060259,ENSMUST00000171300,NM_026445,uc008ztk.1,uc012eea.1_5end | ||
|cluster_id=chr5:130322856..130322912,+ | |||
|description=CAGE_peak_1_at_LOC100504797_5end,CAGE_peak_1_at_Sumf2_5end | |description=CAGE_peak_1_at_LOC100504797_5end,CAGE_peak_1_at_Sumf2_5end | ||
|id=chr5:130322856..130322912,+ | |id=chr5:130322856..130322912,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.58e-13!50;CL:0000221!1.27e-12!44;CL:0000133!1.27e-12!44;CL:0002319!3.91e-12!43;CL:0000393!7.81e-08!39;CL:0000211!7.81e-08!39;CL:0000333!9.16e-08!10;CL:0000095!9.16e-08!10;CL:0000243!9.16e-08!10;CL:0000123!9.16e-08!10;CL:0000125!9.16e-08!10;CL:0000030!9.16e-08!10;CL:0000339!9.16e-08!10;CL:0002453!8.62e-07!8 | |ontology_enrichment_celltype=CL:0000055!2.58e-13!50;CL:0000221!1.27e-12!44;CL:0000133!1.27e-12!44;CL:0002319!3.91e-12!43;CL:0000393!7.81e-08!39;CL:0000211!7.81e-08!39;CL:0000333!9.16e-08!10;CL:0000095!9.16e-08!10;CL:0000243!9.16e-08!10;CL:0000123!9.16e-08!10;CL:0000125!9.16e-08!10;CL:0000030!9.16e-08!10;CL:0000339!9.16e-08!10;CL:0002453!8.62e-07!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.27e-12,44;CL:0000133,1.27e-12,44;CL:0002319,3.91e-12,43;CL:0000393,7.81e-08,39;CL:0000211,7.81e-08,39;CL:0000333,9.16e-08,10;CL:0000095,9.16e-08,10;CL:0000243,9.16e-08,10;CL:0000123,9.16e-08,10;CL:0000125,9.16e-08,10;CL:0000030,9.16e-08,10;CL:0000339,9.16e-08,10;CL:0002453,8.62e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!6.10e-11!102;UBERON:0000924!6.10e-11!102;UBERON:0006601!6.10e-11!102;UBERON:0000073!1.35e-09!75;UBERON:0001016!1.35e-09!75;UBERON:0001017!8.73e-09!73;UBERON:0005743!8.73e-09!73;UBERON:0002346!5.70e-08!71;UBERON:0003075!5.70e-08!71;UBERON:0007284!5.70e-08!71 | |ontology_enrichment_uberon=UBERON:0004121!6.10e-11!102;UBERON:0000924!6.10e-11!102;UBERON:0006601!6.10e-11!102;UBERON:0000073!1.35e-09!75;UBERON:0001016!1.35e-09!75;UBERON:0001017!8.73e-09!73;UBERON:0005743!8.73e-09!73;UBERON:0002346!5.70e-08!71;UBERON:0003075!5.70e-08!71;UBERON:0007284!5.70e-08!71 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.35e-09,75;UBERON:0001017,8.73e-09,73;UBERON:0004121,1.12e-08,95;UBERON:0000924,1.12e-08,95;UBERON:0006601,1.12e-08,95 | |||
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|phase1_expression=31.06887633833,1.74487703819681,1.81999695755814,0.30246421130683,1.00179145989269,5.03637815735669,3.50418960893289,6.45616617207881,2.39340827657833,0.234064526321993,8.04724450659873,2.55270908785077,13.0112554747716,6.11942816932982,9.32707333083856,8.09901069559304,10.4934281719222,9.62159604342625,9.87223921961319,11.0341309467488,7.48380953329414,9.33334941288322,11.7539905112521,5.11975752938901,5.50582274561208,3.44539178469012,2.58457197695445,4.09395342103189,4.3705386474966,7.56090389279792,8.20402889424627,23.4961349180064,20.2971379902908,0,10.3986583110459,9.47537478543406,8.5751129630195,2.51118978442145,2.3440060335714,3.14114246384279,0,1.36609096991689,0,16.7442767907518,16.9299475136589,13.7660064121261,48.5082633495784,49.2736853419809,50.747508211663,53.6626521445022,55.0146636987675,48.8758718840903,6.04017381807851,6.5282592781021,8.4023449785616,24.6969058594509,23.7822755149168,22.17389996793,18.4107979382234,21.6886301501533,19.6487735086916,53.1985915348537,75.5900576694468,34.6461391153339,43.5101199529469,39.7868864369816,37.1504137042822,56.4800908822685,11.509546966241,15.6606888464761,13.4607975264884,21.4238238302853,25.3998822094356,14.3314235081496,18.0189485514284,17.4651569455904,9.91042928994498,13.5348578370299,16.2822925251618,26.509143833769,22.1400097517831,21.3574481928272,20.9387249251036,24.7615548413939,19.2525792198781,19.4454866412621,19.0778052270798,17.7079473534036,25.2168223799503,32.9492002065585,9.85539261585705,14.6272059086836,3.39985666853875,25.9057531986152,9.09686984426737,11.6486990645307,10.9546647702766,11.4188316127299,18.1850203222008,14.8402621294343,26.6194063377926,19.2489716121477,2.54805239706646,14.2213340630666,11.4740251735943,10.8944742154292,15.1657333504435,7.87868770061514,8.02707439306232,16.7739617143252,33.6561533926304,26.7929620914684,26.9820131789588,26.3764620967089,18.9317818488485,21.8659868913635,6.92145909656247,17.6411215442292,8.84610551949874,16.985519244478,8.17113618303456,9.21262980956922,9.31958806090611,14