FFCP PHASE1:Hg19::chr2:74726710..74726736,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:74726710..74726736,-
|short_description=p3@LBX2
|description=CAGE_peak_3_at_LBX2_5end
|association_with_transcript=-41bp_to_uc002slv.3_5end
|EntrezGene=85...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=85474 | |EntrezGene=85474 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15525 | |HGNC=15525 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-41bp_to_uc002slv.3_5end | |||
|cluster_id=chr2:74726710..74726736,- | |||
|description=CAGE_peak_3_at_LBX2_5end | |||
|id=chr2:74726710..74726736,- | |||
|ontology_enrichment_celltype=CL:0000055!4.93e-07!180;CL:0000057!7.89e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000333;3.01e-20;5!CL:0000182;3.32e-17;12!CL:0002573;1.28e-08;2!CL:0002321;8.32e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.93e-17,12;CL:0002573,7.42e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.91e-09;11!UBERON:0009497;1.57e-07;13 | |||
|ontology_enrichment_disease=DOID:171!1.52e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;2.22e-21;10!DOID:169;6.68e-17;6!DOID:3095;1.43e-12;22!DOID:2994;1.43e-12;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.51e-21,10;DOID:169,5.93e-17,6;DOID:3095,1.07e-12,22;DOID:2994,1.07e-12,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000010;8.24e-24;8!UBERON:0000013;3.01e-20;5!UBERON:0002410;3.01e-20;5!UBERON:0002107;1.14e-10;19!UBERON:0006925;1.14e-10;19!UBERON:0002423;5.63e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,4.21e-24,8;UBERON:0000013,2.61e-20,5;UBERON:0002410,2.61e-20,5;UBERON:0002107,1.05e-10,19;UBERON:0006925,1.05e-10,19;UBERON:0008836,1.05e-10,19;UBERON:0008835,3.61e-09,22;UBERON:0003894,3.61e-09,22;UBERON:0009854,9.57e-09,23;UBERON:0007499,5.32e-08,25;UBERON:0009497,5.32e-08,25;UBERON:0000015,5.32e-08,25;UBERON:0002423,5.32e-08,25;UBERON:0006235,5.32e-08,25;UBERON:0004161,5.32e-08,25;UBERON:0009856,1.14e-07,26 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0,0.37129905888014,0.994192127183747,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0,0,0,0.491337269247072,0.516628905878827,0,0.741800787835671,0,0.718618141816238,0.168336113954066,0,0.277064115484183,1.31693286264251,0.30648779579902,0.901428353439581,0.113432183160021,0,0.213557388818567,0,0.300091096084402,0.309157587715317,0,0,0.337552664482532,0,0.504867548488229,0.184099797284599,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,2.18986415445498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,1.26755034821831,0,1.18157981336281,0,0.860919069801795,0,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0.531876233169741,1.04007436911366,0,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,2.50085260529839,0.542530047399471,0,0,0,0,0.300946099727719,4.5481500811197,0,1.32845119707087,0.184369168541703,0.434418072340414,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.308419387605311,0.355123450626254,0.821271560138091,0,0.697262270759755,1.32945394550784,0,0.0920809889358963,0.114814448164607,0,0.655622074797121,0,0.231046011313244,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0.447749509444357,0,0,0.256450125116389,0,0,0.824328093181778,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0.322260734604821,0,0.0852266274161009,0.0890320356467374,0,0,0,0.10115778085555,0,0,0.6970372701606,0,0,0,0,0,0.372158369359667,0,0,0.255897791311334,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0.272999822815972,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0.294747123039363,0.35667105148125,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,10.0632801485112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,1.55488378577335,0.216388639742091,0,0,1.22206028986725,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.343972064943233,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0.262887354279314,0.279282401272254,0,0,0.199679000498991,0,0,0,0.360299883542404,2.32991899054908,2.6786281984456,1.97798060114799,2.56133466645903,0,0,0,0,0,0.412618309791701,0.415440338029185,0,0,0,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0.326587360109409,0,0,3.06698439213759,0,0.293104467356165,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0.298509605773748,0.467426619694449,1.10961172300523,1.13641803165053,1.0062716070103,0.889811221596536,0,0.151230923763239,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0,0.464033759878494,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0.920529751259204,0,0,2.81367616868034,11.3216051966516,5.81883984866817,7.64467467344097,0.848662649770126,1.70059936081346,1.73510069962603,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17259853526191,0,0,0,0,0,1.77498001095848,1.95990830946063,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