FFCP PHASE1:Hg19::chr2:235903480..235903488,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:235903480..235903488,+
|short_description=p21@SH3BP4
|description=CAGE_peak_21_at_SH3BP4_5end
|association_with_transcript=0bp_to_ENST00000454947_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23677 | |EntrezGene=23677 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10826 | |HGNC=10826 | ||
|TSSclassifier=strong | |||
|UniProt=C9JRG1 | |UniProt=C9JRG1 | ||
|association_with_transcript=0bp_to_ENST00000454947_5end | |||
|cluster_id=chr2:235903480..235903488,+ | |||
|coexpression_cluster_id=C70 | |||
|description=CAGE_peak_21_at_SH3BP4_5end | |||
|id=chr2:235903480..235903488,+ | |||
|ontology_enrichment_celltype=CL:0000064!4.56e-13!3;CL:0005012!4.56e-13!3;CL:0000067!4.56e-13!3;CL:0002304!4.56e-13!3;CL:0000319!1.19e-10!1;CL:0000075!2.50e-08!27 | |||
|ontology_enrichment_celltype_v019=CL:0002178;9.45e-18;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,8.00e-18,3 | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.46e-50;1!UBERON:0006298;3.99e-50;1 | |||
|ontology_enrichment_disease=DOID:3030!1.19e-10!1;DOID:0050619!2.08e-10!1;DOID:1357!2.08e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:3493;7.14e-26;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,5.56e-26,2 | |||
|ontology_enrichment_uberon=UBERON:0001829!5.87e-20!2;UBERON:0001044!8.74e-15!6;UBERON:0003293!8.74e-15!6;UBERON:0003294!8.74e-15!6;UBERON:0010047!8.74e-15!6;UBERON:0000167!8.74e-15!6;UBERON:0001778!4.56e-13!3;UBERON:0001775!4.56e-13!3;UBERON:0000153!3.45e-11!129;UBERON:0007811!3.45e-11!129;UBERON:0001831!6.73e-11!1;UBERON:0001567!6.73e-11!1;UBERON:0008801!6.73e-11!1;UBERON:0001736!8.14e-11!1;UBERON:0006298!8.14e-11!1;UBERON:0001764!2.08e-10!1;UBERON:0001825!2.08e-10!1;UBERON:0002902!3.29e-10!1;UBERON:0009899!3.29e-10!1;UBERON:0002336!3.96e-10!1;UBERON:0001018!3.96e-10!1;UBERON:0002473!3.96e-10!1;UBERON:0005340!3.96e-10!1;UBERON:0002316!3.96e-10!1;UBERON:0003544!3.96e-10!1;UBERON:0001020!3.96e-10!1;UBERON:0005970!3.96e-10!1;UBERON:0002437!3.96e-10!1;UBERON:0001882!4.33e-10!1;UBERON:0005403!4.33e-10!1;UBERON:0000033!4.58e-10!123;UBERON:0000488!4.98e-10!4;UBERON:0007023!2.44e-09!115;UBERON:0003408!4.45e-09!10;UBERON:0003075!9.10e-09!86;UBERON:0007284!9.10e-09!86;UBERON:0002346!2.57e-08!90;UBERON:0003056!3.17e-08!61;UBERON:0007625!4.62e-08!11;UBERON:0000970!1.52e-07!20;UBERON:0001456!3.01e-07!21;UBERON:0002104!3.44e-07!21;UBERON:0002203!5.75e-07!6;UBERON:0001768!5.75e-07!6;UBERON:0004121!9.89e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;9.38e-99;2!UBERON:0001044;3.31e-74;6!UBERON:0003293;3.31e-74;6!UBERON:0003294;3.31e-74;6!UBERON:0010047;3.31e-74;6!UBERON:0003408;3.31e-74;6!UBERON:0000167;3.31e-74;6!UBERON:0001041;9.12e-57;14!UBERON:0001831;1.46e-50;1!UBERON:0001567;1.46e-50;1!UBERON:0001736;3.