FFCP PHASE1:Mm9::chr4:44079916..44079933,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=50798 | |EntrezGene=50798 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |MCL_coexpression_id=8 | ||
|TSSclassifier=NA | |||
|UniProt=G3UZ98 | |UniProt=G3UZ98 | ||
|association_with_transcript=0bp_to_ENSMUST00000173274_5end | |association_with_transcript=0bp_to_ENSMUST00000173274_5end | ||
|cluster_id=chr4:44079916..44079933,- | |||
|description=CAGE_peak_3_at_Gne_5end | |description=CAGE_peak_3_at_Gne_5end | ||
|id=chr4:44079916..44079933,- | |id=chr4:44079916..44079933,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!1.61e-16!25;UBERON:0002330!1.61e-16!25;UBERON:0002107!2.91e-16!22;UBERON:0007499!2.91e-16!22;UBERON:0006925!2.91e-16!22;UBERON:0009497!2.91e-16!22;UBERON:0000015!2.91e-16!22;UBERON:0002423!2.91e-16!22;UBERON:0006235!2.91e-16!22;UBERON:0008835!2.91e-16!22;UBERON:0003894!2.91e-16!22;UBERON:0004161!2.91e-16!22;UBERON:0008836!2.91e-16!22;UBERON:0009854!4.96e-15!23;UBERON:0009856!4.96e-15!23;UBERON:0000160!1.36e-09!43;UBERON:0001007!1.74e-09!128;UBERON:0001555!1.74e-09!128;UBERON:0007026!1.74e-09!128;UBERON:0004119!2.76e-09!130;UBERON:0000925!2.76e-09!130;UBERON:0006595!2.76e-09!130;UBERON:0004921!4.80e-09!126;UBERON:0004185!4.80e-09!126;UBERON:0005172!2.54e-08!49;UBERON:0005173!2.54e-08!49;UBERON:0002417!2.54e-08!49;UBERON:0000916!2.54e-08!49;UBERON:0005409!1.00e-07!59;UBERON:0000949!3.68e-07!72 | |ontology_enrichment_uberon=UBERON:0002365!1.61e-16!25;UBERON:0002330!1.61e-16!25;UBERON:0002107!2.91e-16!22;UBERON:0007499!2.91e-16!22;UBERON:0006925!2.91e-16!22;UBERON:0009497!2.91e-16!22;UBERON:0000015!2.91e-16!22;UBERON:0002423!2.91e-16!22;UBERON:0006235!2.91e-16!22;UBERON:0008835!2.91e-16!22;UBERON:0003894!2.91e-16!22;UBERON:0004161!2.91e-16!22;UBERON:0008836!2.91e-16!22;UBERON:0009854!4.96e-15!23;UBERON:0009856!4.96e-15!23;UBERON:0000160!1.36e-09!43;UBERON:0001007!1.74e-09!128;UBERON:0001555!1.74e-09!128;UBERON:0007026!1.74e-09!128;UBERON:0004119!2.76e-09!130;UBERON:0000925!2.76e-09!130;UBERON:0006595!2.76e-09!130;UBERON:0004921!4.80e-09!126;UBERON:0004185!4.80e-09!126;UBERON:0005172!2.54e-08!49;UBERON:0005173!2.54e-08!49;UBERON:0002417!2.54e-08!49;UBERON:0000916!2.54e-08!49;UBERON:0005409!1.00e-07!59;UBERON:0000949!3.68e-07!72 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.34e-21,22;UBERON:0007499,8.34e-21,22;UBERON:0006925,8.34e-21,22;UBERON:0009497,8.34e-21,22;UBERON:0000015,8.34e-21,22;UBERON:0002423,8.34e-21,22;UBERON:0006235,8.34e-21,22;UBERON:0008835,8.34e-21,22;UBERON:0003894,8.34e-21,22;UBERON:0004161,8.34e-21,22;UBERON:0008836,8.34e-21,22;UBERON:0002365,4.84e-20,25;UBERON:0002330,4.84e-20,25;UBERON:0009854,1.68e-19,23;UBERON:0009856,1.68e-19,23;UBERON:0005256,8.34e-09,45;UBERON:0005172,4.80e-08,49;UBERON:0005173,4.80e-08,49;UBERON:0002417,4.80e-08,49;UBERON:0000916,4.80e-08,49;UBERON:0001007,1.09e-07,116;UBERON:0001555,1.09e-07,116;UBERON:0007026,1.09e-07,116;UBERON:0000160,1.23e-07,31;UBERON:0004119,2.57e-07,118;UBERON:0000925,2.57e-07,118;UBERON:0006595,2.57e-07,118;UBERON:0004921,3.15e-07,114;UBERON:0003929,5.28e-07,55 | |||
|phase1_expression=0,1.39590163055744,0.454999239389536,1.51232105653415,0,0.839396359559449,1.16806320297763,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.850432901510698,0,0,1.43993180514066,1.14704640533585,0,0.430761996159075,0.646413698057667,2.85035129184561,1.76421090831952,1.55211357458713,0,0,0,5.19932915552294,2.32728503501889,4.49172583777212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,1.15945795480671,40.4399222181252,16.319312008986,96.0671681115314,114.36064947079,208.780529387358,35.9537715537285,0,0,0,0,0,0,0,0,0,0,109.616524530298,0,1.63286352971307,0.520455980298408,0.913396434936424,2.7673