FFCP PHASE1:Hg19::chr2:31607343..31607364,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:31607343..31607364,-
|short_description=p2@XDH
|description=CAGE_peak_2_at_XDH_5end
|association_with_transcript=-82bp_to_ENST00000476043_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7498 | |EntrezGene=7498 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12805 | |HGNC=12805 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-82bp_to_ENST00000476043_5end | |||
|cluster_id=chr2:31607343..31607364,- | |||
|description=CAGE_peak_2_at_XDH_5end | |||
|id=chr2:31607343..31607364,- | |||
|ontology_enrichment_celltype=CL:0000066!5.65e-10!254;CL:0002076!5.18e-09!43;CL:0000548!1.76e-08!679;CL:0000004!1.76e-08!679;CL:0000255!1.76e-08!679;CL:0000012!2.98e-08!682;CL:0000220!1.53e-07!246;CL:0002321!2.44e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002621;1.67e-12;3!CL:0002076;4.63e-11;42!CL:0000317;1.23e-08;2!CL:1000448;1.23e-08;2!CL:0002308;1.23e-08;2!CL:0002140;1.23e-08;2!CL:0000622;1.92e-07;5!CL:0002368;3.75e-07;13!CL:0002159;4.93e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,6.39e-13,3;CL:0002076,9.44e-13,42;CL:0000223,4.90e-10,58;CL:0000066,2.79e-09,253;CL:0000317,1.82e-08,2;CL:1000448,1.82e-08,2;CL:0002308,1.82e-08,2;CL:0002140,1.82e-08,2;CL:0002368,1.84e-07,13;CL:0000622,3.41e-07,5;CL:0002159,5.99e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.56e-09!14;DOID:120!1.49e-08!27;DOID:193!1.22e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.79e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,7.58e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0003102!8.45e-09!95;UBERON:0000992!5.64e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.67e-12;3!UBERON:0002419;1.23e-08;2!UBERON:0007771;1.23e-08;2!UBERON:0003297;1.23e-08;2!UBERON:0001821;1.23e-08;2!UBERON:0003487;1.23e-08;2!UBERON:0001820;1.23e-08;2!UBERON:0004807;6.07e-08;22!UBERON:0003729;2.73e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,6.39e-13,3;UBERON:0002419,1.82e-08,2;UBERON:0007771,1.82e-08,2;UBERON:0003297,1.82e-08,2;UBERON:0001821,1.82e-08,2;UBERON:0003487,1.82e-08,2;UBERON:0001820,1.82e-08,2;UBERON:0005089,1.82e-08,2;UBERON:0005088,1.82e-08,2;UBERON:0003729,2.84e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,0,0.697801167972428,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,1.45990461090791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32409180813219,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0.23486899728753,0,0.140450806702248,0.816616685019573,0.368502951935304,0.103325781175765,0,0,0,0,0.168336113954066,0,0.554128230968366,0,0,0,0,0.89694817844431,0.213557388818567,0.211931901159562,0.300091096084402,0.412210116953756,0,0,1.18143432568886,0,0,0.0920498986422993,0.323292113637624,0.710019185033229,0.10075209822764,0,1.35282597214308,2.45471508531751,1.72082757233402,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,2.08525542276389,0,0.703702806881416,1.01847289674383,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,3.52762469217605,2.26840155587818,4.38836761243957,3.77824120068151,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,4.27910715122155,0.289562613335158,0,0.358121926479791,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.535286966391485,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0,0,0,0,0,0,0.328508624055237,0,0.116210378459959,0,1.00253235151642,0.736647911487171,0,0.182091168006717,0,0,1.00119938235739,0,0,0.527758144464379,0,0,0,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0,0,1.14853107599234,1.30012049207304,0,0.193341436584244,0.154048617114644,0,0.137836572484531,0,0,0,0.178064071293475,1.4875642382488,0.960950336825531,1.40373983744043,0,0,1.25924938732256,0,0,1.06461206063404,0.869932992075073,0.37064843820784,0,0.372158369359667,0,0,0.255897791311334,0,0.636406495851874,0,0,0,0.117812402345686,0.404364963146632,0,1.26377536871694,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0,0,0,0,0.354761064070598,0,0,0,0,1.34710957815717,1.34060455107157,0,0,0.86101074534246,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0.667852230137435,0.16480387422676,0,0,0,0,0,0,0,0.629078458031288,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32930774541437,0.330991955875499,2.5114633472578,1.19472429772959,1.99226682220855,0.693373365065693,0,0.195984794828755,15.0612427384096,0,1.20390222730132,0.387025325156341,0.219267951258557,0.164230914106418,0,0,0,0.959293472527256,0.993573058514948,0,0.195551382734803,1.28254112402454,0,0,0,0,0,2.44893156579854,0,0.471388069233591,0.271808412147228,0.418411385249333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422401346077626,0,2.1110671705139,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,1.40963004463334,0,0,0,0,0,0,17.8735552175651,0,0,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0.999843263696853,0,0,1.41159491818903,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0.151230923763239,0.621748802331122,0.443565449968902,0.477890301491107,0,0.621051827505038,0.829412415681711,0.53168342911599,1.04349012362347,0,0.380805212168795,0.406870733204662,0.363697318405119,0.429642228169954,0.464033759878494,0.398095888698616,0,0,0,1.26184898228651,0,0.428883182749851,0,0,0,0,0,0,0.219284049578707,1.23682402162117,0.38582807654183,0,0,0,0,0,0,0,0,0,0.737318726261158,0.422624246717254,0,0,0,0.567515953566836,0,0.559518030877778,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17777262201231,0,0,0.577628330751691,0.381382095467167,1.3807198521202,0,0,1.