99e-50;1!UBERON:0004089;4.32e-26;2!UBERON:0000161;2.96e-24;19!UBERON:0000166;2.96e-24;19!UBERON:0004921;2.04e-21;33!UBERON:0000165;8.49e-17;28!UBERON:0002365;6.15e-15;31!UBERON:0002330;6.15e-15;31!UBERON:0000945;3.26e-11;5!UBERON:0010039;3.26e-11;5!UBERON:0001555;1.93e-09;54!UBERON:0007811;1.93e-08;52!UBERON:0000153;8.05e-08;54!UBERON:0000033;9.19e-08;50!UBERON:0001444;3.80e-07;48!UBERON:0002530;7.50e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,9.38e-99,2;UBERON:0001044,4.26e-74,6;UBERON:0003293,4.26e-74,6;UBERON:0003294,4.26e-74,6;UBERON:0010047,4.26e-74,6;UBERON:0000167,4.26e-74,6;UBERON:0001831,1.46e-50,1;UBERON:0001567,1.46e-50,1;UBERON:0008801,1.46e-50,1;UBERON:0001736,3.99e-50,1;UBERON:0006298,3.99e-50,1;UBERON:0003408,5.64e-45,10;UBERON:0004089,4.32e-26,2;UBERON:0000166,4.58e-21,22;UBERON:0000165,3.13e-16,29;UBERON:0000930,3.13e-16,29;UBERON:0002365,3.01e-15,31;UBERON:0002330,3.01e-15,31;UBERON:0000161,2.90e-13,36;UBERON:0001444,5.47e-10,49;UBERON:0001041,5.98e-10,87;UBERON:0000033,7.55e-09,56;UBERON:0002530,1.93e-08,59;UBERON:0002553,3.42e-08,61;UBERON:0000153,4.50e-08,62;UBERON:0007811,4.50e-08,62;UBERON:0000945,1.59e-07,8;UBERON:0010039,1.59e-07,8;UBERON:0004921,1.75e-07,118;UBERON:0001004,6.78e-07,74 | |||
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|short_description=p21@SH3BP4 | |||
}} | }} |
Latest revision as of 01:33, 16 September 2015
Short description: | p21@SH3BP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_SH3BP4_5end |
Coexpression cluster: | C70_parotid_submaxillary_salivary_throat_trachea_aorta_tongue |
Association with transcript: | 0bp_to_ENST00000454947_5end |
EntrezGene: | SH3BP4 |
HGNC: | 10826 |
UniProt: | C9JRG1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 8.00e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 9.38e-99 | 2 |
saliva-secreting gland | 4.26e-74 | 6 |
gland of oral region | 4.26e-74 | 6 |
gland of foregut | 4.26e-74 | 6 |
oral gland | 4.26e-74 | 6 |
oral cavity | 4.26e-74 | 6 |
parotid gland | 1.46e-50 | 1 |
cheek | 1.46e-50 | 1 |
parotid gland primordium | 1.46e-50 | 1 |
submandibular gland | 3.99e-50 | 1 |
submandibular gland primordium | 3.99e-50 | 1 |
gland of gut | 5.64e-45 | 10 |
midface | 4.32e-26 | 2 |
oral opening | 4.58e-21 | 22 |
mouth | 3.13e-16 | 29 |
stomodeum | 3.13e-16 | 29 |
exocrine gland | 3.01e-15 | 31 |
exocrine system | 3.01e-15 | 31 |
orifice | 2.90e-13 | 36 |
subdivision of head | 5.47e-10 | 49 |
foregut | 5.98e-10 | 87 |
head | 7.55e-09 | 56 |
gland | 1.93e-08 | 59 |
anatomical cavity | 3.42e-08 | 61 |
anterior region of body | 4.50e-08 | 62 |
craniocervical region | 4.50e-08 | 62 |
stomach | 1.59e-07 | 8 |
food storage organ | 1.59e-07 | 8 |
subdivision of digestive tract | 1.75e-07 | 118 |
respiratory system | 6.78e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.56e-26 | 2 |