FFCP PHASE1:Hg19::chr3:174976751..174976760,-: Difference between revisions
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|id=chr3:174976751..174976760,-
|short_description=p@chr3:174976751..174976760,-
|description=CAGE_peak_at_chr3:174976751..174976760,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:174976751..174976760,- | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_at_chr3:174976751..174976760,- | |||
|id=chr3:174976751..174976760,- | |||
|ontology_enrichment_celltype=CL:0000945!3.90e-41!24;CL:0000826!3.90e-41!24;CL:0000785!5.25e-26!2;CL:0000955!5.25e-26!2;CL:0000818!5.25e-26!2;CL:0000954!5.25e-26!2;CL:0000816!5.25e-26!2;CL:0000542!2.13e-22!53;CL:0000051!2.13e-22!53;CL:0000838!1.66e-18!52;CL:0000817!1.08e-17!3;CL:0000946!5.85e-14!1;CL:0000786!5.85e-14!1;CL:0000980!5.85e-14!1;CL:0000819!7.55e-14!1;CL:0002087!3.17e-09!119;CL:0000738!1.16e-07!140;CL:0002583!2.25e-07!2;CL:0002031!4.32e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.07e-42;24!CL:0000946;2.05e-29;1!CL:0000786;2.05e-29;1!CL:0000542;4.66e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.31e-42,24;CL:0000826,2.31e-42,24;CL:0000946,3.16e-29,1;CL:0000786,3.16e-29,1;CL:0000980,3.16e-29,1;CL:0000838,8.65e-20,52;CL:0000542,2.01e-19,53;CL:0000051,2.01e-19,53;CL:0000785,2.37e-15,2;CL:0000955,2.37e-15,2;CL:0000818,2.37e-15,2;CL:0000954,2.37e-15,2;CL:0000816,2.37e-15,2;CL:0000817,1.09e-10,3;CL:0002087,5.23e-09,115;CL:0002031,1.21e-08,120;CL:0000738,1.20e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000954;1.91e-15;2!CL:0000051;4.66e-09;53 | |||
|ontology_enrichment_disease=DOID:0060058!2.96e-20!10;DOID:0060073!7.55e-14!1;DOID:8675!7.55e-14!1;DOID:12603!9.73e-14!1;DOID:630!1.25e-13!1;DOID:0050177!1.25e-13!1;DOID:0050427!1.25e-13!1;DOID:2355!2.07e-13!1;DOID:3910!1.99e-07!2;DOID:74!2.40e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.66e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.37e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0004903!1.99e-07!2;UBERON:0002173!1.99e-07!2;UBERON:0002186!1.99e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;9.43e-11;3!UBERON:0004177;5.86e-07;5!UBERON:0005057;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.17e-11,3;UBERON:0004854,8.17e-11,3;UBERON:0009034,8.17e-11,3;UBERON:0002095,8.17e-11,3;UBERON:0004782,8.17e-11,3;UBERON:0003281,8.17e-11,3;UBERON:0009664,8.17e-11,3;UBERON:0002296,8.17e-11,3;UBERON:0005602,8.17e-11,3;UBERON:0001179,8.17e-11,3;UBERON:0006293,8.17e-11,3 | |||
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|short_description=p@chr3:174976751..174976760,- | |||
}} | }} |
Latest revision as of 18:23, 29 July 2015
Short description: | p@chr3:174976751..174976760, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:174976751..174976760, - |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.31e-42 | 24 |
pro-B cell | 2.31e-42 | 24 |
antibody secreting cell | 3.16e-29 | 1 |
plasma cell | 3.16e-29 | 1 |
plasmablast | 3.16e-29 | 1 |
lymphoid lineage restricted progenitor cell | 8.65e-20 | 52 |
lymphocyte | 2.01e-19 | 53 |
common lymphoid progenitor | 2.01e-19 | 53 |
mature B cell | 2.37e-15 | 2 |
pre-B-II cell | 2.37e-15 | 2 |
transitional stage B cell | 2.37e-15 | 2 |
small pre-B-II cell | 2.37e-15 | 2 |
immature B cell | 2.37e-15 | 2 |
precursor B cell | 1.09e-10 | 3 |
nongranular leukocyte | 5.23e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.21e-08 | 120 |
leukocyte | 1.20e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
spleen | 8.17e-11 | 3 |
gastrointestinal system mesentery | 8.17e-11 | 3 |
stomach region | 8.17e-11 | 3 |
mesentery | 8.17e-11 | 3 |
gastrointestinal system serosa | 8.17e-11 | 3 |
mesentery of stomach | 8.17e-11 | 3 |
gut mesentery | 8.17e-11 | 3 |
dorsal mesentery | 8.17e-11 | 3 |
dorsal mesogastrium | 8.17e-11 | 3 |
peritoneal cavity | 8.17e-11 | 3 |
spleen primordium | 8.17e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.37e-12 | 10 |