FFCP PHASE1:Mm9::chr18:74602308..74602318,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17919 | |EntrezGene=17919 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |MCL_coexpression_id=24 | ||
|TSSclassifier=NA | |||
|UniProt=D3YVV2,P21271 | |UniProt=D3YVV2,P21271 | ||
|association_with_transcript=35bp_to_NM_201600,uc008fpo.1,uc008fpp.1_5end | |association_with_transcript=35bp_to_NM_201600,uc008fpo.1,uc008fpp.1_5end | ||
|cluster_id=chr18:74602308..74602318,+ | |||
|description=CAGE_peak_8_at_Myo5b_5end | |description=CAGE_peak_8_at_Myo5b_5end | ||
|id=chr18:74602308..74602318,+ | |id=chr18:74602308..74602318,+ | ||
|ontology_enrichment_celltype=CL:0000075!5.55e-08!7;CL:0000239!1.62e-07!6;CL:0000677!1.62e-07!6;CL:0000212!1.62e-07!6;CL:0000584!1.62e-07!6;CL:0002563!1.88e-07!9;CL:0002251!1.88e-07!9 | |ontology_enrichment_celltype=CL:0000075!5.55e-08!7;CL:0000239!1.62e-07!6;CL:0000677!1.62e-07!6;CL:0000212!1.62e-07!6;CL:0000584!1.62e-07!6;CL:0002563!1.88e-07!9;CL:0002251!1.88e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.84e-16,6;CL:0000677,1.84e-16,6;CL:0000584,1.84e-16,6;CL:0002563,5.15e-14,9;CL:0002251,5.15e-14,9;CL:0000075,5.33e-14,7;CL:0000066,5.25e-09,25;CL:0000682,7.80e-09,3;CL:0002076,5.67e-08,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.81e-13!15;UBERON:0000160!1.82e-12!43;UBERON:0005409!1.20e-11!59;UBERON:0001242!2.49e-11!13;UBERON:0000060!2.49e-11!13;UBERON:0001262!2.49e-11!13;UBERON:0004786!2.49e-11!13;UBERON:0003350!1.88e-07!9;UBERON:0004808!1.88e-07!9;UBERON:0001277!1.88e-07!9;UBERON:0004923!3.05e-07!24;UBERON:0000485!5.47e-07!11;UBERON:0001008!7.08e-07!17 | |ontology_enrichment_uberon=UBERON:0000344!4.81e-13!15;UBERON:0000160!1.82e-12!43;UBERON:0005409!1.20e-11!59;UBERON:0001242!2.49e-11!13;UBERON:0000060!2.49e-11!13;UBERON:0001262!2.49e-11!13;UBERON:0004786!2.49e-11!13;UBERON:0003350!1.88e-07!9;UBERON:0004808!1.88e-07!9;UBERON:0001277!1.88e-07!9;UBERON:0004923!3.05e-07!24;UBERON:0000485!5.47e-07!11;UBERON:0001008!7.08e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.08e-30,31;UBERON:0005409,2.39e-29,47;UBERON:0000344,8.82e-28,15;UBERON:0001242,1.64e-23,13;UBERON:0001262,1.64e-23,13;UBERON:0004786,1.64e-23,13;UBERON:0004923,3.04e-16,24;UBERON:0003350,5.15e-14,9;UBERON:0004808,5.15e-14,9;UBERON:0001277,5.15e-14,9;UBERON:0001007,1.55e-11,116;UBERON:0001555,1.55e-11,116;UBERON:0007026,1.55e-11,116;UBERON:0000485,2.87e-11,11;UBERON:0004119,3.09e-11,118;UBERON:0000925,3.09e-11,118;UBERON:0006595,3.09e-11,118;UBERON:0002108,3.91e-11,4;UBERON:0004921,9.89e-10,114;UBERON:0000331,9.33e-09,3;UBERON:0002116,9.33e-09,3;UBERON:0001204,9.33e-09,3;UBERON:0001168,9.33e-09,3 | |||
|phase1_expression=0,9.77131141390211,11.3749809847384,17.845388467103,8.01433167914156,3.02182689441402,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,2.3998863419011,1.83527424853736,8.03924749761028,3.01533397311352,4.95583835177545,5.70070258369122,5.29263272495855,2.66076612786366,0,0,0,1.44425809875637,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0.539703191637817,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0.494389935468748,0.289198713839823,0,0,0,0,3.72783522436244,0,0,4.85368404896324,0,0,0,0,0,0,0.347648640384553,0,0.20778804455956,0,0.101839363850316,0.124406970610093,0.758168275301024,0.210441855886474,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0.219195732427575,0.278047249225598,1.0447564995665,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,0,0,15.5296828002385,1.58670339998127,0,0,0.38660238396628,0.403367049246685,0.444756087689741,1.14135375667535,0.949058123089023,1.64698954724011,0.251335208800269,0.596869416123452,0.974820435595601,6.29173586057955,3.6743468478698,5.17767310461355,0,0.114248512609729,1.1270773567308,0,0.387904974335251,0.49095073923223,0.822074982615345,1.91893192373483,2.98297582898612,1.48076596706161,0.296452627087149,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0.221464689648775,0.318909537314974,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.65954501176592,0.484393280087717,0.603129249281559,0.477489376012546,0.492422699235184,4.95517422270746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,2