FFCP PHASE1:Hg19::chr4:187647702..187647734,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:187647702..187647734,-
|short_description=p4@FAT1
|description=CAGE_peak_4_at_FAT1_5end
|association_with_transcript=115bp_to_uc010iso.1_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2195 | |EntrezGene=2195 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3595 | |HGNC=3595 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=115bp_to_uc010iso.1_5end | |||
|cluster_id=chr4:187647702..187647734,- | |||
|coexpression_cluster_id=C4400 | |||
|description=CAGE_peak_4_at_FAT1_5end | |||
|id=chr4:187647702..187647734,- | |||
|ontology_enrichment_celltype=CL:0002076!1.89e-10!43;CL:0002368!3.97e-08!13;CL:0000223!9.19e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.26e-13;42!CL:0002251;1.28e-11;20!CL:0002368;1.48e-11;13!CL:0000622;1.88e-09;5!CL:0002159;2.07e-08;14!CL:0000154;9.56e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.57e-17,42;CL:0002251,6.23e-12,20;CL:0002368,1.49e-11,13;CL:0000223,1.83e-10,58;CL:0000622,1.92e-09,5;CL:0002159,3.03e-08,14;CL:0000154,9.71e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!9.27e-16!365;UBERON:0003102!9.79e-16!95;UBERON:0002097!3.50e-09!40;UBERON:0002199!5.50e-08!45;UBERON:0002416!5.50e-08!45;UBERON:0000161!1.25e-07!35;UBERON:0000165!2.32e-07!28;UBERON:0000930!2.32e-07!28;UBERON:0000481!2.37e-07!347;UBERON:0000153!5.99e-07!129;UBERON:0007811!5.99e-07!129;UBERON:0000033!6.77e-07!123;UBERON:0000468!8.11e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0000161;3.02e-12;19!UBERON:0000166;3.02e-12;19!UBERON:0000165;3.83e-11;28!UBERON:0002097;8.37e-11;41!UBERON:0001044;7.71e-10;6!UBERON:0003293;7.71e-10;6!UBERON:0003294;7.71e-10;6!UBERON:0010047;7.71e-10;6!UBERON:0003408;7.71e-10;6!UBERON:0000167;7.71e-10;6!UBERON:0002199;5.30e-09;46!UBERON:0002416;5.30e-09;46!UBERON:0001708;1.23e-07;4!UBERON:0008895;1.23e-07;4!UBERON:0003102;5.69e-07;50!UBERON:0001003;7.18e-07;15!UBERON:0007376;7.18e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.17e-23,99;UBERON:0000166,1.16e-13,22;UBERON:0002097,6.01e-13,41;UBERON:0000165,4.41e-12,29;UBERON:0000930,4.41e-12,29;UBERON:0000161,2.39e-11,36;UBERON:0002199,7.66e-11,46;UBERON:0002416,7.66e-11,46;UBERON:0001004,2.31e-10,74;UBERON:0001044,7.11e-10,6;UBERON:0003293,7.11e-10,6;UBERON:0003294,7.11e-10,6;UBERON:0010047,7.11e-10,6;UBERON:0000167,7.11e-10,6;UBERON:0000033,8.56e-09,56;UBERON:0004119,4.62e-08,160;UBERON:0000925,4.62e-08,160;UBERON:0006595,4.62e-08,160;UBERON:0001708,1.21e-07,4;UBERON:0008895,1.21e-07,4;UBERON:0000153,2.34e-07,62;UBERON:0007811,2.34e-07,62;UBERON:0001003,6.20e-07,15;UBERON:0007376,6.20e-07,15;UBERON:0007383,6.20e-07,15;UBERON:0010188,6.25e-07,6;UBERON:0002539,6.25e-07,6;UBERON:0008816,6.25e-07,6 | |||
|phase1_expression=0.908391896352783,1.71280419112787,0.281908808191942,2.00146596706261,0.446961094427288,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0,0.662794751455832,1.34465029290355,1.20538905604795,2.19093027116212,0.487932798790507,0.123121058076788,0,1.25381888591235,0,0,0.251085279189606,0,0.0821005894499457,0,0,0,0,5.51652734687356,4.51808878167375,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,1.00267582127178,0.579386075843295,2.3858578411533,0.973269740605272,0.283604451492204,0.886917589850256,0.43917392846563,0.523916301990851,0.728590576585084,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.66944122552934,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0.993943903390637,0.12663051166458,1.05927344650575,0.286836620748814,0,0,2.1349799145941,0.24666754841716,0,0.404132016209064,0.326923806226917,0.151357427644931,0,0,0,0.570471821544449,0.149448680551801,0.23486899728753,0.161872944368132,0.140450806702248,0,0,0.206651562351531,0,1.48360157567134,0,0,0,0.125118519871964,0.277064115484183,0.877955241761676,0.919463387397059,1.20190447125277,0.226864366320042,4.66413052791041,1.2813443329114,0.423863802319124,3.90118424909723,0.515262646192195,5.41045134095821,1.30281799432113,3.71307930930786,1.55899208257918,2.01947019395292,0.644349290496095,0,10.6502877754984,2.21654616100809,0.847802961552438,9.08326009867495,13.6373060295417,17.2082757233402,0,0,0,0.10366105501537,0,0,1.56449532329816,1.28648187638577,1.38134921352481,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,9.98727597218493,1.1240175325762,4.92591964816991,2.22212268380471,0,0,0,0.231860809950154,1.05667824812239,0,0,0,0,0,0,0,0,7.49870671894216,6.88726725615324,8.22295564005842,4.11969204433102,3.48760726216754,4.21720947081732,1.47798971368783,0.088048434013226,0,0.144119953416961,