FFCP PHASE1:Mm9::chr15:76521014..76521040,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=73062 | |EntrezGene=73062 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |MCL_coexpression_id=24 | ||
|TSSclassifier=NA | |||
|UniProt=Q8CFW6 | |UniProt=Q8CFW6 | ||
|association_with_transcript=55bp_to_ENSMUST00000150399_5end | |association_with_transcript=55bp_to_ENSMUST00000150399_5end | ||
|cluster_id=chr15:76521014..76521040,+ | |||
|description=CAGE_peak_3_at_Ppp1r16a_5end | |description=CAGE_peak_3_at_Ppp1r16a_5end | ||
|id=chr15:76521014..76521040,+ | |id=chr15:76521014..76521040,+ | ||
|ontology_enrichment_celltype=CL:0000239!5.88e-08!6;CL:0000677!5.88e-08!6;CL:0000212!5.88e-08!6;CL:0000584!5.88e-08!6;CL:0002563!1.05e-07!9;CL:0002251!1.05e-07!9;CL:0000066!3.14e-07!25 | |ontology_enrichment_celltype=CL:0000239!5.88e-08!6;CL:0000677!5.88e-08!6;CL:0000212!5.88e-08!6;CL:0000584!5.88e-08!6;CL:0002563!1.05e-07!9;CL:0002251!1.05e-07!9;CL:0000066!3.14e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.01e-13,6;CL:0000677,4.01e-13,6;CL:0000584,4.01e-13,6;CL:0000075,3.37e-11,7;CL:0000682,5.77e-10,3;CL:0002563,1.25e-08,9;CL:0002251,1.25e-08,9;CL:0000066,7.91e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.95e-21!43;UBERON:0005409!2.64e-15!59;UBERON:0000344!1.21e-13!15;UBERON:0001242!1.23e-11!13;UBERON:0000060!1.23e-11!13;UBERON:0001262!1.23e-11!13;UBERON:0004786!1.23e-11!13;UBERON:0001007!3.57e-08!128;UBERON:0001555!3.57e-08!128;UBERON:0007026!3.57e-08!128;UBERON:0004119!7.79e-08!130;UBERON:0000925!7.79e-08!130;UBERON:0006595!7.79e-08!130;UBERON:0003350!1.05e-07!9;UBERON:0004808!1.05e-07!9;UBERON:0001277!1.05e-07!9;UBERON:0004921!3.52e-07!126;UBERON:0004185!3.52e-07!126;UBERON:0004923!8.30e-07!24 | |ontology_enrichment_uberon=UBERON:0000160!6.95e-21!43;UBERON:0005409!2.64e-15!59;UBERON:0000344!1.21e-13!15;UBERON:0001242!1.23e-11!13;UBERON:0000060!1.23e-11!13;UBERON:0001262!1.23e-11!13;UBERON:0004786!1.23e-11!13;UBERON:0001007!3.57e-08!128;UBERON:0001555!3.57e-08!128;UBERON:0007026!3.57e-08!128;UBERON:0004119!7.79e-08!130;UBERON:0000925!7.79e-08!130;UBERON:0006595!7.79e-08!130;UBERON:0003350!1.05e-07!9;UBERON:0004808!1.05e-07!9;UBERON:0001277!1.05e-07!9;UBERON:0004921!3.52e-07!126;UBERON:0004185!3.52e-07!126;UBERON:0004923!8.30e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.51e-42,31;UBERON:0005409,9.33e-29,47;UBERON:0000344,3.21e-22,15;UBERON:0001242,1.84e-17,13;UBERON:0001262,1.84e-17,13;UBERON:0004786,1.84e-17,13;UBERON:0004923,4.54e-13,24;UBERON:0002108,1.48e-11,4;UBERON:0001007,5.82e-11,116;UBERON:0001555,5.82e-11,116;UBERON:0007026,5.82e-11,116;UBERON:0004119,1.09e-10,118;UBERON:0000925,1.09e-10,118;UBERON:0006595,1.09e-10,118;UBERON:0004921,4.97e-09,114;UBERON:0000331,8.14e-09,3;UBERON:0002116,8.14e-09,3;UBERON:0001204,8.14e-09,3;UBERON:0001168,8.14e-09,3;UBERON:0003350,1.25e-08,9;UBERON:0004808,1.25e-08,9;UBERON:0001277,1.25e-08,9;UBERON:0000485,5.45e-07,11;UBERON:0001155,9.07e-07,2;UBERON:0000059,9.07e-07,2 | |||
|phase1_expression=0,11.5161884520989,11.3749809847384,28.1291716515352,22.5403078475856,1.34303417529512,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.59992422793407,3.21172993494038,6.89078356938024,7.32295393470427,3.01659725760245,1.90023419456374,2.26827116783938,1.10865255327652,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0.135005938331691,0,0,0.441737081903227,0,0,0.919218786610021,0,0,0,0,0.0914876436024097,0.52091337055676,0,0,0.15279824777681,0,0,0,0,0,0.579728977403356,0,0,0,0.649776417447669,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0,0.505524445014783,1.94112595522402,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0.484875253135222,1.86391761218122,0,0,3.32094171771169,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0,0.210441855886474,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,8.59088835757875,12.164726066523,0,0,0,0.201683524623343,0.889512175379481,2.28270751335071,2.84717436926707,4.94096864172033,1.50801125280162,1.59165177632921,1.36474860983384,7.19055526923377,2.59365659849633,2.78797782556114,0,0,1.1270773567308,0.203651327845314,0,0,0,0.147610147979602,0.31399745568275,0