.18362563746178,1.61837215661785,1.98368293740806,1.30877970992015,2.33306951925227,0,0.56369293868419,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,1.81384306892169,0,0,0,0,0.187682475451182,0,0.857473516316263,0.501572104035363,0,0.460325236507177,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0.419226325255965,0,0.222246727801615,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.287177344778066,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0.290692833264657,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0,9.77131141390211,11.3749809847384,17.845388467103,8.01433167914156,3.02182689441402,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,2.3998863419011,1.83527424853736,8.03924749761028,3.01533397311352,4.95583835177545,5.70070258369122,5.29263272495855,2.66076612786366,0,0,0,1.44425809875637,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0.539703191637817,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0.494389935468748,0.289198713839823,0,0,0,0,3.72783522436244,0,0,4.85368404896324,0,0,0,0,0,0,0.347648640384553,0,0.20778804455956,0,0.101839363850316,0.124406970610093,0.758168275301024,0.210441855886474,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0.219195732427575,0.278047249225598,1.0447564995665,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,0,0,15.5296828002385,1.58670339998127,0,0,0.38660238396628,0.403367049246685,0.444756087689741,1.14135375667535,0.949058123089023,1.64698954724011,0.251335208800269,0.596869416123452,0.974820435595601,6.29173586057955,3.6743468478698,5.17767310461355,0,0.114248512609729,1.1270773567308,0,0.387904974335251,0.49095073923223,0.822074982615345,1.91893192373483,2.98297582898612,1.48076596706161,0.296452627087149,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0.221464689648775,0.318909537314974,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.65954501176592,0.484393280087717,0.603129249281559,0.477489376012546,0.492422699235184,4.95517422270746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,2.18362563746178,1.61837215661785,1.98368293740806,1.30877970992015,2.33306951925227,0,0.56369293868419,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,1.81384306892169,0,0,0,0,0.187682475451182,0,0.857473516316263,0.501572104035363,0,0.460325236507177,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0.419226325255965,0,0.222246727801615,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.287177344778066,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0.290692833264657,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p8@Myo5b | |short_description=p8@Myo5b | ||
}} | }} |
Latest revision as of 17:24, 1 October 2015
Short description: | p8@Myo5b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Myo5b_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 35bp_to_NM_201600, uc008fpo.1, uc008fpp.1_5end |
EntrezGene: | Myo5b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.84e-16 | 6 |
gut absorptive cell | 1.84e-16 | 6 |
enterocyte | 1.84e-16 | 6 |
intestinal epithelial cell | 5.15e-14 | 9 |
epithelial cell of alimentary canal | 5.15e-14 | 9 |
columnar/cuboidal epithelial cell | 5.33e-14 | 7 |
epithelial cell | 5.25e-09 | 25 |
M cell of gut | 7.80e-09 | 3 |
endo-epithelial cell | 5.67e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.08e-30 | 31 |
gastrointestinal system | 2.39e-29 | 47 |
mucosa | 8.82e-28 | 15 |
intestinal mucosa | 1.64e-23 | 13 |
wall of intestine | 1.64e-23 | 13 |
gastrointestinal system mucosa | 1.64e-23 | 13 |
organ component layer | 3.04e-16 | 24 |
epithelium of mucosa | 5.15e-14 | 9 |
gastrointestinal system epithelium | 5.15e-14 | 9 |
intestinal epithelium | 5.15e-14 | 9 |
digestive system | 1.55e-11 | 116 |
digestive tract | 1.55e-11 | 116 |
primitive gut | 1.55e-11 | 116 |
simple columnar epithelium | 2.87e-11 | 11 |
endoderm-derived structure | 3.09e-11 | 118 |
endoderm | 3.09e-11 | 118 |
presumptive endoderm | 3.09e-11 | 118 |
small intestine | 3.91e-11 | 4 |
subdivision of digestive tract | 9.89e-10 | 114 |
ileal mucosa | 9.33e-09 | 3 |
ileum | 9.33e-09 | 3 |
mucosa of small intestine | 9.33e-09 | 3 |
wall of small intestine | 9.33e-09 | 3 |