859670727,1.3565037649736,3.64524992120685,0.251333182659351,1.97755974187499,2.31358971071859,0,0,0,0.484875253135222,0,0,0,7.15279754584056,0.11981512450592,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,18.0979996062368,0,0,0,0.452114453507145,0,0,0,1.29351685369508,0,0,0,0,0,0,0.205782136407943,0,0,0.257347907114715,0.284163499395593,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0.939444931322602,0,0.102904612379284,1.98251269790279,4.7601101999438,0,0.232236671860439,0.257734922644187,1.00841762311671,1.55664630691409,1.71203063501303,2.84717436926707,1.4822905925161,2.76468729680296,2.38747766449381,1.75467678407208,1.79763881730844,3.02593269824572,3.78368419183298,0.189667900953082,0,0,0,0,0.49095073923223,0.189709611372772,0.442830443938806,0,1.72756029490521,184.393534048207,2.16898637430922,2.75182593158484,4.27238013531222,10.7515864335907,18.5706413009361,20.3700681425136,45.4559897172281,174.619639236713,32.1236853430055,38.8174157623857,59.5425516269605,43.997311909153,96.2325524978496,65.6594533490199,152.934596272187,2.40179147216586,0,0,0,0.234690248288502,0.167506257441816,0.714130922658041,0.975668239288994,0.157635144106191,0,0,0.327726629431476,0.172684981865896,1.15719246865209,0,0,0.491764273019036,2.20749397043786,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,1.24645922567079,0.325773918707152,0.329940245945071,11.9470624505967,0,0.302323556964751,0.377210159511796,0.590603785761546,0.614870295887855,1.03371317267288,0.727067458955011,0.712994756769443,3.79244109522979,3.16255825724996,4.12542172992747,3.06395645178409,0,0.129358683782755,0,0,1.42695054081656,0.987294123612726,2.13125464380219,0,0.21183207086382,0,0.16488625294148,1.29171541356724,0,0,0,2.04036585640896,0,0,0,0.555583582109135,0,0,0,0.169978429993855,0.279902904647316,0,0.954670618015114,0,0.203319467126849,0.648032044930808,0,1.52853794622324,1.07891477107857,5.04186079924549,0,2.20345454596048,1.24267862617385,0,0,0,0,0,0,0,0.911430693907651,0,0,0,0,0,0,0,0,0,0.360586348559907,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0.798049746802062,0.341467211508268,2.91728060481953,3.98265008993166,4.22840069435032,4.22268782823069,5.56294654545014,7.06022261101994,4.54854981174835,3.8021894983536,4.14977951049368,3.7456602987953,4.09760975391163,3.84817642002609,3.33405583898152,4.05595140806994,2.70072908649187,4.53294490883637,5.15196220470391,2.74295401908332,3.54951612318675,4.5302876089991,4.65108533223451,4.04670335785922,4.82303264982556,3.84148743032822,2.10455769150274,3.66671107383827,3.92799590160417,2.72860541685601,3.34915240076916,5.32000356120596,4.02835787083512,5.78719832943424,0,7.95367468714389,12.4625211348013,1.14772999241306,0.882365676478062,0 | |phase1_expression=0,1.39590163055744,0.454999239389536,1.51232105653415,0,0.839396359559449,1.16806320297763,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.850432901510698,0,0,1.43993180514066,1.14704640533585,0,0.430761996159075,0.646413698057667,2.85035129184561,1.76421090831952,1.55211357458713,0,0,0,5.19932915552294,2.32728503501889,4.49172583777212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,1.15945795480671,40.4399222181252,16.319312008986,96.0671681115314,114.36064947079,208.780529387358,35.9537715537285,0,0,0,0,0,0,0,0,0,0,109.616524530298,0,1.63286352971307,0.520455980298408,0.913396434936424,2.7673859670727,1.3565037649736,3.64524992120685,0.251333182659351,1.97755974187499,2.31358971071859,0,0,0,0.484875253135222,0,0,0,7.15279754584056,0.11981512450592,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,18.0979996062368,0,0,0,0.452114453507145,0,0,0,1.29351685369508,0,0,0,0,0,0,0.205782136407943,0,0,0.257347907114715,0.284163499395593,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