FFCP PHASE1:Hg19::chr5:142783987..142783998,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:142783987..142783998,-
|short_description=p29@NR3C1
|description=CAGE_peak_29_at_NR3C1_5end
|association_with_transcript=36bp_to_ENST00000416954_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2908 | |EntrezGene=2908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7978 | |HGNC=7978 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z7I2 | |UniProt=B7Z7I2 | ||
|association_with_transcript=36bp_to_ENST00000416954_5end | |||
|cluster_id=chr5:142783987..142783998,- | |||
|description=CAGE_peak_29_at_NR3C1_5end | |||
|id=chr5:142783987..142783998,- | |||
|ontology_enrichment_celltype=CL:0000738!1.00e-12!140;CL:0002087!4.20e-12!119;CL:0002031!2.46e-11!124;CL:0000766!1.20e-09!76;CL:0000037!1.92e-09!172;CL:0000566!1.92e-09!172;CL:0000988!2.93e-09!182;CL:0000219!5.05e-09!390;CL:0002194!5.88e-09!63;CL:0000576!5.88e-09!63;CL:0000040!5.88e-09!63;CL:0000559!5.88e-09!63;CL:0000134!6.85e-09!358;CL:0000557!9.47e-09!71;CL:0000860!1.21e-08!45;CL:0002009!2.21e-08!65;CL:0002032!2.36e-08!165;CL:0000837!2.36e-08!165;CL:0002057!3.05e-08!42;CL:0000839!3.65e-08!70;CL:0002320!3.70e-08!365 | |||
|ontology_enrichment_celltype_v019=CL:0000784;2.38e-27;3!CL:0002032;3.81e-21;1!CL:0000557;3.81e-21;1!CL:0000451;3.49e-08;10!CL:0000775;6.13e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.72e-27,3;CL:0000451,3.63e-08,10;CL:0000775,6.78e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.85e-09!102;UBERON:0003061!1.85e-09!102;UBERON:0002371!2.15e-09!80;UBERON:0001474!1.08e-08!86;UBERON:0002384!2.78e-08!375;UBERON:0002405!1.01e-07!115;UBERON:0002193!1.92e-07!112;UBERON:0004765!7.61e-07!101;UBERON:0001434!7.61e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p29@NR3C1 | |||
}} | }} |
Latest revision as of 07:42, 25 September 2015
Short description: | p29@NR3C1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_NR3C1_5end |
Coexpression cluster: | NA |
Association with transcript: | 36bp_to_ENST00000416954_5end |
EntrezGene: | NR3C1 |
HGNC: | 7978 |
UniProt: | B7Z7I2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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plasmacytoid dendritic cell | 2.72e-27 | 3 |
dendritic cell | 3.63e-08 | 10 |
neutrophil | 6.78e-08 | 3 |