FFCP PHASE1:Hg19::chr3:11685476..11685487,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:11685476..11685487,-
|short_description=p10@VGLL4
|description=CAGE_peak_10_at_VGLL4_5end
|association_with_transcript=-78bp_to_ENST00000430365,NM_00112821...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9686 | |EntrezGene=9686 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28966 | |HGNC=28966 | ||
|TSSclassifier=strong | |||
|UniProt=G5E9M7,Q14135 | |UniProt=G5E9M7,Q14135 | ||
|association_with_transcript=-78bp_to_ENST00000430365,NM_001128219,uc010hdx.1_5end | |||
|cluster_id=chr3:11685476..11685487,- | |||
|description=CAGE_peak_10_at_VGLL4_5end | |||
|id=chr3:11685476..11685487,- | |||
|ontology_enrichment_celltype=CL:0002319!8.24e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.34e-12;25!CL:0000128;1.51e-08;7!CL:0000126;1.51e-08;7!CL:0000127;1.51e-08;7!CL:0000095;6.01e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.25e-12,25;CL:0000133,8.74e-11,59;CL:0000128,1.51e-08,7;CL:0000126,1.51e-08,7;CL:0000127,1.51e-08,7;CL:0002453,1.51e-08,7;CL:0000221,9.26e-08,72;CL:0000047,9.52e-08,8;CL:0000095,7.55e-07,17;CL:0000123,7.55e-07,17;CL:1000413,9.34e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.85e-12!86;UBERON:0000073!9.46e-12!94;UBERON:0001016!9.46e-12!94;UBERON:0001017!1.99e-11!82;UBERON:0000119!1.41e-09!312;UBERON:0000025!7.62e-09!194;UBERON:0000483!8.19e-09!309;UBERON:0002346!2.90e-08!90;UBERON:0000477!4.04e-08!286;UBERON:0000955!1.19e-07!69;UBERON:0006238!1.19e-07!69;UBERON:0003075!2.92e-07!86;UBERON:0007284!2.92e-07!86;UBERON:0006914!6.67e-07!25 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.85e-09,81;UBERON:0001016,1.32e-08,89;UBERON:0003915,9.34e-07,9;UBERON:0004700,9.34e-07,9;UBERON:0001917,9.34e-07,9 | |||
|phase1_expression=1.2717486548939,0.642301571672949,0.563817616383885,2.00146596706261,0,0.872338524100369,2.53299878168311,0,0,0.982935746006035,0,0,0,2.72285976512103,0.662794751455832,0,0,0,0,1.72369481307503,1.42800483870977,2.19418305034661,2.28988789704845,1.36874425072884,1.12988375635323,0.534893840235659,0.656804715599566,0.393553906568396,0,0,0,0,0,0,0.0774672005803016,0.284338464974843,0.587200878669695,0,0,0.651032612147555,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0,0,0,1.35426486594342,0.188242339542605,0,0,0,0,0.639337125799041,0,0.398927315243264,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0.526768169550154,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0,0,0,0.25618263945135,0.130059347559878,0.164437904603676,0.276350017785848,0.869409257205157,0.296573126324121,0,0,0.226618685395132,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,1.30361867064741,0.795285947051099,1.45990461090791,1.51255707462509,2.4390233720882,2.0202000709419,0.785874452986276,0,0,0,0,0.26591592103773,0.715471872916026,0,0,0.79504962946682,1.72046919021225,2.77712401286075,0.56530794192401,2.09749718104953,1.10047216776027,1.46296476575767,0.516833518338658,0,0.33472061276467,0,0,0.488124115096339,0.367663080345869,2.43042584364528,0.446498641420399,0.44905874525234,0.563057402416611,1.53316637465883,2.84779697870439,1.83201743930407,0,0,0,0.496971951695318,0.759783069987479,0.132409180813219,1.43418310374407,0.354668382198357,0,0,0.49333509683432,0.622422070799533,0.942974704487816,0.490385709340376,5.60022482286246,3.45705554687999,0,0,0.570471821544449,0.149448680551801,0,0.161872944368132,0,0,0.122834317311768,0,0,0.494533858557114,0.910161361938026,0.718618141816238,0.168336113954066,0,0,0,0.612975591598039,1.20190447125277,0.340296549480063,0,0,0.211931901159562,0.300091096084402,0,0.257640540045629,0,1.0126579934476,0.194874010322397,0,0.184099797284599,0,0,0,0.67824236924195,0,0,0,0.243947412259191,0.662648841607426,1.2781333715647,1.34759371519982,0.504641701751257,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0.196221465125346,0,1.4763109092493,1.40241773803