FFCP PHASE1:Hg19::chr3:10290228..10290249,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:10290228..10290249,+
|short_description=p2@TATDN2
|description=CAGE_peak_2_at_TATDN2_5end
|association_with_transcript=51bp_to_NM_014760,uc003bvf.2,uc003bv...") |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9797 | |EntrezGene=9797 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28988 | |HGNC=28988 | ||
|TSSclassifier=strong | |||
|UniProt=Q93075 | |UniProt=Q93075 | ||
|association_with_transcript=51bp_to_NM_014760,uc003bvf.2,uc003bvg.2,uc011atr.1_5end | |||
|cluster_id=chr3:10290228..10290249,+ | |||
|description=CAGE_peak_2_at_TATDN2_5end | |||
|id=chr3:10290228..10290249,+ | |||
|ontology_enrichment_celltype=CL:0000012!4.49e-07!682;CL:0000548!5.36e-07!679;CL:0000004!5.36e-07!679;CL:0000255!5.36e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0002188;1.66e-07;5!CL:1000746;3.92e-07;7!CL:1000612;3.92e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,1.78e-07,5;CL:1000746,2.89e-07,7;CL:1000612,2.89e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;3.92e-07;7!UBERON:0001229;3.92e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.83e-08,117;UBERON:0010532,2.89e-07,7;UBERON:0000074,2.89e-07,7;UBERON:0001229,2.89e-07,7;UBERON:0001230,2.89e-07,7;UBERON:0003220,2.89e-07,7;UBERON:0005749,2.89e-07,7;UBERON:0004199,2.89e-07,7;UBERON:0004209,2.89e-07,7;UBERON:0004198,2.89e-07,7 | |||
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| ||
|short_description=p2@TATDN2 | |||
}} | }} |
Latest revision as of 08:44, 19 September 2015
Short description: | p2@TATDN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TATDN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 51bp_to_NM_014760, uc003bvf.2, uc003bvg.2, uc011atr.1_5end |
EntrezGene: | TATDN2 |
HGNC: | 28988 |
UniProt: | Q93075 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 1.78e-07 | 5 |
glomerular cell | 2.89e-07 | 7 |
kidney corpuscule cell | 2.89e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 2.83e-08 | 117 |
primitive nephron | 2.89e-07 | 7 |
renal glomerulus | 2.89e-07 | 7 |
renal corpuscle | 2.89e-07 | 7 |
glomerular capsule | 2.89e-07 | 7 |
metanephric mesenchyme | 2.89e-07 | 7 |
glomerular tuft | 2.89e-07 | 7 |
S-shaped body | 2.89e-07 | 7 |
renal vesicle | 2.89e-07 | 7 |
comma-shaped body | 2.89e-07 | 7 |