0,0,0.231522474323834,9.39806110167016,0,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,0,0.473314686579554,0,0,1.0580536810308,0.743990036333503,0,0.865253124247578,0.378499274505237,0.109265571963696,1.77377901416012,0.509944148709909,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0.213454691755431,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0.181678379270557,0,0.281908808191942,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0,0.37129905888014,0.994192127183747,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0,0,0,0.491337269247072,0.516628905878827,0,0.741800787835671,0,0.718618141816238,0.168336113954066,0,0.277064115484183,1.31693286264251,0.30648779579902,0.901428353439581,0.113432183160021,0,0.213557388818567,0,0.300091096084402,0.309157587715317,0,0,0.337552664482532,0,0.504867548488229,0.184099797284599,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,2.18986415445498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,1.26755034821831,0,1.18157981336281,0,0.860919069801795,0,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0.531876233169741,1.04007436911366,0,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,2.50085260529839,0.542530047399471,0,0,0,0,0.300946099727719,4.5481500811197,0,1.32845119707087,0.184369168541703,0.434418072340414,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.308419387605311,0.355123450626254,0.821271560138091,0,0.697262270759755,1.32945394550784,0,0.0920809889358963,0.114814448164607,0,0.655622074797121,0,0.231046011313244,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0.447749509444357,0,0,0.256450125116389,0,0,0.824328093181778,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0.322260734604821,0,0.0852266274161009,0.0890320356467374,0,0,0,0.10115778085555,0,0,0.6970372701606,0,0,0,0,0,0.372158369359667,0,0,0.255897791311334,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0.272999822815972,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0.294747123039363,0.35667105148125,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,10.0632801485112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,1.55488378577335,0.216388639742091,0,0,1.22206028986725,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.343972064943233,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0.262887354279314,0.279282401272254,0,0,0.199679000498991,0,0,0,0.360299883542404,2.32991899054908,2.6786281984456,1.97798060114799,2.56133466645903,0,0,0,0,0,0.412618309791701,0.415440338029185,0,0,0,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0.326587360109409,0,0,3.06698439213759,0,0.293104467356165,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0.298509605773748,0.467426619694449,1.10961172300523,1.13641803165053,1.0062716070103,0.889811221596536,0,0.151230923763239,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0,0.464033759878494,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0.920529751259204,0,0,2.81367616868034,11.3216051966516,5.81883984866817,7.64467467344097,0.848662649770126,1.70059936081346,1.73510069962603,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17259853526191,0,0,0,0,0,1.77498001095848,1.95990830946063,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0,0,0.231522474323834,9.39806110167016,0,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,0,0.473314686579554,0,0,1.0580536810308,0.743990036333503,0,0.865253124247578,0.378499274505237,0.109265571963696,1.77377901416012,0.509944148709909,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0.213454691755431,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p3@LBX2 | |||
}} | }} |
Latest revision as of 11:21, 18 September 2015
Short description: | p3@LBX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LBX2_5end |
Coexpression cluster: | NA |
Association with transcript: | -41bp_to_uc002slv.3_5end |
EntrezGene: | LBX2 |
HGNC: | 15525 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.93e-17 | 12 |
Schwann cell | 7.42e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 4.21e-24 | 8 |
sympathetic nervous system | 2.61e-20 | 5 |
autonomic nervous system | 2.61e-20 | 5 |
liver | 1.05e-10 | 19 |
digestive gland | 1.05e-10 | 19 |
liver bud | 1.05e-10 | 19 |
hepatic diverticulum | 3.61e-09 | 22 |
liver primordium | 3.61e-09 | 22 |
digestive tract diverticulum | 9.57e-09 | 23 |
epithelial sac | 5.32e-08 | 25 |
epithelium of foregut-midgut junction | 5.32e-08 | 25 |
anatomical boundary | 5.32e-08 | 25 |
hepatobiliary system | 5.32e-08 | 25 |
foregut-midgut junction | 5.32e-08 | 25 |
septum transversum | 5.32e-08 | 25 |
sac | 1.14e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.51e-21 | 10 |
neuroendocrine tumor | 5.93e-17 | 6 |
germ cell and embryonal cancer | 1.07e-12 | 22 |
germ cell cancer | 1.07e-12 | 22 |