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.714889968290738,0,0,0,0,0,0.301439377059586,1.74306691720059,1.09970290300263,0,0,0,0.958499421966331,2.29723871668228,1.42636905040718,1.15825045334063,0.821905290201534,1.25342674267927,0,0,0,0,1.27047312111232,0,0,0,0,0,0,0,0.12269149171914,0,0,1.24782516918484,0.892144943985809,0.473107245101804,1.28855556491985,0.601892199455438,0,1.03473071292505,0,0.184369168541703,0.260650843404249,0,0,0,0,0,0.303127571446259,0,0,0.744323423456331,7.21271274453894,3.08726103876381,0.640695746278505,1.53512174720011,1.12597744800525,0,0.308419387605311,0.532685175939381,0.0821271560138091,0.519254429183621,0.929683027679674,0,15.2384917430496,0.828728900423067,0.229628896329213,0,1.44236856455367,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0.325378394664303,0.309123034943167,1.46511143709349,1.65018999841176,8.03971753194641,4.55042172225565,0,0.290012154876366,0,0,0.137836572484531,0,0,0.0852266274161009,0.356128142586949,4.95854746082934,6.91884242514382,11.7403695495017,2.6301023022443,0,1.25924938732256,0.6970372701606,0.308033580176089,0,0,0.55597265731176,0.143124886741991,0,0.949138274156178,0.762520775695299,0,0,0.95460974377781,0,0.539617372749944,1.37268514868027,1.29593642580255,0,3.17020642346017,0.421258456238981,0,0,1.05650146756755,0.272999822815972,1.55545975149084,1.13008116620243,0.551365343546124,0,0.438450885253763,0,0,0.811641507850816,0.30982349809975,0.281695602532241,0,0.0982490410131212,0.7133421029625,0,0.633322905892992,0.658589785919804,0,0,3.65644028356946,2.01090682660736,3.26672954583968,0.188287601553558,0.43050537267123,0,1.7737206141467,1.1486170010348,0,0,0,0,0,0,0,0,0,0,4.90080431962063,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0.1605880751037,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0.293016358543788,0,0,0.284136146806413,0.95497793895076,0.296964680832639,0,0,0.140669416410513,1.11308705022906,0,0,0.597743964753209,0,0,0.613612095012929,0,5.59871257791253,0.179736702294654,0.179021174675609,0,0.493217028184668,0,0,2.90799823828566,0.371072392647405,0,0.520855522170466,0,0,8.30692172484147,0.508507300585533,0,0,0,0,0,0.120596438625408,0,0.442317039724898,0,0.658156191461918,0,5.85579725970134,0.615602068030377,0.341826167541004,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0.421996129056054,0.326465616318295,0,0,0.995261931078505,0.265372693510018,0,0,0,0.104421949505455,0.202203398942031,0,0,0,0.391329237864179,0,1.57833761139756,0,0,0.31593289814244,0.150323419414493,0,0,0,0,0,0.569219092059585,0,0,4.01768829398948,0.870592065804026,2.62090002363045,0.687944129886466,0.19351266257817,0,0.0821154570532092,0.290967049465258,0,0.451961481561065,0,0.19871461170299,0.50648636764703,0,0.0801588202515337,0.85381197895741,1.59847687665704,0.288180834308212,0.458146384663663,0,0,0,0.942776138467182,0.543616824294456,0.104602846312333,0.20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| ||
|short_description=p4@FAT1 | |||
}} | }} |
Latest revision as of 05:31, 17 September 2015
Short description: | p4@FAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAT1_5end |
Coexpression cluster: | C4400_Fibroblast_Preadipocyte_mesodermal_Small_Keratinocyte_Gingival_basal |
Association with transcript: | 115bp_to_uc010iso.1_5end |
EntrezGene: | FAT1 |
HGNC: | 3595 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.57e-17 | 42 |
epithelial cell of alimentary canal | 6.23e-12 | 20 |
respiratory epithelial cell | 1.49e-11 | 13 |
endodermal cell | 1.83e-10 | 58 |
acinar cell | 1.92e-09 | 5 |
general ecto-epithelial cell | 3.03e-08 | 14 |
protein secreting cell | 9.71e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
surface structure | 2.17e-23 | 99 |
oral opening | 1.16e-13 | 22 |
skin of body | 6.01e-13 | 41 |
mouth | 4.41e-12 | 29 |
stomodeum | 4.41e-12 | 29 |
orifice | 2.39e-11 | 36 |
integument | 7.66e-11 | 46 |
integumental system | 7.66e-11 | 46 |
respiratory system | 2.31e-10 | 74 |
saliva-secreting gland | 7.11e-10 | 6 |
gland of oral region | 7.11e-10 | 6 |
gland of foregut | 7.11e-10 | 6 |
oral gland | 7.11e-10 | 6 |
oral cavity | 7.11e-10 | 6 |
head | 8.56e-09 | 56 |
endoderm-derived structure | 4.62e-08 | 160 |
endoderm | 4.62e-08 | 160 |
presumptive endoderm | 4.62e-08 | 160 |
jaw skeleton | 1.21e-07 | 4 |
splanchnocranium | 1.21e-07 | 4 |
anterior region of body | 2.34e-07 | 62 |
craniocervical region | 2.34e-07 | 62 |
skin epidermis | 6.20e-07 | 15 |
outer epithelium | 6.20e-07 | 15 |
enveloping layer of ectoderm | 6.20e-07 | 15 |
protuberance | 6.25e-07 | 6 |
pharyngeal arch | 6.25e-07 | 6 |
embryonic head | 6.25e-07 | 6 |