,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0.482443521363367,0,0,0,0.509235257325564,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0,0,0,0.242780636154981,0.302323556964751,0.565815239267694,0,0,1.80899805217755,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37221254944776,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.436725127492355,0,0,0,1.03691978633434,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0,0.0936415074698824,0.256100609619477,0.17230640686684,0,0.115884325944855,0,0.412085900803307,0,0,0.177475806159338,0,0.436039249896986,0,0,0.182927972872773,0,0.407412341537585,0,0,0.394017929502254,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0,11.5161884520989,11.3749809847384,28.1291716515352,22.5403078475856,1.34303417529512,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.59992422793407,3.21172993494038,6.89078356938024,7.32295393470427,3.01659725760245,1.90023419456374,2.26827116783938,1.10865255327652,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0.135005938331691,0,0,0.441737081903227,0,0,0.919218786610021,0,0,0,0,0.0914876436024097,0.52091337055676,0,0,0.15279824777681,0,0,0,0,0,0.579728977403356,0,0,0,0.649776417447669,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0,0.505524445014783,1.94112595522402,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0.484875253135222,1.86391761218122,0,0,3.32094171771169,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0,0.210441855886474,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,8.59088835757875,12.164726066523,0,0,0,0.201683524623343,0.889512175379481,2.28270751335071,2.84717436926707,4.94096864172033,1.50801125280162,1.59165177632921,1.36474860983384,7.19055526923377,2.59365659849633,2.78797782556114,0,0,1.1270773567308,0.203651327845314,0,0,0,0.147610147979602,0.31399745568275,0,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0.482443521363367,0,0,0,0.509235257325564,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0,0,0,0.242780636154981,0.302323556964751,0.565815239267694,0,0,1.80899805217755,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37221254944776,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.436725127492355,0,0,0,1.03691978633434,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0,0.0936415074698824,0.256100609619477,0.17230640686684,0,0.115884325944855,0,0.412085900803307,0,0,0.177475806159338,0,0.436039249896986,0,0,0.182927972872773,0,0.407412341537585,0,0,0.394017929502254,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p3@Ppp1r16a | |short_description=p3@Ppp1r16a | ||
}} | }} |
Latest revision as of 01:02, 27 September 2015
Short description: | p3@Ppp1r16a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ppp1r16a_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 55bp_to_ENSMUST00000150399_5end |
EntrezGene: | Ppp1r16a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.01e-13 | 6 |
gut absorptive cell | 4.01e-13 | 6 |
enterocyte | 4.01e-13 | 6 |
columnar/cuboidal epithelial cell | 3.37e-11 | 7 |
M cell of gut | 5.77e-10 | 3 |
intestinal epithelial cell | 1.25e-08 | 9 |
epithelial cell of alimentary canal | 1.25e-08 | 9 |
epithelial cell | 7.91e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.51e-42 | 31 |
gastrointestinal system | 9.33e-29 | 47 |
mucosa | 3.21e-22 | 15 |
intestinal mucosa | 1.84e-17 | 13 |
wall of intestine | 1.84e-17 | 13 |
gastrointestinal system mucosa | 1.84e-17 | 13 |
organ component layer | 4.54e-13 | 24 |
small intestine | 1.48e-11 | 4 |
digestive system | 5.82e-11 | 116 |
digestive tract | 5.82e-11 | 116 |
primitive gut | 5.82e-11 | 116 |
endoderm-derived structure | 1.09e-10 | 118 |
endoderm | 1.09e-10 | 118 |
presumptive endoderm | 1.09e-10 | 118 |
subdivision of digestive tract | 4.97e-09 | 114 |
ileal mucosa | 8.14e-09 | 3 |
ileum | 8.14e-09 | 3 |
mucosa of small intestine | 8.14e-09 | 3 |
wall of small intestine | 8.14e-09 | 3 |
epithelium of mucosa | 1.25e-08 | 9 |
gastrointestinal system epithelium | 1.25e-08 | 9 |
intestinal epithelium | 1.25e-08 | 9 |
simple columnar epithelium | 5.45e-07 | 11 |
colon | 9.07e-07 | 2 |
large intestine | 9.07e-07 | 2 |