.6390398505774,11.9384622883669,6.38642638021478,6.23038647430785,10.1983464268879,9.02198612218759,9.28701964309901,11.4375150704657,10.6806199295935,14.4274185759589,12.7857728665165,11.2205544062162,13.6282660976916,22.9138568663212,12.4406970610093,22.492325500597,12.8369532090749,28.3662565658694,26.6686441142829,24.6685117833328,19.2902166829715,12.246569847239,14.3487366719032,13.3056448874815,9.8307280880826,21.5567992932842,22.6927296201383,25.1610107554447,32.2217726668535,25.580346928755,21.5916343243743,25.516984914585,29.855140022774,14.7464769335779,14.411482798424,9.94572247884574,12.6346721246656,17.3549284386011,19.2666405763286,13.2577051927718,12.0026181365916,10.7986979021165,13.7195027402741,8.85302224618743,7.47298191149885,9.05079174524142,8.86504306027114,7.78260571640215,8.77199924551994,12.0752563410078,9.26024289446565,14.5100064509248,12.657267322652,0.991256348951394,5.81791246659797,27.7274725695804,25.0815605609274,15.206360436007,12.1010114774006,10.229390016864,12.3646656973163,5.69434873853414,10.3760341476127,7.79139147280835,8.75408476981064,8.77338392036041,7.19055526923377,5.40345124686736,4.38110801159608,23.7084876191352,24.5634302110917,23.6686244913469,16.9030602111611,23.2742984601151,13.6063490587218,14.6708766128277,14.7610147979602,16.1708689676616,14.1906738510071,14.2297261001831,12.6802280344231,20.8352534819995,11.4679677316275,14.4030686185837,13.9882752656402,17.3145579211365,12.3709339103849,6.80967952455149,9.88421087477093,10.0637744569148,17.1184835927512,15.9139213288426,10.8608917517258,16.6839594575378,15.9206362049911,9.79191907883005,25.7708320007859,15.8076027148765,17.4837438348444,18.7752198630802,15.7455881995307,10.9500074807566,11.5128852236101,9.45810864637146,14.6166695168191,11.9591076493115,14.2561083802692,10.7064688756855,10.4147322178688,9.04747703635634,23.9318500880232,3.44234991113325,4.69092468718045,10.7568895291821,12.4244387787735,23.7705670796179,8.58401152494868,18.6149849455591,21.8645696806118,20.4652227846159,20.3123478259669,16.2643032080148,19.5322806244294,19.4309136803949,19.8733983379692,18.9738133414331,11.2462460747632,16.3231097989509,34.3666615077803,16.4515828947112,16.1670720513085,10.619611067197,25.977528068583,23.8835610002153,19.6149282946134,20.6711325016541,13.8345816574767,8.01127708821486,11.6330793432802,11.4079161083111,6.95280867458795,8.4334886859999,10.3135543248187,11.5749465956288,28.9898361390409,38.9369638186091,34.722599675118,25.0049729435606,27.825535545923,27.15058839935,23.4438010818241,18.5390649370331,15.6755732439227,9.48272111636336,13.5206727412014,13.2400829890643,15.078231232039,14.9215430003921,14.1161173780753,6.41257840585672,10.3838169125885,8.54354403989263,21.2578474002119,17.7786746274923,8.4765805652111,10.2520670790769,10.7525741407066,6.28920190977265,8.81694149639045,8.01559848065658,8.59203556213602,19.770999598821,17.2821547057821,13.608672943547,17.772505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| ||
|short_description=p1@LOC100504797,p1@Sumf2 | |short_description=p1@LOC100504797,p1@Sumf2 | ||
}} | }} |
Latest revision as of 22:48, 1 October 2015
Short description: | p1@LOC100504797, p1@Sumf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC100504797_5end, CAGE_peak_1_at_Sumf2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1581 |
Association with transcript: | 0bp_to_ENSMUST00000060259, ENSMUST00000171300, NM_026445, uc008ztk.1, uc012eea.1_5end |
EntrezGene: | 100504797,67902 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.27e-12 | 44 |
neurectodermal cell | 1.27e-12 | 44 |
neural cell | 3.91e-12 | 43 |
electrically responsive cell | 7.81e-08 | 39 |
electrically active cell | 7.81e-08 | 39 |
migratory neural crest cell | 9.16e-08 | 10 |
neuron associated cell | 9.16e-08 | 10 |
glial cell (sensu Vertebrata) | 9.16e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 9.16e-08 | 10 |
glial cell | 9.16e-08 | 10 |
glioblast | 9.16e-08 | 10 |
glioblast (sensu Vertebrata) | 9.16e-08 | 10 |
oligodendrocyte precursor cell | 8.62e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.35e-09 | 75 |
central nervous system | 8.73e-09 | 73 |
ectoderm-derived structure | 1.12e-08 | 95 |
ectoderm | 1.12e-08 | 95 |
presumptive ectoderm | 1.12e-08 | 95 |