FFCP PHASE1:Hg19::chr2:46301037..46301050,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:46301037..46301050,+
|short_description=p6@PRKCE
|description=CAGE_peak_6_at_PRKCE_5end
|association_with_transcript=102bp_to_ENST00000480633_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5581 | |EntrezGene=5581 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9401 | |HGNC=9401 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=102bp_to_ENST00000480633_5end | |||
|cluster_id=chr2:46301037..46301050,+ | |||
|description=CAGE_peak_6_at_PRKCE_5end | |||
|id=chr2:46301037..46301050,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.48e-11!254;CL:0002139!5.09e-10!24;CL:0000213!5.48e-09!57;CL:0000215!5.48e-09!57;CL:0000057!1.80e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.27e-14;3!CL:0002138;1.45e-12;6!CL:0000197;6.22e-07;6!CL:0000098;6.22e-07;6!CL:0002167;6.22e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.28e-14,3;CL:0005020,1.31e-12,6;CL:0002138,1.31e-12,6;CL:0005022,1.31e-12,6;CL:0000197,3.83e-07,6;CL:0000098,3.83e-07,6;CL:0002167,3.83e-07,6 | |||
|ontology_enrichment_development_v019=CL:0005022;1.45e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;4.79e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,4.20e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001444!5.23e-07!48;UBERON:0000487!9.02e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.27e-14;3!UBERON:0000920;1.27e-14;3!UBERON:0000488;1.87e-10;4!UBERON:0001473;1.95e-09;8!UBERON:0004536;1.95e-09;8!UBERON:0006558;1.95e-09;8!UBERON:0001801;1.17e-07;14!UBERON:0002465;1.49e-07;10!UBERON:0005631;1.94e-07;10!UBERON:0000158;1.94e-07;10!UBERON:0002203;4.12e-07;6!UBERON:0001768;4.12e-07;6!UBERON:0002200;4.12e-07;6!UBERON:0001456;6.09e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.28e-14,3;UBERON:0000488,1.47e-10,4;UBERON:0001473,1.81e-09,8;UBERON:0004536,1.81e-09,8;UBERON:0006558,1.81e-09,8;UBERON:0001801,1.30e-07,14;UBERON:0002465,1.41e-07,10;UBERON:0002203,3.52e-07,6;UBERON:0001768,3.52e-07,6;UBERON:0002200,3.52e-07,6 | |||
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| ||
|short_description=p6@PRKCE | |||
}} | }} |
Latest revision as of 10:18, 17 September 2015
Short description: | p6@PRKCE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PRKCE_5end |
Coexpression cluster: | NA |
Association with transcript: | 102bp_to_ENST00000480633_5end |
EntrezGene: | PRKCE |
HGNC: | 9401 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.28e-14 | 3 |
lymphangioblast | 1.31e-12 | 6 |
endothelial cell of lymphatic vessel | 1.31e-12 | 6 |
vascular lymphangioblast | 1.31e-12 | 6 |
receptor cell | 3.83e-07 | 6 |
sensory epithelial cell | 3.83e-07 | 6 |
olfactory epithelial cell | 3.83e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.28e-14 | 3 |
atypical epithelium | 1.47e-10 | 4 |
lymphatic vessel | 1.81e-09 | 8 |
lymph vasculature | 1.81e-09 | 8 |
lymphatic part of lymphoid system | 1.81e-09 | 8 |
anterior segment of eyeball | 1.30e-07 | 14 |
lymphoid system | 1.41e-07 | 10 |
vasculature of eye | 3.52e-07 | 6 |
uvea | 3.52e-07 | 6 |
vasculature of head | 3.52e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 4.20e-10 | 2 |