Personal tools

FFCP PHASE1:Mm9::chr10:80393001..80393011,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=17873
|EntrezGene=17873
|HGNC=
|HGNC=
|MCL_coexpression_id=7
|MCL_coexpression_id=7
|TSSclassifier=NA
|UniProt=P22339
|UniProt=P22339
|association_with_transcript=165bp_to_ENSMUST00000015456,NM_008655,uc007gfl.1_5end
|association_with_transcript=165bp_to_ENSMUST00000015456,NM_008655,uc007gfl.1_5end
|cluster_id=chr10:80393001..80393011,+
|description=CAGE_peak_3_at_Gadd45b_5end
|description=CAGE_peak_3_at_Gadd45b_5end
|id=chr10:80393001..80393011,+
|id=chr10:80393001..80393011,+
|ontology_enrichment_celltype=CL:0000215!4.58e-10!3;CL:0000893!5.48e-09!6;CL:0002489!5.48e-09!6;CL:0000898!5.48e-09!6;CL:0000809!5.48e-09!6;CL:0000810!5.48e-09!6;CL:0000895!5.48e-09!6;CL:0000808!5.48e-09!6;CL:0000894!5.48e-09!6;CL:0000806!5.48e-09!6;CL:0000807!5.48e-09!6;CL:0000805!5.48e-09!6;CL:0002425!5.48e-09!6;CL:0002436!5.48e-09!6;CL:0002427!5.48e-09!6;CL:0002428!5.48e-09!6;CL:0002429!5.48e-09!6;CL:0002433!5.48e-09!6;CL:0002431!5.48e-09!6;CL:0002432!5.48e-09!6;CL:0000325!2.37e-07!2;CL:0000217!2.37e-07!2;CL:0000328!2.37e-07!2;CL:0002573!2.37e-07!2;CL:0002376!2.37e-07!2;CL:0000218!2.37e-07!2;CL:0000692!2.37e-07!2;CL:0002377!2.37e-07!2;CL:0002375!2.37e-07!2;CL:0000624!9.85e-07!8
|ontology_enrichment_celltype=CL:0000215!4.58e-10!3;CL:0000893!5.48e-09!6;CL:0002489!5.48e-09!6;CL:0000898!5.48e-09!6;CL:0000809!5.48e-09!6;CL:0000810!5.48e-09!6;CL:0000895!5.48e-09!6;CL:0000808!5.48e-09!6;CL:0000894!5.48e-09!6;CL:0000806!5.48e-09!6;CL:0000807!5.48e-09!6;CL:0000805!5.48e-09!6;CL:0002425!5.48e-09!6;CL:0002436!5.48e-09!6;CL:0002427!5.48e-09!6;CL:0002428!5.48e-09!6;CL:0002429!5.48e-09!6;CL:0002433!5.48e-09!6;CL:0002431!5.48e-09!6;CL:0002432!5.48e-09!6;CL:0000325!2.37e-07!2;CL:0000217!2.37e-07!2;CL:0000328!2.37e-07!2;CL:0002573!2.37e-07!2;CL:0002376!2.37e-07!2;CL:0000218!2.37e-07!2;CL:0000692!2.37e-07!2;CL:0002377!2.37e-07!2;CL:0002375!2.37e-07!2;CL:0000624!9.85e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000893,1.98e-20,6;CL:0002489,1.98e-20,6;CL:0000898,1.98e-20,6;CL:0000809,1.98e-20,6;CL:0000810,1.98e-20,6;CL:0000895,1.98e-20,6;CL:0000808,1.98e-20,6;CL:0000894,1.98e-20,6;CL:0000806,1.98e-20,6;CL:0000807,1.98e-20,6;CL:0000805,1.98e-20,6;CL:0002425,1.98e-20,6;CL:0002436,1.98e-20,6;CL:0002427,1.98e-20,6;CL:0002428,1.98e-20,6;CL:0002429,1.98e-20,6;CL:0002433,1.98e-20,6;CL:0002431,1.98e-20,6;CL:0002432,1.98e-20,6;CL:0000624,1.23e-15,8;CL:0000791,4.91e-14,9;CL:0000789,4.91e-14,9;CL:0002420,4.91e-14,9;CL:0002419,4.91e-14,9;CL:0000790,4.91e-14,9;CL:0000084,1.07e-11,11;CL:0000827,1.07e-11,11;CL:0002293,7.15e-11,3;CL:0000838,8.07e-11,12;CL:0000542,4.49e-10,13;CL:0000051,4.49e-10,13;CL:0000738,5.82e-08,17;CL:0002087,5.82e-08,17
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.24e-12,23;UBERON:0000974,2.24e-12,23;UBERON:0004807,2.24e-12,23;UBERON:0005058,2.24e-12,23;UBERON:0003351,2.24e-12,23;UBERON:0009113,2.24e-12,23;UBERON:0003295,2.24e-12,23;UBERON:0009722,2.24e-12,23;UBERON:0005562,2.24e-12,23;UBERON:0007690,2.24e-12,23;UBERON:0006562,6.63e-12,24;UBERON:0003408,6.63e-12,24;UBERON:0001557,6.63e-12,24;UBERON:0001042,6.63e-12,24;UBERON:0008814,6.63e-12,24;UBERON:0009145,6.63e-12,24;UBERON:0000072,1.06e-10,27;UBERON:0004177,4.90e-10,29;UBERON:0005057,4.90e-10,29;UBERON:0000077,1.72e-08,35;UBERON:0007811,2.78e-08,36;UBERON:0000065,2.16e-07,41;UBERON:0001004,3.07e-07,42;UBERON:0000153,4.30e-07,43;UBERON:0002390,8.07e-07,45;UBERON:0003061,8.07e-07,45
|phase1_expression=0,0,0,0,0.500895729946347,0,0.233612640595526,0,7.03943610758334,6.08567768437183,0.34243593645101,0.398860794976682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.530083353332288,0.377857800533928,0.289864488701678,0,0.679971333707751,0,0,0,0,0,0,0,0,0,2.54805239706646,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.559805809294632,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|phase1_expression=0,0,0,0,0.500895729946347,0,0.233612640595526,0,7.03943610758334,6.08567768437183,0.34243593645101,0.398860794976682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.530083353332288,0.377857800533928,0.289864488701678,0,0.679971333707751,0,0,0,0,0,0,0,0,0,2.54805239706646,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.559805809294632,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p3@Gadd45b
|short_description=p3@Gadd45b
}}
}}

Latest revision as of 10:27, 26 September 2015

Short description:p3@Gadd45b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Gadd45b_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: 165bp_to_ENSMUST00000015456, NM_008655, uc007gfl.1_5end
EntrezGene:Gadd45b
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
1
2
3
4
5
6
7
8




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data