21023041222112,0,0,0.163771917510097,1.47856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,2.7438081509987,0,0,0.354581522651905,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,1.03608082081518,0,0,0,1.65664801022791,1.27820107138737,0,0,0.62041277132864,0,0.335566295393377,0.490751168076215,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,1.05868461514708,2.08627553391837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0.325613074443898,0.533636729388577,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,0,0.697801167972428,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,1.45990461090791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32409180813219,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0.23486899728753,0,0.140450806702248,0.816616685019573,0.368502951935304,0.103325781175765,0,0,0,0,0.168336113954066,0,0.554128230968366,0,0,0,0,0.89694817844431,0.213557388818567,0.211931901159562,0.300091096084402,0.412210116953756,0,0,1.18143432568886,0,0,0.0920498986422993,0.323292113637624,0.710019185033229,0.10075209822764,0,1.35282597214308,2.45471508531751,1.72082757233402,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,2.08525542276389,0,0.703702806881416,1.01847289674383,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,3.52762469217605,2.26840155587818,4.38836761243957,3.77824120068151,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,4.27910715122155,0.289562613335158,0,0.358121926479791,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.535286966391485,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0,0,0,0,0,0,0.328508624055237,0,0.116210378459959,0,1.00253235151642,0.736647911487171,0,0.182091168006717,0,0,1.00119938235739,0,0,0.527758144464379,0,0,0,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0,0,1.14853107599234,1.30012049207304,0,0.193341436584244,0.154048617114644,0,0.137836572484531,0,0,0,0.178064071293475,1.4875642382488,0.960950336825531,1.40373983744043,0,0,1.25924938732256,0,0,1.06461206063404,0.869932992075073,0.37064843820784,0,0.372158369359667,0,0,0.255897791311334,0,0.636406495851874,0,0,0,0.117812402345686,0.404364963146632,0,1.26377536871694,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0,0,0,0,0.354761064070598,0,0,0,0,1.34710957815717,1.34060455107157,0,0,0.86101074534246,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0.667852230137435,0.16480387422676,0,0,0,0,0,0,0,0.629078458031288,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32930774541437,0.330991955875499,2.5114633472578,1.19472429772959,1.99226682220855,0.693373365065693,0,0.195984794828755,15.0612427384096,0,1.20390222730132,0.387025325156341,0.219267951258557,0.164230914106418,0,0,0,0.959293472527256,0.993573058514948,0,0.195551382734803,1.28254112402454,0,0,0,0,0,2.44893156579854,0,0.471388069233591,0.271808412147228,0.418411385249333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422401346077626,0,2.1110671705139,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,1.40963004463334,0,0,0,0,0,0,17.8735552175651,0,0,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0.999843263696853,0,0,1.41159491818903,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0.151230923763239,0.621748802331122,0.443565449968902,0.477890301491107,0,0.621051827505038,0.829412415681711,0.53168342911599,1.04349012362347,0,0.380805212168795,0.406870733204662,0.363697318405119,0.429642228169954,0.464033759878494,0.398095888698616,0,0,0,1.26184898228651,0,0.428883182749851,0,0,0,0,0,0,0.219284049578707,1.23682402162117,0.38582807654183,0,0,0,0,0,0,0,0,0,0.737318726261158,0.422624246717254,0,0,0,0.567515953566836,0,0.559518030877778,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17777262201231,0,0,0.577628330751691,0.381382095467167,1.3807198521202,0,0,1.21023041222112,0,0,0.163771917510097,1.47856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,2.7438081509987,0,0,0.354581522651905,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,1.03608082081518,0,0,0,1.65664801022791,1.27820107138737,0,0,0.62041277132864,0,0.335566295393377,0.490751168076215,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,1.05868461514708,2.08627553391837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0.325613074443898,0.533636729388577,0,0,0,0,0,0,0,0 | ||
|short_description=p2@XDH | |||
}} | }} |
Latest revision as of 22:50, 16 September 2015
Short description: | p2@XDH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_XDH_5end |
Coexpression cluster: | NA |
Association with transcript: | -82bp_to_ENST00000476043_5end |
EntrezGene: | XDH |
HGNC: | 12805 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 6.39e-13 | 3 |
endo-epithelial cell | 9.44e-13 | 42 |
endodermal cell | 4.90e-10 | 58 |
epithelial cell | 2.79e-09 | 253 |
sebum secreting cell | 1.82e-08 | 2 |
epithelial cell of sweat gland | 1.82e-08 | 2 |
epithelial cell of skin gland | 1.82e-08 | 2 |
acinar cell of sebaceous gland | 1.82e-08 | 2 |
respiratory epithelial cell | 1.84e-07 | 13 |
acinar cell | 3.41e-07 | 5 |
general ecto-epithelial cell | 5.99e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 6.39e-13 | 3 |
skin gland | 1.82e-08 | 2 |
epidermis gland | 1.82e-08 | 2 |
gland of integumental system | 1.82e-08 | 2 |
sebaceous gland | 1.82e-08 | 2 |
skin sebaceous gland | 1.82e-08 | 2 |
sweat gland | 1.82e-08 | 2 |
sweat gland placode | 1.82e-08 | 2 |
sebaceous gland placode | 1.82e-08 | 2 |
mouth mucosa | 2.84e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 7.58e-10 | 14 |