FFCP PHASE1:Hg19::chr5:147470546..147470574,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:147470546..147470574,+
|short_description=p3@SPINK5
|description=CAGE_peak_3_at_SPINK5_5end
|association_with_transcript=55bp_to_ENST00000476608_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11005 | |EntrezGene=11005 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15464 | |HGNC=15464 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=55bp_to_ENST00000476608_5end | |||
|cluster_id=chr5:147470546..147470574,+ | |||
|coexpression_cluster_id=C2811 | |||
|description=CAGE_peak_3_at_SPINK5_5end | |||
|id=chr5:147470546..147470574,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.69e-22!43;CL:0000066!1.51e-19!254;CL:0000223!3.89e-18!59;CL:0002251!5.55e-17!21;CL:0002150!2.77e-09!3;CL:0000861!2.77e-09!3;CL:0002368!4.56e-09!13;CL:0000622!9.38e-09!5;CL:0002623!1.40e-08!3;CL:0002621!7.25e-08!3;CL:0000154!2.79e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0001014;2.66e-16;2!CL:0001016;2.66e-16;2!CL:0000622;1.67e-14;5!CL:0000154;3.53e-12;6!CL:0000240;6.99e-12;6!CL:0000311;6.99e-12;6!CL:0000079;6.99e-12;6!CL:0000237;6.99e-12;6!CL:0002623;1.84e-11;3!CL:0002336;4.91e-09;1!CL:0002261;4.91e-09;1!CL:0002170;4.91e-09;1!CL:0000150;2.76e-08;9!CL:0000362;5.14e-08;9!CL:0000453;4.78e-07;5!CL:0000312;6.97e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,4.08e-16,2;CL:0001016,4.08e-16,2;CL:0000622,1.83e-14,5;CL:0000154,3.81e-12,6;CL:0000240,5.37e-12,6;CL:0000311,5.37e-12,6;CL:0000079,5.37e-12,6;CL:0000237,5.37e-12,6;CL:0000036,5.37e-12,6;CL:0000357,5.37e-12,6;CL:0000114,5.37e-12,6;CL:0002623,1.94e-11,3;CL:0002336,4.19e-09,1;CL:0002261,4.19e-09,1;CL:0002170,4.19e-09,1;CL:0000150,2.91e-08,9;CL:0000362,4.66e-08,9;CL:0000453,5.64e-07,5;CL:0000312,6.00e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000357;6.99e-12;6!CL:0000114;6.99e-12;6!UBERON:0009143;2.31e-09;1 | |||
|ontology_enrichment_disease=DOID:305!9.83e-11!106;DOID:1749!5.10e-08!14;DOID:0050687!5.94e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:4362;1.98e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.98e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.37e-13!169;UBERON:0000925!1.37e-13!169;UBERON:0006595!1.37e-13!169;UBERON:0000166!2.12e-12!21;UBERON:0001004!2.96e-12!72;UBERON:0000161!1.09e-10!35;UBERON:0000165!1.52e-10!28;UBERON:0000930!1.52e-10!28;UBERON:0001007!5.20e-10!155;UBERON:0001555!5.20e-10!155;UBERON:0007026!5.20e-10!155;UBERON:0000344!4.23e-09!12;UBERON:0002110!5.15e-08!3;UBERON:0006242!5.15e-08!3;UBERON:0001949!7.25e-08!3;UBERON:0000065!4.66e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;4.91e-09;1!UBERON:0001961;4.91e-09;1!UBERON:0001744;4.91e-09;1!UBERON:0001042;4.91e-09;1!UBERON:0001735;4.91e-09;1!UBERON:0001003;3.72e-08;15!UBERON:0007376;3.72e-08;15!UBERON:0000165;8.18e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,4.91e-09,1;UBERON:0001961,4.91e-09,1;UBERON:0001744,4.91e-09,1;UBERON:0001735,4.91e-09,1;UBERON:0001003,3.58e-08,15;UBERON:0007376,3.58e-08,15;UBERON:0007383,3.58e-08,15 | |||
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| ||
|short_description=p3@SPINK5 | |||
}} | }} |
Latest revision as of 23:20, 15 September 2015
Short description: | p3@SPINK5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPINK5_5end |
Coexpression cluster: | C2811_cervical_epitheloid_ductal_tongue_esophagus_immature_salivary |
Association with transcript: | 55bp_to_ENST00000476608_5end |
EntrezGene: | SPINK5 |
HGNC: | 15464 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 4.08e-16 | 2 |
immature CD1a-positive Langerhans cell | 4.08e-16 | 2 |
acinar cell | 1.83e-14 | 5 |
protein secreting cell | 3.81e-12 | 6 |
stratified squamous epithelial cell | 5.37e-12 | 6 |
keratin accumulating cell | 5.37e-12 | 6 |
stratified epithelial cell | 5.37e-12 | 6 |
keratinizing barrier epithelial cell | 5.37e-12 | 6 |
epithelial fate stem cell | 5.37e-12 | 6 |
stratified epithelial stem cell | 5.37e-12 | 6 |
surface ectodermal cell | 5.37e-12 | 6 |
acinar cell of salivary gland | 1.94e-11 | 3 |
buccal mucosa cell | 4.19e-09 | 1 |
endothelial cell of viscerocranial mucosa | 4.19e-09 | 1 |
keratinized cell of the oral mucosa | 4.19e-09 | 1 |
glandular epithelial cell | 2.91e-08 | 9 |
epidermal cell | 4.66e-08 | 9 |
Langerhans cell | 5.64e-07 | 5 |
keratinocyte | 6.00e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
tonsil | 4.91e-09 | 1 |
mucosa-associated lymphoid tissue | 4.91e-09 | 1 |
lymphoid tissue | 4.91e-09 | 1 |
tonsillar ring | 4.91e-09 | 1 |
skin epidermis | 3.58e-08 | 15 |
outer epithelium | 3.58e-08 | 15 |
enveloping layer of ectoderm | 3.58e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.98e-07 | 5 |