FFCP PHASE1:Mm9::chr17:35396291..35396304,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |MCL_coexpression_id=6 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:35396291..35396304,+ | |||
|description=CAGE_peak_at_chr17:35396291..35396304,+ | |description=CAGE_peak_at_chr17:35396291..35396304,+ | ||
|id=chr17:35396291..35396304,+ | |id=chr17:35396291..35396304,+ | ||
|ontology_enrichment_celltype=CL:0000988!2.42e-20!32;CL:0002032!2.42e-20!32;CL:0000037!2.42e-20!32;CL:0000566!2.42e-20!32;CL:0000837!2.42e-20!32;CL:0002320!1.70e-16!46;CL:0000134!1.70e-16!46;CL:0000838!1.71e-14!12;CL:0000063!6.29e-14!66;CL:0000219!2.34e-13!54;CL:0000542!2.99e-13!13;CL:0000051!2.99e-13!13;CL:0002031!3.39e-13!25;CL:0000084!1.94e-12!11;CL:0000827!1.94e-12!11;CL:0000738!3.40e-12!17;CL:0002087!3.40e-12!17;CL:0000791!5.09e-12!9;CL:0000789!5.09e-12!9;CL:0002420!5.09e-12!9;CL:0002419!5.09e-12!9;CL:0000790!5.09e-12!9;CL:0000034!1.88e-11!97;CL:0000144!1.05e-10!121;CL:0000012!1.05e-10!121;CL:0000624!3.53e-10!8;CL:0000893!1.75e-09!6;CL:0002489!1.75e-09!6;CL:0000898!1.75e-09!6;CL:0000809!1.75e-09!6;CL:0000810!1.75e-09!6;CL:0000895!1.75e-09!6;CL:0000808!1.75e-09!6;CL:0000894!1.75e-09!6;CL:0000806!1.75e-09!6;CL:0000807!1.75e-09!6;CL:0000805!1.75e-09!6;CL:0002425!1.75e-09!6;CL:0002436!1.75e-09!6;CL:0002427!1.75e-09!6;CL:0002428!1.75e-09!6;CL:0002429!1.75e-09!6;CL:0002433!1.75e-09!6;CL:0002431!1.75e-09!6;CL:0002432!1.75e-09!6;CL:0000723!4.16e-09!91;CL:0000048!4.16e-09!91;CL:0000049!6.75e-09!19;CL:0002371!3.88e-08!118 | |ontology_enrichment_celltype=CL:0000988!2.42e-20!32;CL:0002032!2.42e-20!32;CL:0000037!2.42e-20!32;CL:0000566!2.42e-20!32;CL:0000837!2.42e-20!32;CL:0002320!1.70e-16!46;CL:0000134!1.70e-16!46;CL:0000838!1.71e-14!12;CL:0000063!6.29e-14!66;CL:0000219!2.34e-13!54;CL:0000542!2.99e-13!13;CL:0000051!2.99e-13!13;CL:0002031!3.39e-13!25;CL:0000084!1.94e-12!11;CL:0000827!1.94e-12!11;CL:0000738!3.40e-12!17;CL:0002087!3.40e-12!17;CL:0000791!5.09e-12!9;CL:0000789!5.09e-12!9;CL:0002420!5.09e-12!9;CL:0002419!5.09e-12!9;CL:0000790!5.09e-12!9;CL:0000034!1.88e-11!97;CL:0000144!1.05e-10!121;CL:0000012!1.05e-10!121;CL:0000624!3.53e-10!8;CL:0000893!1.75e-09!6;CL:0002489!1.75e-09!6;CL:0000898!1.75e-09!6;CL:0000809!1.75e-09!6;CL:0000810!1.75e-09!6;CL:0000895!1.75e-09!6;CL:0000808!1.75e-09!6;CL:0000894!1.75e-09!6;CL:0000806!1.75e-09!6;CL:0000807!1.75e-09!6;CL:0000805!1.75e-09!6;CL:0002425!1.75e-09!6;CL:0002436!1.75e-09!6;CL:0002427!1.75e-09!6;CL:0002428!1.75e-09!6;CL:0002429!1.75e-09!6;CL:0002433!1.75e-09!6;CL:0002431!1.75e-09!6;CL:0002432!1.75e-09!6;CL:0000723!4.16e-09!91;CL:0000048!4.16e-09!91;CL:0000049!6.75e-09!19;CL:0002371!3.88e-08!118 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.97e-11,32;CL:0002032,4.97e-11,32;CL:0000037,4.97e-11,32;CL:0000837,4.97e-11,32;CL:0000034,3.26e-09,97;CL:0002320,4.19e-09,46;CL:0000134,4.19e-09,46;CL:0000219,1.51e-07,54;CL:0000723,3.34e-07,91;CL:0000048,3.34e-07,91;CL:0000738,5.60e-07,17;CL:0002087,5.60e-07,17 | |||
