FFCP PHASE1:Hg19::chr2:74570520..74570547,-: Difference between revisions
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|id=chr2:74570520..74570547,-
|short_description=p6@SLC4A5
|description=CAGE_peak_6_at_SLC4A5_5end
|association_with_transcript=0bp_to_ENST00000346834,ENST000003594...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57835 | |EntrezGene=57835 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18168 | |HGNC=18168 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BY07,E7ETM3,C9JW32,E7EWF7 | |UniProt=Q9BY07,E7ETM3,C9JW32,E7EWF7 | ||
|association_with_transcript=0bp_to_ENST00000346834,ENST00000359484,ENST00000377634,ENST00000394019,ENST00000423644,ENST00000436454,ENST00000451608,NM_133478,uc002skn.2_5end | |||
|cluster_id=chr2:74570520..74570547,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_6_at_SLC4A5_5end | |||
|id=chr2:74570520..74570547,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;9.18e-26;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.80e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002022!9.85e-34!1;UBERON:0000473!1.22e-17!8;UBERON:0003135!4.00e-13!11;UBERON:0000991!2.44e-07!21;UBERON:0009196!2.44e-07!21;UBERON:0009117!2.44e-07!21;UBERON:0005564!2.44e-07!21;UBERON:0004176!4.79e-07!22;UBERON:0003101!4.79e-07!22;UBERON:0000079!4.79e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22 | |||
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|short_description=p6@SLC4A5 | |||
}} | }} |
Latest revision as of 10:40, 18 September 2015
Short description: | p6@SLC4A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC4A5_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000346834, ENST00000359484, ENST00000377634, ENST00000394019, ENST00000423644, ENST00000436454, ENST00000451608, NM_133478, uc002skn.2_5end |
EntrezGene: | SLC4A5 |
HGNC: | 18168 |
UniProt: | Q9BY07E7ETM3C9JW32E7EWF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.80e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |