FFCP PHASE1:Mm9::chr1:72898569..72898578,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=336 | |MCL_coexpression_id=336 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:72898569..72898578,+ | |||
|description=CAGE_peak_at_chr1:72898569..72898578,+ | |description=CAGE_peak_at_chr1:72898569..72898578,+ | ||
|id=chr1:72898569..72898578,+ | |id=chr1:72898569..72898578,+ | ||
|ontology_enrichment_celltype=CL:0002453!2.75e-20!8;CL:0000333!6.45e-16!10;CL:0000095!6.45e-16!10;CL:0000243!6.45e-16!10;CL:0000123!6.45e-16!10;CL:0000125!6.45e-16!10;CL:0000030!6.45e-16!10;CL:0000339!6.45e-16!10;CL:0000128!7.36e-16!6;CL:0000126!7.36e-16!6;CL:0000127!7.36e-16!6;CL:0002319!4.57e-14!43;CL:0000221!1.19e-13!44;CL:0000133!1.19e-13!44;CL:0000055!1.68e-11!50;CL:0002321!4.15e-08!70;CL:0000220!4.15e-08!70 | |ontology_enrichment_celltype=CL:0002453!2.75e-20!8;CL:0000333!6.45e-16!10;CL:0000095!6.45e-16!10;CL:0000243!6.45e-16!10;CL:0000123!6.45e-16!10;CL:0000125!6.45e-16!10;CL:0000030!6.45e-16!10;CL:0000339!6.45e-16!10;CL:0000128!7.36e-16!6;CL:0000126!7.36e-16!6;CL:0000127!7.36e-16!6;CL:0002319!4.57e-14!43;CL:0000221!1.19e-13!44;CL:0000133!1.19e-13!44;CL:0000055!1.68e-11!50;CL:0002321!4.15e-08!70;CL:0000220!4.15e-08!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.60e-39,8;CL:0000128,5.82e-37,6;CL:0000126,5.82e-37,6;CL:0000127,5.82e-37,6;CL:0000333,1.21e-31,10;CL:0000095,1.21e-31,10;CL:0000243,1.21e-31,10;CL:0000123,1.21e-31,10;CL:0000125,1.21e-31,10;CL:0000030,1.21e-31,10;CL:0000339,1.21e-31,10;CL:0002605,3.79e-19,2;CL:0002604,3.79e-19,2;CL:0002603,1.30e-18,2;CL:0000219,1.04e-07,54;CL:0002319,2.69e-07,43;CL:0000221,3.98e-07,44;CL:0000133,3.98e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.74e-07!73;UBERON:0005743!1.74e-07!73;UBERON:0000073!3.57e-07!75;UBERON:0001016!3.57e-07!75 | |ontology_enrichment_uberon=UBERON:0001017!1.74e-07!73;UBERON:0005743!1.74e-07!73;UBERON:0000073!3.57e-07!75;UBERON:0001016!3.57e-07!75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.47e-10,4;UBERON:0002680,8.47e-10,4;UBERON:0001895,8.47e-10,4;UBERON:0010092,8.47e-10,4;UBERON:0006215,8.47e-10,4;UBERON:0004733,7.99e-07,6;UBERON:0004732,7.99e-07,6;UBERON:0002028,7.99e-07,6;UBERON:0007277,7.99e-07,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69434806608824,1.74420125104357,5.05278220289285,9.13820525649132,0.839918529752175,1.43752564364972,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,1.53687322128622,0.103689612308478,0.135005938331691,0.210324961351382,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0,0,0,0,0,0.558365998002762,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,1.29955283489534,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229902104433473,0,0,0,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486405680325106,0.274561413188081,5.75072826109418,1.11642284300551,2.18426371180192,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69434806608824,1.74420125104357,5.05278220289285,9.13820525649132,0.839918529752175,1.43752564364972,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,1.53687322128622,0.103689612308478,0.135005938331691,0.210324961351382,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0,0,0,0,0,0.558365998002762,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,1.29955283489534,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229902104433473,0,0,0,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486405680325106,0.274561413188081,5.75072826109418,1.11642284300551,2.18426371180192,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:72898569..72898578,+ | |short_description=p@chr1:72898569..72898578,+ | ||
}} | }} |
Latest revision as of 23:19, 5 August 2015
Short description: | p@chr1:72898569..72898578, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:72898569..72898578, + |
Coexpression cluster: | MCL_coexpression_mm9:336 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.60e-39 | 8 |
oligodendrocyte | 5.82e-37 | 6 |
macroglial cell | 5.82e-37 | 6 |
astrocyte | 5.82e-37 | 6 |
migratory neural crest cell | 1.21e-31 | 10 |
neuron associated cell | 1.21e-31 | 10 |
glial cell (sensu Vertebrata) | 1.21e-31 | 10 |
neuron associated cell (sensu Vertebrata) | 1.21e-31 | 10 |
glial cell | 1.21e-31 | 10 |
glioblast | 1.21e-31 | 10 |
glioblast (sensu Vertebrata) | 1.21e-31 | 10 |
astrocyte of the cerebral cortex | 3.79e-19 | 2 |
astrocyte of the hippocampus | 3.79e-19 | 2 |
astrocyte of the cerebellum | 1.30e-18 | 2 |
motile cell | 1.04e-07 | 54 |
neural cell | 2.69e-07 | 43 |
ectodermal cell | 3.98e-07 | 44 |
neurectodermal cell | 3.98e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.47e-10 | 4 |
regional part of metencephalon | 8.47e-10 | 4 |
metencephalon | 8.47e-10 | 4 |
future metencephalon | 8.47e-10 | 4 |
rhombic lip | 8.47e-10 | 4 |
segmental subdivision of hindbrain | 7.99e-07 | 6 |
segmental subdivision of nervous system | 7.99e-07 | 6 |
hindbrain | 7.99e-07 | 6 |
presumptive hindbrain | 7.99e-07 | 6 |