|ontology_enrichment_disease=DOID:0060100!4.50e-09!3;DOID:4045!4.50e-09!3 | |ontology_enrichment_disease=DOID:0060100!4.50e-09!3;DOID:4045!4.50e-09!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.05e-16,3;DOID:4045,2.05e-16,3;DOID:0050686,1.86e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.70e-16!46;UBERON:0002204!3.38e-07!32 | |ontology_enrichment_uberon=UBERON:0002384!1.70e-16!46;UBERON:0002204!3.38e-07!32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.19e-09,46 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0.233612640595526,2.45334314538995,0.140788722151667,1.63845168425395,0,0.0797721589953364,0.684802919724823,1.39872643870396,0,0,0,0.473193248037357,0.274228867211478,0.42438965179803,0.17008658030214,0.297872853602656,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,23.8563029520037,21.0960543021426,24.6056159667685,75.2936304679698,23.2235464885872,17.9638830621527,0,0,0,0,0,0,0,0,0,1.67782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73918693221007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,2.51611761462433,1.79970819298022,1.52484272487678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28673953557358,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,1.63171705145613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20971958992012,0.979660166265606,1.38199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0.30246421130683,0,0,0.233612640595526,2.45334314538995,0.140788722151667,1.63845168425395,0,0.0797721589953364,0.684802919724823,1.39872643870396,0,0,0,0.473193248037357,0.274228867211478,0.42438965179803,0.17008658030214,0.297872853602656,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,23.8563029520037,21.0960543021426,24.6056159667685,75.2936304679698,23.2235464885872,17.9638830621527,0,0,0,0,0,0,0,0,0,1.67782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73918693221007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,2.51611761462433,1.79970819298022,1.52484272487678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28673953557358,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,1.63171705145613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20971958992012,0.979660166265606,1.38199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:35396291..35396304,+ | |short_description=p@chr17:35396291..35396304,+ | ||
}} | }} |
Latest revision as of 19:28, 4 August 2015
Short description: | p@chr17:35396291..35396304, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:35396291..35396304, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.97e-11 | 32 |
hematopoietic oligopotent progenitor cell | 4.97e-11 | 32 |
hematopoietic stem cell | 4.97e-11 | 32 |
hematopoietic multipotent progenitor cell | 4.97e-11 | 32 |
stem cell | 3.26e-09 | 97 |
connective tissue cell | 4.19e-09 | 46 |
mesenchymal cell | 4.19e-09 | 46 |
motile cell | 1.51e-07 | 54 |
somatic stem cell | 3.34e-07 | 91 |
multi fate stem cell | 3.34e-07 | 91 |
leukocyte | 5.60e-07 | 17 |
nongranular leukocyte | 5.60e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.19e-09 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.05e-16 | 3 |
muscle cancer | 2.05e-16 | 3 |
organ system cancer | 1.86e-08 | 6 |