FFCP PHASE1:Mm9::chr19:6106122..6106133,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=131 | |MCL_coexpression_id=131 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:6106122..6106133,+ | |||
|description=CAGE_peak_at_chr19:6106122..6106133,+ | |description=CAGE_peak_at_chr19:6106122..6106133,+ | ||
|id=chr19:6106122..6106133,+ | |id=chr19:6106122..6106133,+ | ||
|ontology_enrichment_celltype=CL:0000075!1.37e-18!7;CL:0000239!1.15e-16!6;CL:0000677!1.15e-16!6;CL:0000212!1.15e-16!6;CL:0000584!1.15e-16!6;CL:0002563!7.09e-11!9;CL:0002251!7.09e-11!9;CL:0000066!2.35e-09!25;CL:0000473!2.53e-09!3;CL:0000627!2.53e-09!3;CL:0000682!2.53e-09!3 | |ontology_enrichment_celltype=CL:0000075!1.37e-18!7;CL:0000239!1.15e-16!6;CL:0000677!1.15e-16!6;CL:0000212!1.15e-16!6;CL:0000584!1.15e-16!6;CL:0002563!7.09e-11!9;CL:0002251!7.09e-11!9;CL:0000066!2.35e-09!25;CL:0000473!2.53e-09!3;CL:0000627!2.53e-09!3;CL:0000682!2.53e-09!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.03e-29,6;CL:0000677,2.03e-29,6;CL:0000584,2.03e-29,6;CL:0000075,2.63e-25,7;CL:0002563,8.21e-20,9;CL:0002251,8.21e-20,9;CL:0002076,4.38e-12,15;CL:0000066,4.33e-11,25;CL:0000223,3.63e-09,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.93e-25!15;UBERON:0001242!1.61e-20!13;UBERON:0000060!1.61e-20!13;UBERON:0001262!1.61e-20!13;UBERON:0004786!1.61e-20!13;UBERON:0000160!2.39e-19!43;UBERON:0004923!6.62e-15!24;UBERON:0005409!6.37e-13!59;UBERON:0000485!1.84e-11!11;UBERON:0003350!7.09e-11!9;UBERON:0004808!7.09e-11!9;UBERON:0001277!7.09e-11!9;UBERON:0000331!1.10e-09!3;UBERON:0002116!1.10e-09!3;UBERON:0001204!1.10e-09!3;UBERON:0001168!1.10e-09!3 | |ontology_enrichment_uberon=UBERON:0000344!1.93e-25!15;UBERON:0001242!1.61e-20!13;UBERON:0000060!1.61e-20!13;UBERON:0001262!1.61e-20!13;UBERON:0004786!1.61e-20!13;UBERON:0000160!2.39e-19!43;UBERON:0004923!6.62e-15!24;UBERON:0005409!6.37e-13!59;UBERON:0000485!1.84e-11!11;UBERON:0003350!7.09e-11!9;UBERON:0004808!7.09e-11!9;UBERON:0001277!7.09e-11!9;UBERON:0000331!1.10e-09!3;UBERON:0002116!1.10e-09!3;UBERON:0001204!1.10e-09!3;UBERON:0001168!1.10e-09!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.31e-36,15;UBERON:0001242,1.76e-30,13;UBERON:0001262,1.76e-30,13;UBERON:0004786,1.76e-30,13;UBERON:0004923,2.01e-22,24;UBERON:0003350,8.21e-20,9;UBERON:0004808,8.21e-20,9;UBERON:0001277,8.21e-20,9;UBERON:0000485,2.63e-16,11;UBERON:0000331,6.26e-16,3;UBERON:0002116,6.26e-16,3;UBERON:0001204,6.26e-16,3;UBERON:0001168,6.26e-16,3;UBERON:0000160,6.80e-13,31;UBERON:0003199,3.34e-12,1;UBERON:0002108,3.35e-12,4;UBERON:0005409,1.61e-08,47;UBERON:0001962,9.80e-07,2;UBERON:0001961,9.80e-07,2;UBERON:0001744,9.80e-07,2 | |||
|phase1_expression=0,1.39590163055744,1.36499771816861,2.11724947914781,3.00537437967808,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,1.60586496747019,1.14846392823004,0.86152399231815,0.861884930743556,7.41091335879858,2.52030129759931,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0.329397909448022,0.502670417600539,0.596869416123452,0.38992817423824,0.898819408654221,0,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,1.39590163055744,1.36499771816861,2.11724947914781,3.00537437967808,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,1.60586496747019,1.14846392823004,0.86152399231815,0.861884930743556,7.41091335879858,2.52030129759931,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0.329397909448022,0.502670417600539,0.596869416123452,0.38992817423824,0.898819408654221,0,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr19:6106122..6106133,+ | |short_description=p@chr19:6106122..6106133,+ | ||
}} | }} |
Latest revision as of 11:57, 4 August 2015
Short description: | p@chr19:6106122..6106133, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:6106122..6106133, + |
Coexpression cluster: | MCL_coexpression_mm9:131 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.03e-29 | 6 |
gut absorptive cell | 2.03e-29 | 6 |
enterocyte | 2.03e-29 | 6 |
columnar/cuboidal epithelial cell | 2.63e-25 | 7 |
intestinal epithelial cell | 8.21e-20 | 9 |
epithelial cell of alimentary canal | 8.21e-20 | 9 |
endo-epithelial cell | 4.38e-12 | 15 |
epithelial cell | 4.33e-11 | 25 |
endodermal cell | 3.63e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 9.31e-36 | 15 |
intestinal mucosa | 1.76e-30 | 13 |
wall of intestine | 1.76e-30 | 13 |
gastrointestinal system mucosa | 1.76e-30 | 13 |
organ component layer | 2.01e-22 | 24 |
epithelium of mucosa | 8.21e-20 | 9 |
gastrointestinal system epithelium | 8.21e-20 | 9 |
intestinal epithelium | 8.21e-20 | 9 |
simple columnar epithelium | 2.63e-16 | 11 |
ileal mucosa | 6.26e-16 | 3 |
ileum | 6.26e-16 | 3 |
mucosa of small intestine | 6.26e-16 | 3 |
wall of small intestine | 6.26e-16 | 3 |
intestine | 6.80e-13 | 31 |
egg chamber | 3.34e-12 | 1 |
small intestine | 3.35e-12 | 4 |
gastrointestinal system | 1.61e-08 | 47 |
gut-associated lymphoid tissue | 9.80e-07 | 2 |
mucosa-associated lymphoid tissue | 9.80e-07 | 2 |
lymphoid tissue | 9.80e-07 | 2 |