0.939444931322602,0,0.102904612379284,1.98251269790279,4.7601101999438,0,0.232236671860439,0.257734922644187,1.00841762311671,1.55664630691409,1.71203063501303,2.84717436926707,1.4822905925161,2.76468729680296,2.38747766449381,1.75467678407208,1.79763881730844,3.02593269824572,3.78368419183298,0.189667900953082,0,0,0,0,0.49095073923223,0.189709611372772,0.442830443938806,0,1.72756029490521,184.393534048207,2.16898637430922,2.75182593158484,4.27238013531222,10.7515864335907,18.5706413009361,20.3700681425136,45.4559897172281,174.619639236713,32.1236853430055,38.8174157623857,59.5425516269605,43.997311909153,96.2325524978496,65.6594533490199,152.934596272187,2.40179147216586,0,0,0,0.234690248288502,0.167506257441816,0.714130922658041,0.975668239288994,0.157635144106191,0,0,0.327726629431476,0.172684981865896,1.15719246865209,0,0,0.491764273019036,2.20749397043786,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,1.24645922567079,0.325773918707152,0.329940245945071,11.9470624505967,0,0.302323556964751,0.377210159511796,0.590603785761546,0.614870295887855,1.03371317267288,0.727067458955011,0.712994756769443,3.79244109522979,3.16255825724996,4.12542172992747,3.06395645178409,0,0.129358683782755,0,0,1.42695054081656,0.987294123612726,2.13125464380219,0,0.21183207086382,0,0.16488625294148,1.29171541356724,0,0,0,2.04036585640896,0,0,0,0.555583582109135,0,0,0,0.169978429993855,0.279902904647316,0,0.954670618015114,0,0.203319467126849,0.648032044930808,0,1.52853794622324,1.07891477107857,5.04186079924549,0,2.20345454596048,1.24267862617385,0,0,0,0,0,0,0,0.911430693907651,0,0,0,0,0,0,0,0,0,0.360586348559907,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0.798049746802062,0.341467211508268,2.91728060481953,3.98265008993166,4.22840069435032,4.22268782823069,5.56294654545014,7.06022261101994,4.54854981174835,3.8021894983536,4.14977951049368,3.7456602987953,4.09760975391163,3.84817642002609,3.33405583898152,4.05595140806994,2.70072908649187,4.53294490883637,5.15196220470391,2.74295401908332,3.54951612318675,4.5302876089991,4.65108533223451,4.04670335785922,4.82303264982556,3.84148743032822,2.10455769150274,3.66671107383827,3.92799590160417,2.72860541685601,3.34915240076916,5.32000356120596,4.02835787083512,5.78719832943424,0,7.95367468714389,12.4625211348013,1.14772999241306,0.882365676478062,0 | ||
|short_description=p3@Gne | |short_description=p3@Gne | ||
}} | }} |
Latest revision as of 00:32, 27 September 2015
Short description: | p3@Gne |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gne_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000173274_5end |
EntrezGene: | Gne |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 8.34e-21 | 22 |
epithelial sac | 8.34e-21 | 22 |
digestive gland | 8.34e-21 | 22 |
epithelium of foregut-midgut junction | 8.34e-21 | 22 |
anatomical boundary | 8.34e-21 | 22 |
hepatobiliary system | 8.34e-21 | 22 |
foregut-midgut junction | 8.34e-21 | 22 |
hepatic diverticulum | 8.34e-21 | 22 |
liver primordium | 8.34e-21 | 22 |
septum transversum | 8.34e-21 | 22 |
liver bud | 8.34e-21 | 22 |
exocrine gland | 4.84e-20 | 25 |
exocrine system | 4.84e-20 | 25 |
digestive tract diverticulum | 1.68e-19 | 23 |
sac | 1.68e-19 | 23 |
trunk mesenchyme | 8.34e-09 | 45 |
abdomen element | 4.80e-08 | 49 |
abdominal segment element | 4.80e-08 | 49 |
abdominal segment of trunk | 4.80e-08 | 49 |
abdomen | 4.80e-08 | 49 |
digestive system | 1.09e-07 | 116 |
digestive tract | 1.09e-07 | 116 |
primitive gut | 1.09e-07 | 116 |
intestine | 1.23e-07 | 31 |
endoderm-derived structure | 2.57e-07 | 118 |
endoderm | 2.57e-07 | 118 |
presumptive endoderm | 2.57e-07 | 118 |
subdivision of digestive tract | 3.15e-07 | 114 |
gut epithelium | 5.28e-07 | 55 |