FFCP PHASE1:Hg19::chr3:147128048..147128057,+: Difference between revisions
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|id=chr3:147128048..147128057,+
|short_description=p4@AB464362
|description=CAGE_peak_4_at_AB464362_5end
|association_with_transcript=148bp_to_AB464362_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=148bp_to_AB464362_5end | |||
|cluster_id=chr3:147128048..147128057,+ | |||
|coexpression_cluster_id=C368 | |||
|description=CAGE_peak_4_at_AB464362_5end | |||
|id=chr3:147128048..147128057,+ | |||
|ontology_enrichment_celltype=CL:0000064!1.43e-17!3;CL:0005012!1.43e-17!3;CL:0000067!1.43e-17!3;CL:0002304!1.43e-17!3;CL:0000708!1.89e-17!3;CL:0002590!2.64e-17!3;CL:0002603!4.34e-17!3;CL:0002575!8.15e-13!2;CL:0000346!1.05e-08!3;CL:1000428!1.05e-08!3;CL:0000128!1.34e-07!7;CL:0000126!1.34e-07!7;CL:0000127!1.34e-07!7;CL:0002453!1.34e-07!7;CL:0000133!2.88e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002575;1.13e-57;2!CL:0000346;2.64e-38;3!CL:1000428;2.64e-38;3!CL:0000669;1.78e-29;4!CL:0002559;1.81e-23;5!CL:0002549;2.05e-15;2!CL:0002590;9.90e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,1.13e-57,2;CL:0000346,2.64e-38,3;CL:1000428,2.64e-38,3;CL:0000669,1.78e-29,4;CL:0002559,1.81e-23,5;CL:0002549,1.54e-15,2;CL:0002590,9.90e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.90e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002200!3.11e-24!11;UBERON:0006876!3.11e-24!11;UBERON:0005284!2.91e-18!5;UBERON:0001778!1.43e-17!3;UBERON:0001775!1.43e-17!3;UBERON:0003210!1.89e-17!3;UBERON:0003076!7.62e-17!15;UBERON:0003057!7.62e-17!15;UBERON:0004733!9.80e-16!12;UBERON:0002028!9.80e-16!12;UBERON:0007277!9.80e-16!12;UBERON:0002037!4.85e-15!6;UBERON:0006215!4.85e-15!6;UBERON:0001017!7.14e-15!82;UBERON:0002616!9.56e-15!59;UBERON:0004732!1.75e-14!13;UBERON:0000073!4.82e-14!94;UBERON:0001016!4.82e-14!94;UBERON:0005743!4.95e-14!86;UBERON:0000488!2.61e-13!4;UBERON:0004121!4.22e-13!169;UBERON:0000924!1.10e-12!173;UBERON:0006601!1.10e-12!173;UBERON:0003075!1.89e-12!86;UBERON:0007284!1.89e-12!86;UBERON:0000955!5.15e-12!69;UBERON:0006238!5.15e-12!69;UBERON:0002346!9.36e-12!90;UBERON:0000033!1.44e-11!123;UBERON:0000153!7.47e-11!129;UBERON:0007811!7.47e-11!129;UBERON:0002680!4.57e-10!9;UBERON:0001895!4.57e-10!9;UBERON:0010092!4.57e-10!9;UBERON:0001049!4.34e-09!57;UBERON:0005068!4.34e-09!57;UBERON:0006241!4.34e-09!57;UBERON:0007135!4.34e-09!57;UBERON:0002203!5.00e-09!6;UBERON:0001768!5.00e-09!6;UBERON:0000412!1.05e-08!3;UBERON:0001992!1.05e-08!3;UBERON:0007625!2.20e-08!11;UBERON:0001896!8.33e-08!3;UBERON:0005290!8.33e-08!3;UBERON:0010096!8.33e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;2.64e-38;3!UBERON:0001992;2.64e-38;3!UBERON:0002073;1.81e-23;5!UBERON:0005284;1.81e-23;5!UBERON:0005629;2.05e-15;2!UBERON:0005358;2.05e-15;2!UBERON:0001886;2.05e-15;2!UBERON:0004086;2.05e-15;2!UBERON:0005282;2.05e-15;2!UBERON:0005281;2.05e-15;2!UBERON:0002067;1.58e-13;9!UBERON:0006876;2.98e-11;11!UBERON:0001003;1.65e-08;15!UBERON:0007376;1.65e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,2.64e-38,3;UBERON:0001992,2.64e-38,3;UBERON:0005284,1.44e-23,5;UBERON:0002073,1.81e-23,5;UBERON:0005086,1.81e-23,5;UBERON:0005629,1.54e-15,2;UBERON:0005358,1.54e-15,2;UBERON:0001886,1.54e-15,2;UBERON:0004086,1.54e-15,2;UBERON:0005282,1.54e-15,2;UBERON:0005281,1.54e-15,2;UBERON:0002067,1.58e-13,9;UBERON:0004016,1.58e-13,9;UBERON:0010083,1.58e-13,9;UBERON:0006876,2.68e-11,11;UBERON:0001003,1.65e-08,15;UBERON:0007376,1.65e-08,15;UBERON:0007383,1.65e-08,15 | |||
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|short_description=p4@AB464362 | |||
}} | }} |
Latest revision as of 16:45, 29 July 2015
Short description: | p4@AB464362 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AB464362_5end |
Coexpression cluster: | C368_Pericytes_Fibroblast_Nucleus_Anulus_Meningeal_Mesenchymal_Smooth |
Association with transcript: | 148bp_to_AB464362_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 1.13e-57 | 2 |
hair follicle dermal papilla cell | 2.64e-38 | 3 |
stem cell of epidermis | 2.64e-38 | 3 |
pericyte cell | 1.78e-29 | 4 |
hair follicle cell | 1.81e-23 | 5 |
fibroblast of choroid plexus | 1.54e-15 | 2 |
smooth muscle cell of the brain vasculature | 9.90e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 2.64e-38 | 3 |
papillary layer of dermis | 2.64e-38 | 3 |
brain vasculature | 1.44e-23 | 5 |
hair follicle | 1.81e-23 | 5 |
hair follicle placode | 1.81e-23 | 5 |
vascular plexus | 1.54e-15 | 2 |
ventricle of nervous system | 1.54e-15 | 2 |
choroid plexus | 1.54e-15 | 2 |
brain ventricle | 1.54e-15 | 2 |
ventricular system of brain | 1.54e-15 | 2 |
ventricular system of central nervous system | 1.54e-15 | 2 |
dermis | 1.58e-13 | 9 |
dermatome | 1.58e-13 | 9 |
future dermis | 1.58e-13 | 9 |
vasculature of organ | 2.68e-11 | 11 |
skin epidermis | 1.65e-08 | 15 |
outer epithelium | 1.65e-08 | 15 |
enveloping layer of ectoderm | 1.65e-08 | 15 |