446,0.4115740113314,2.94017422771084,0,0,0,2.6487785964879,0.245976877086227,0.514703430895577,0,0,0,0,0.325808305310325,0,0,0.695582429850461,2.46558257895225,0.577465791044295,0.462985512576611,0.380508304469197,0,0,0.492434012174795,0,0,0,0,0,0,0,0,0.985326475791887,0,0,0,0,0.190493682876507,1.52795370223311,0,3.4214489204541,1.02827492703324,0,0.285826432630578,1.34557301214433,3.05172048183296,0.80672114403045,2.45616259939778,0,0,0.26593811658487,0,0.514414748524284,0,0,1.85871391755592,0.542621605391443,0,0,1.06617584622764,0.791951872933429,0,0.871533458600294,0.299918973546171,0,0.502257091432126,0,0.479249710983165,0,0,0,0.821905290201534,0.895304816199478,0.224170287987055,0,0.646882724578552,0.256686072559497,4.57370323600434,3.90419561572865,1.54657762555539,1.17261385734044,1.91381625495949,0,0,0,1.2269149171914,1.00034104211935,0.271265023699736,0.623912584592421,0.356857977594324,0.157702415033935,0.35142424497814,0.601892199455438,0,1.03473071292505,0.664225598535437,0.184369168541703,0,8.81105208582333,11.3237329857582,0,0.215714200818617,0.106727557803444,0,0,0,1.24053903909388,0.61384789315225,0.561320188866147,1.15325234330131,0.511707249066704,0.64341568457443,0,0,0.355123450626254,0.410635780069046,0.519254429183621,0.348631135379878,0.483437798366489,0,0,0.114814448164607,0.182091168006717,0.262248829918848,0.451199612907412,0.231046011313244,0,1.46139224653261,0.844413031143006,1.13733384070897,0.510281115829547,0.215915916102139,0,2.16757150035082,0.501689773854853,0,0,0.447749509444357,0,0,0.256450125116389,0.656029291399411,2.60302715731442,0.103041011647722,0.640986253728404,0.41254749960294,0,0,1.6068392984416,0.773365746336976,1.54048617114644,0.767518373630648,0,0.751941714077915,0.435050081742686,0.93749290157711,1.51354460599453,0.165284915360978,0,0.127612712494584,0,0.464845549297286,0,0,0.616067160352178,1.06461206063404,0.869932992075073,0,0.143124886741991,0.744316738719335,0.632758849437452,0.38126038784765,0.255897791311334,0.42793898803392,0.318203247925937,0,0.179872457583315,0.54907405947211,0.235624804691373,0.606547444719948,0,0,0,0,1.05650146756755,0.136499911407986,0,0,0.551365343546124,0,0.438450885253763,0.578775534266688,0,0.608731130888112,0.6196469961995,0.563391205064483,0.573645408816206,0.491245205065606,0,0.354761064070598,0.633322905892992,0.987884678879706,0.379473173765715,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0.764637207142375,0,0,0.411362273086194,0,0,0,0.320472213382419,0,0,0.185803175125719,0.28853842595289,0.284567373393656,0.797131363644112,0.997896857164083,0.383010740264733,0,0.324621940274555,0.280797178113459,1.82587743226554,0,2.50634477090067,0.169291777801603,0.481764225311099,0,0,0.343505344755765,0.921722292925374,0.447352215784832,0,0.19538809540204,0.556812347790485,0,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| ||
|short_description=p10@VGLL4 | |||
}} | }} |
Latest revision as of 18:47, 19 September 2015
Short description: | p10@VGLL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_VGLL4_5end |
Coexpression cluster: | NA |
Association with transcript: | -78bp_to_ENST00000430365, NM_001128219, uc010hdx.1_5end |
EntrezGene: | VGLL4 |
HGNC: | 28966 |
UniProt: | G5E9M7Q14135 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.25e-12 | 25 |
neurectodermal cell | 8.74e-11 | 59 |
oligodendrocyte | 1.51e-08 | 7 |
macroglial cell | 1.51e-08 | 7 |
astrocyte | 1.51e-08 | 7 |
oligodendrocyte precursor cell | 1.51e-08 | 7 |
ectodermal cell | 9.26e-08 | 72 |
neuronal stem cell | 9.52e-08 | 8 |
neuron associated cell | 7.55e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 7.55e-07 | 17 |
endothelial cell of artery | 9.34e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.85e-09 | 81 |
nervous system | 1.32e-08 | 89 |
endothelial tube | 9.34e-07 | 9 |
arterial system endothelium | 9.34e-07 | 9 |
endothelium of artery | 9.34e-07 | 9 |