FFCP PHASE1:Hg19::chr2:234826016..234826024,+: Difference between revisions
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|id=chr2:234826016..234826024,+
|short_description=p1@TRPM8
|description=CAGE_peak_1_at_TRPM8_5end
|association_with_transcript=-18bp_to_ENST00000324695,NM_024080,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79054 | |EntrezGene=79054 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17961 | |HGNC=17961 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z2W7,Q3YFM7 | |UniProt=Q7Z2W7,Q3YFM7 | ||
|association_with_transcript=-18bp_to_ENST00000324695,NM_024080,uc002vvh.2,uc010fyj.2_5end | |||
|cluster_id=chr2:234826016..234826024,+ | |||
|coexpression_cluster_id=C191 | |||
|description=CAGE_peak_1_at_TRPM8_5end | |||
|id=chr2:234826016..234826024,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.29e-36;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,6.06e-10,8 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.93e-07;3!UBERON:0003353;1.93e-07;3 | |||
|ontology_enrichment_disease=DOID:171!8.72e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:171;8.12e-17;10!DOID:3193;1.98e-10;2!DOID:1909;1.98e-10;2!DOID:962;1.98e-10;2!DOID:3095;5.52e-08;22!DOID:2994;5.52e-08;22!DOID:1192;2.25e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:171,8.12e-17,10;DOID:3193,1.89e-10,2;DOID:962,1.89e-10,2;DOID:1909,2.07e-10,2;DOID:3095,5.52e-08,22;DOID:2994,5.52e-08,22;DOID:1192,2.19e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.09e-11!82;UBERON:0000073!4.68e-11!94;UBERON:0001016!4.68e-11!94;UBERON:0005743!5.47e-11!86;UBERON:0001894!6.69e-11!7;UBERON:0006222!6.69e-11!7;UBERON:0000924!1.57e-10!173;UBERON:0006601!1.57e-10!173;UBERON:0000955!6.42e-08!69;UBERON:0006238!6.42e-08!69;UBERON:0004121!7.90e-08!169;UBERON:0001049!2.81e-07!57;UBERON:0005068!2.81e-07!57;UBERON:0006241!2.81e-07!57;UBERON:0007135!2.81e-07!57;UBERON:0002780!3.34e-07!41;UBERON:0001890!3.34e-07!41;UBERON:0006240!3.34e-07!41;UBERON:0003080!5.31e-07!42;UBERON:0005383!5.96e-07!3;UBERON:0005382!5.96e-07!3;UBERON:0002346!8.60e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;7.75e-19;4!UBERON:0000923;7.75e-19;4!UBERON:0010316;7.75e-19;4!UBERON:0005291;7.75e-19;4!UBERON:0002050;2.80e-15;5!UBERON:0005423;2.80e-15;5!UBERON:0003714;1.98e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,1.89e-10,2 | |||
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|short_description=p1@TRPM8 | |||
}} | }} |
Latest revision as of 23:56, 15 September 2015
Short description: | p1@TRPM8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRPM8_5end |
Coexpression cluster: | C191_leiomyoblastoma_Mast_parietal_acute_bone_neuroepithelioma_embryonic |
Association with transcript: | -18bp_to_ENST00000324695, NM_024080, uc002vvh.2, uc010fyj.2_5end |
EntrezGene: | TRPM8 |
HGNC: | 17961 |
UniProt: | Q7Z2W7Q3YFM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 6.06e-10 | 8 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 1.89e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 8.12e-17 | 10 |
peripheral nerve sheath neoplasm | 1.89e-10 | 2 |
neurofibroma | 1.89e-10 | 2 |
melanoma | 2.07e-10 | 2 |
germ cell and embryonal cancer | 5.52e-08 | 22 |
germ cell cancer | 5.52e-08 | 22 |
peripheral nervous system neoplasm | 2.19e-07 | 3 |