FFCP PHASE1:Hg19::chr3:186857217..186857265,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:186857217..186857265,-
|short_description=p2@RPL39L
|description=CAGE_peak_2_at_RPL39L_5end
|association_with_transcript=0bp_to_NM_052969,uc003fre.1,uc003f...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=116832 | |EntrezGene=116832 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17094 | |HGNC=17094 | ||
|TSSclassifier=strong | |||
|UniProt=Q96EH5 | |UniProt=Q96EH5 | ||
|association_with_transcript=0bp_to_NM_052969,uc003fre.1,uc003frf.1_5end | |||
|cluster_id=chr3:186857217..186857265,- | |||
|description=CAGE_peak_2_at_RPL39L_5end | |||
|id=chr3:186857217..186857265,- | |||
|ontology_enrichment_celltype=CL:0000066!7.91e-15!254;CL:0002321!8.77e-13!248;CL:0000220!3.09e-12!246;CL:0000222!3.53e-09!119;CL:0000548!7.94e-09!679;CL:0000004!7.94e-09!679;CL:0000255!7.94e-09!679;CL:0000012!8.55e-09!682;CL:0000076!5.81e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.72e-07;15!CL:1000497;5.02e-07;17!CL:0002518;5.02e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.49e-17,253;CL:0002321,1.16e-13,250;CL:0000222,3.09e-09,121;CL:1000449,2.17e-07,15;CL:0000076,2.94e-07,63;CL:1000497,6.20e-07,17;CL:0002518,6.20e-07,17;CL:0002078,6.80e-07,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.48e-07!235;DOID:14566!2.06e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.49e-10,235;DOID:14566,9.89e-10,239;DOID:0050687,2.92e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000072!4.42e-07!46;UBERON:0003104!8.32e-07!238;UBERON:0009142!8.32e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0001851;5.43e-08;15!UBERON:0006555;1.72e-07;15!UBERON:0004819;1.72e-07;15!UBERON:0001285;1.72e-07;15!UBERON:0007684;1.72e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001851,6.53e-08,15;UBERON:0004211,2.17e-07,15;UBERON:0009773,2.17e-07,15;UBERON:0001231,2.17e-07,15;UBERON:0001285,2.17e-07,15;UBERON:0007684,2.17e-07,15;UBERON:0004208,2.17e-07,15 | |||
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| ||
|short_description=p2@RPL39L | |||
}} | }} |
Latest revision as of 06:26, 17 September 2015
Short description: | p2@RPL39L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPL39L_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_052969, uc003fre.1, uc003frf.1_5end |
EntrezGene: | RPL39L |
HGNC: | 17094 |
UniProt: | Q96EH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.49e-17 | 253 |
embryonic cell | 1.16e-13 | 250 |
mesodermal cell | 3.09e-09 | 121 |
epithelial cell of nephron | 2.17e-07 | 15 |
squamous epithelial cell | 2.94e-07 | 63 |
kidney cell | 6.20e-07 | 17 |
kidney epithelial cell | 6.20e-07 | 17 |
meso-epithelial cell | 6.80e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
cortex | 6.53e-08 | 15 |
nephron epithelium | 2.17e-07 | 15 |
renal tubule | 2.17e-07 | 15 |
nephron tubule | 2.17e-07 | 15 |
nephron | 2.17e-07 | 15 |
uriniferous tubule | 2.17e-07 | 15 |
nephrogenic mesenchyme | 2.17e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.49e-10 | 235 |
disease of cellular proliferation | 9.89e-10 | 239 |
cell type cancer | 2.92e-07 | 143 |