FFCP PHASE1:Hg19::chr5:150951027..150951036,-: Difference between revisions
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|id=chr5:150951027..150951036,-
|short_description=p@chr5:150951027..150951036,-
|description=CAGE_peak_at_chr5:150951027..150951036,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:150951027..150951036,- | |||
|coexpression_cluster_id=C234 | |||
|description=CAGE_peak_at_chr5:150951027..150951036,- | |||
|id=chr5:150951027..150951036,- | |||
|ontology_enrichment_celltype=CL:0002076!5.11e-27!43;CL:0000223!1.13e-21!59;CL:0002251!2.06e-16!21;CL:0002368!1.08e-15!13;CL:0000066!1.29e-14!254;CL:0002328!8.74e-09!3;CL:0002621!8.74e-09!3;CL:0002166!1.81e-08!3;CL:0000076!2.07e-07!62;CL:1001319!3.40e-07!1;CL:1000600!3.40e-07!1;CL:0002159!4.89e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002251;2.29e-11;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,2.29e-11,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!4.62e-25!14;DOID:305!4.68e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.43e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.43e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0003343!3.43e-23!4;UBERON:0004785!3.43e-23!4;UBERON:0003729!1.34e-18!5;UBERON:0000974!4.50e-14!10;UBERON:0001004!8.24e-13!72;UBERON:0000344!7.61e-12!12;UBERON:0000166!2.20e-09!21;UBERON:0004815!8.74e-09!3;UBERON:0002031!8.74e-09!3;UBERON:0001949!8.74e-09!3;UBERON:0004119!2.94e-08!169;UBERON:0000925!2.94e-08!169;UBERON:0006595!2.94e-08!169;UBERON:0000998!1.98e-07!1;UBERON:0006868!1.98e-07!1;UBERON:0000065!2.58e-07!53;UBERON:0000161!3.07e-07!35;UBERON:0004645!3.40e-07!1;UBERON:0001256!3.40e-07!1;UBERON:0001259!3.40e-07!1;UBERON:0004807!6.50e-07!28;UBERON:0000165!6.79e-07!28;UBERON:0000930!6.79e-07!28;UBERON:0002185!8.70e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;3.10e-50;4!UBERON:0004785;3.10e-50;4!UBERON:0000974;4.27e-34;6!UBERON:0003729;1.21e-16;13!UBERON:0000161;6.95e-12;19!UBERON:0000166;6.95e-12;19!UBERON:0000344;2.29e-11;20!UBERON:0000165;1.52e-08;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,3.10e-50,4;UBERON:0004785,3.10e-50,4;UBERON:0000974,3.81e-21,10;UBERON:0003729,1.21e-16,13;UBERON:0000344,2.29e-11,20;UBERON:0000166,1.80e-10,22;UBERON:0000165,2.67e-08,29;UBERON:0000930,2.67e-08,29;UBERON:0000161,5.81e-07,36 | |||
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|short_description=p@chr5:150951027..150951036,- | |||
}} | }} |
Latest revision as of 11:55, 30 July 2015
Short description: | p@chr5:150951027..150951036, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:150951027..150951036, - |
Coexpression cluster: | C234_oral_epidermoid_malignant_cervical_ductal_lung_keratoacanthoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 2.29e-11 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 3.10e-50 | 4 |
respiratory system mucosa | 3.10e-50 | 4 |
neck | 3.81e-21 | 10 |
mouth mucosa | 1.21e-16 | 13 |
mucosa | 2.29e-11 | 20 |
oral opening | 1.80e-10 | 22 |
mouth | 2.67e-08 | 29 |
stomodeum | 2.67e-08 | 29 |
orifice | 5.81e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.43e-15 | 14 |