FFCP PHASE1:Hg19::chr3:138665921..138665932,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:138665921..138665932,-
|short_description=p6@FOXL2
|description=CAGE_peak_6_at_FOXL2_5end
|association_with_transcript=49bp_to_ENST00000330315,NM_023067,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=668 | |EntrezGene=668 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1092 | |HGNC=1092 | ||
|TSSclassifier=strong | |||
|UniProt=P58012,Q53ZD3 | |UniProt=P58012,Q53ZD3 | ||
|association_with_transcript=49bp_to_ENST00000330315,NM_023067,uc003esw.2_5end | |||
|cluster_id=chr3:138665921..138665932,- | |||
|coexpression_cluster_id=C1920 | |||
|description=CAGE_peak_6_at_FOXL2_5end | |||
|id=chr3:138665921..138665932,- | |||
|ontology_enrichment_celltype=CL:0002620!3.75e-14!23;CL:0000077!4.99e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000346;1.22e-15;3!CL:1000428;1.22e-15;3!CL:0002601;2.32e-12;1!CL:0002537;4.15e-10;5!CL:0002559;9.27e-10;5!CL:0000134;1.13e-07;55!CL:0000048;2.74e-07;58!CL:0000317;8.28e-07;2!CL:1000448;8.28e-07;2!CL:0002308;8.28e-07;2!CL:0002140;8.28e-07;2!CL:1000487;8.28e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.53e-15,3;CL:1000428,1.53e-15,3;CL:0002601,2.75e-12,1;CL:0002537,4.16e-10,5;CL:0002559,1.06e-09,5;CL:1000487,6.07e-07,2;CL:0000317,6.42e-07,2;CL:1000448,6.42e-07,2;CL:0002308,6.42e-07,2;CL:0002140,6.42e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.50e-07!239;DOID:17!3.88e-07!5;DOID:450!3.88e-07!5;DOID:66!3.88e-07!5;DOID:423!3.88e-07!5;DOID:0080000!3.88e-07!5;DOID:11722!3.88e-07!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002097!1.97e-13!40;UBERON:0001737!4.58e-12!9;UBERON:0002199!3.67e-11!45;UBERON:0002416!3.67e-11!45;UBERON:0003102!2.68e-08!95;UBERON:0001557!6.44e-07!19;UBERON:0002067!8.49e-07!9;UBERON:0004016!8.49e-07!9;UBERON:0010083!8.49e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;6.10e-23;2!UBERON:0000412;1.22e-15;3!UBERON:0001992;1.22e-15;3!UBERON:0003296;5.70e-12;4!UBERON:0010133;5.70e-12;4!UBERON:0005631;9.37e-11;10!UBERON:0000158;9.37e-11;10!UBERON:0002073;9.27e-10;5!UBERON:0000305;1.84e-07;7!UBERON:0001894;3.24e-07;7!UBERON:0001003;3.62e-07;15!UBERON:0007376;3.62e-07;15!UBERON:0002419;8.28e-07;2!UBERON:0007771;8.28e-07;2!UBERON:0003297;8.28e-07;2!UBERON:0001821;8.28e-07;2!UBERON:0003487;8.28e-07;2!UBERON:0001820;8.28e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,4.89e-23,2;UBERON:0000412,1.53e-15,3;UBERON:0001992,1.53e-15,3;UBERON:0003296,5.10e-12,4;UBERON:0010133,5.10e-12,4;UBERON:0002073,1.06e-09,5;UBERON:0005086,1.06e-09,5;UBERON:0005631,8.62e-08,14;UBERON:0000158,8.62e-08,14;UBERON:0000305,1.84e-07,7;UBERON:0001894,3.05e-07,7;UBERON:0006222,3.05e-07,7;UBERON:0001003,3.50e-07,15;UBERON:0007376,3.50e-07,15;UBERON:0007383,3.50e-07,15;UBERON:0002419,6.42e-07,2;UBERON:0007771,6.42e-07,2;UBERON:0003297,6.42e-07,2;UBERON:0001821,6.42e-07,2;UBERON:0003487,6.42e-07,2;UBERON:0001820,6.42e-07,2;UBERON:0005089,6.42e-07,2;UBERON:0005088,6.42e-07,2 | |||
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| ||
|short_description=p6@FOXL2 | |||
}} | }} |
Latest revision as of 01:29, 25 September 2015
Short description: | p6@FOXL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FOXL2_5end |
Coexpression cluster: | C1920_ovary_granulosa_chorionic_Mesenchymal_Fibroblast_tubular_leiomyoma |
Association with transcript: | 49bp_to_ENST00000330315, NM_023067, uc003esw.2_5end |
EntrezGene: | FOXL2 |
HGNC: | 1092 |
UniProt: | P58012Q53ZD3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.53e-15 | 3 |
stem cell of epidermis | 1.53e-15 | 3 |
uterine smooth muscle cell | 2.75e-12 | 1 |
amnion mesenchymal stem cell | 4.16e-10 | 5 |
hair follicle cell | 1.06e-09 | 5 |
smooth muscle cell of prostate | 6.07e-07 | 2 |
sebum secreting cell | 6.42e-07 | 2 |
epithelial cell of sweat gland | 6.42e-07 | 2 |
epithelial cell of skin gland | 6.42e-07 | 2 |
acinar cell of sebaceous gland | 6.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 4.89e-23 | 2 |
dermal papilla | 1.53e-15 | 3 |
papillary layer of dermis | 1.53e-15 | 3 |
gland of diencephalon | 5.10e-12 | 4 |
neuroendocrine gland | 5.10e-12 | 4 |
hair follicle | 1.06e-09 | 5 |
hair follicle placode | 1.06e-09 | 5 |
extraembryonic membrane | 8.62e-08 | 14 |
membranous layer | 8.62e-08 | 14 |
amnion | 1.84e-07 | 7 |
diencephalon | 3.05e-07 | 7 |
future diencephalon | 3.05e-07 | 7 |
skin epidermis | 3.50e-07 | 15 |
outer epithelium | 3.50e-07 | 15 |
enveloping layer of ectoderm | 3.50e-07 | 15 |
skin gland | 6.42e-07 | 2 |
epidermis gland | 6.42e-07 | 2 |
gland of integumental system | 6.42e-07 | 2 |
sebaceous gland | 6.42e-07 | 2 |
skin sebaceous gland | 6.42e-07 | 2 |
sweat gland | 6.42e-07 | 2 |
sweat gland placode | 6.42e-07 | 2 |
sebaceous gland placode | 6.42e-07 | 2 |