FFCP PHASE1:Hg19::chr2:217538489..217538501,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:217538489..217538501,-
|short_description=p30@IGFBP5
|description=CAGE_peak_30_at_IGFBP5_5end
|association_with_transcript=-333bp_to_BC073984_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3488 | |EntrezGene=3488 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5474 | |HGNC=5474 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-333bp_to_BC073984_5end | |||
|cluster_id=chr2:217538489..217538501,- | |||
|coexpression_cluster_id=C252 | |||
|description=CAGE_peak_30_at_IGFBP5_5end | |||
|id=chr2:217538489..217538501,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000499;8.44e-18;28!CL:0000327;8.95e-16;15!CL:0000153;3.27e-15;9!CL:0000447;3.27e-15;9!CL:0000197;8.17e-11;6!CL:0000098;8.17e-11;6!CL:0002167;8.17e-11;6!CL:0000138;3.36e-10;6!CL:0002575;1.81e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000499,6.39e-18,28;CL:0000327,5.96e-16,15;CL:0000153,1.71e-15,9;CL:0000447,1.71e-15,9;CL:0000197,6.19e-11,6;CL:0000098,6.19e-11,6;CL:0002167,6.19e-11,6;CL:0000058,1.72e-10,6;CL:0000138,1.72e-10,6;CL:0002575,3.75e-08,2;CL:0000151,2.07e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;3.14e-13;3!DOID:127;3.14e-13;3!DOID:0060072;5.01e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.63e-13,3;DOID:127,2.63e-13,3;DOID:0060072,4.39e-10,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.79e-11;9!UBERON:0000042;1.79e-11;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,1.75e-08,12;UBERON:0000042,1.75e-08,12 | |||
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| ||
|short_description=p30@IGFBP5 | |||
}} | }} |
Latest revision as of 06:55, 20 September 2015
Short description: | p30@IGFBP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_IGFBP5_5end |
Coexpression cluster: | C252_hepatic_Olfactory_sacrococcigeal_leiomyoma_normal_Synoviocyte_glioblastoma |
Association with transcript: | -333bp_to_BC073984_5end |
EntrezGene: | IGFBP5 |
HGNC: | 5474 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell | 6.39e-18 | 28 |
extracellular matrix secreting cell | 5.96e-16 | 15 |
GAG secreting cell | 1.71e-15 | 9 |
carbohydrate secreting cell | 1.71e-15 | 9 |
receptor cell | 6.19e-11 | 6 |
sensory epithelial cell | 6.19e-11 | 6 |
olfactory epithelial cell | 6.19e-11 | 6 |
chondroblast | 1.72e-10 | 6 |
chondrocyte | 1.72e-10 | 6 |
central nervous system pericyte | 3.75e-08 | 2 |
secretory cell | 2.07e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 1.75e-08 | 12 |
serous membrane | 1.75e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.63e-13 | 3 |
leiomyoma | 2.63e-13 | 3 |
benign neoplasm | 4.39e-10 | 4 |