FFCP PHASE1:Hg19::chr1:207206095..207206121,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79098 | |EntrezGene=79098 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28667 | |HGNC=28667 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BW04 | |UniProt=Q9BW04 | ||
|association_with_transcript=0bp_to_ENST00000461135,NM_001083924,NM_023938,uc001hfd.2,uc009xcb.1_5end | |association_with_transcript=0bp_to_ENST00000461135,NM_001083924,NM_023938,uc001hfd.2,uc009xcb.1_5end | ||
|cluster_id=chr1:207206095..207206121,- | |||
|coexpression_cluster_id=C1844 | |coexpression_cluster_id=C1844 | ||
|description=CAGE_peak_2_at_C1orf116_5end | |description=CAGE_peak_2_at_C1orf116_5end |
Latest revision as of 06:58, 20 September 2015
Short description: | p2@C1orf116 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C1orf116_5end |
Coexpression cluster: | C1844_squamous_epidermoid_bronchioalveolar_Corneal_Alveolar_Esophageal_Urothelial |
Association with transcript: | 0bp_to_ENST00000461135, NM_001083924, NM_023938, uc001hfd.2, uc009xcb.1_5end |
EntrezGene: | C1orf116 |
HGNC: | 28667 |
UniProt: | Q9BW04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@C1orf116 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.72e-32 | 42 |
epithelial cell | 1.46e-30 | 253 |
endodermal cell | 6.60e-23 | 58 |
respiratory epithelial cell | 3.25e-16 | 13 |
epithelial cell of alimentary canal | 3.52e-15 | 20 |
epithelial cell of tracheobronchial tree | 5.24e-11 | 9 |
epithelial cell of lower respiratory tract | 5.24e-11 | 9 |
kidney tubule cell | 6.04e-10 | 10 |
nephron tubule epithelial cell | 6.04e-10 | 10 |
general ecto-epithelial cell | 8.16e-10 | 14 |
Showing 1 to 10 of 16 entries
Ontology term | p-value | n |
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endoderm-derived structure | 3.05e-29 | 160 |
endoderm | 3.05e-29 | 160 |
presumptive endoderm | 3.05e-29 | 160 |
digestive system | 2.09e-23 | 145 |
digestive tract | 2.09e-23 | 145 |
primitive gut | 2.09e-23 | 145 |
subdivision of digestive tract | 6.52e-19 | 118 |
respiratory system | 9.74e-19 | 74 |
orifice | 1.22e-17 | 36 |
epithelial bud | 1.07e-14 | 37 |
Showing 1 to 10 of 56 entries
Ontology term | p-value | n |
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squamous cell carcinoma | 1.75e-15 | 14 |
carcinoma | 9.11e-11 | 106 |
Showing 1 to 2 of 2 entries