FFCP PHASE1:Hg19::chr5:180018513..180018530,-: Difference between revisions
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|id=chr5:180018513..180018530,-
|short_description=p2@SCGB3A1
|description=CAGE_peak_2_at_SCGB3A1_5end
|association_with_transcript=9bp_to_ENST00000292641_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=92304 | |EntrezGene=92304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18384 | |HGNC=18384 | ||
|TSSclassifier=strong | |||
|UniProt=Q96QR1 | |UniProt=Q96QR1 | ||
|association_with_transcript=9bp_to_ENST00000292641_5end | |||
|cluster_id=chr5:180018513..180018530,- | |||
|coexpression_cluster_id=C4490 | |||
|description=CAGE_peak_2_at_SCGB3A1_5end | |||
|id=chr5:180018513..180018530,- | |||
|ontology_enrichment_celltype=CL:0002393!4.04e-09!9;CL:0002397!4.04e-09!9;CL:0000875!1.44e-08!3;CL:0002396!1.44e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000875;2.41e-25;3!CL:0002396;2.41e-25;3!CL:0002032;2.08e-09;1!CL:0000557;2.08e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000875,2.21e-25,3;CL:0002396,2.21e-25,3;CL:0002393,7.65e-09,9;CL:0002397,7.65e-09,9 | |||
|ontology_enrichment_development_v019=UBERON:0008801;3.74e-10;1!UBERON:0006298;4.66e-10;1!UBERON:0006242;7.50e-10;1!UBERON:0000358;1.06e-09;1!UBERON:0004874;1.25e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.75e-21!115;UBERON:0006562!6.18e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.81e-18;2!UBERON:0003127;2.24e-18;2!UBERON:0000341;5.28e-18;2!UBERON:0001044;1.13e-13;6!UBERON:0003293;1.13e-13;6!UBERON:0003294;1.13e-13;6!UBERON:0010047;1.13e-13;6!UBERON:0003408;1.13e-13;6!UBERON:0000167;1.13e-13;6!UBERON:0001831;3.74e-10;1!UBERON:0001567;3.74e-10;1!UBERON:0001736;4.66e-10;1!UBERON:0002171;7.50e-10;1!UBERON:0006518;7.50e-10;1!UBERON:0008949;7.50e-10;1!UBERON:0000101;7.50e-10;1!UBERON:0002167;7.50e-10;1!UBERON:0000989;1.25e-09;1!UBERON:0008811;1.25e-09;1!UBERON:0002372;2.08e-09;1!UBERON:0007029;2.08e-09;1!UBERON:0001961;2.08e-09;1!UBERON:0001744;2.08e-09;1!UBERON:0001042;2.08e-09;1!UBERON:0001735;2.08e-09;1!UBERON:0000165;2.13e-07;28!UBERON:0000161;2.18e-07;19!UBERON:0000166;2.18e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.73e-18,2;UBERON:0003127,2.24e-18,2;UBERON:0000341,5.28e-18,2;UBERON:0001044,1.13e-13,6;UBERON:0003293,1.13e-13,6;UBERON:0003294,1.13e-13,6;UBERON:0010047,1.13e-13,6;UBERON:0000167,1.13e-13,6;UBERON:0001831,3.74e-10,1;UBERON:0001567,3.74e-10,1;UBERON:0008801,3.74e-10,1;UBERON:0001736,4.46e-10,1;UBERON:0006298,4.46e-10,1;UBERON:0002171,8.17e-10,1;UBERON:0006518,8.17e-10,1;UBERON:0008949,8.17e-10,1;UBERON:0000101,8.17e-10,1;UBERON:0002167,8.17e-10,1;UBERON:0000989,1.25e-09,1;UBERON:0008811,1.25e-09,1;UBERON:0006258,1.25e-09,1;UBERON:0005876,1.25e-09,1;UBERON:0004874,1.25e-09,1;UBERON:0000166,1.84e-09,22;UBERON:0007029,1.91e-09,1;UBERON:0002372,2.26e-09,1;UBERON:0001961,2.26e-09,1;UBERON:0001744,2.26e-09,1;UBERON:0001735,2.26e-09,1;UBERON:0007023,1.19e-08,114;UBERON:0003408,2.11e-08,10;UBERON:0001004,5.71e-08,74;UBERON:0000165,3.95e-07,29;UBERON:0000930,3.95e-07,29 | |||
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| ||
|short_description=p2@SCGB3A1 | |||
}} | }} |
Latest revision as of 10:44, 17 September 2015
Short description: | p2@SCGB3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SCGB3A1_5end |
Coexpression cluster: | C4490_trachea_parotid_submaxillary_salivary_throat_aorta_lung |
Association with transcript: | 9bp_to_ENST00000292641_5end |
EntrezGene: | SCGB3A1 |
HGNC: | 18384 |
UniProt: | Q96QR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
non-classical monocyte | 2.21e-25 | 3 |
CD14-low, CD16-positive monocyte | 2.21e-25 | 3 |
intermediate monocyte | 7.65e-09 | 9 |
CD14-positive, CD16-positive monocyte | 7.65e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.73e-18 | 2 |
open tracheal system trachea | 2.24e-18 | 2 |
throat | 5.28e-18 | 2 |
saliva-secreting gland | 1.13e-13 | 6 |
gland of oral region | 1.13e-13 | 6 |
gland of foregut | 1.13e-13 | 6 |
oral gland | 1.13e-13 | 6 |
oral cavity | 1.13e-13 | 6 |
parotid gland | 3.74e-10 | 1 |
cheek | 3.74e-10 | 1 |
parotid gland primordium | 3.74e-10 | 1 |
submandibular gland | 4.46e-10 | 1 |
submandibular gland primordium | 4.46e-10 | 1 |
lower lobe of right lung | 8.17e-10 | 1 |
right lung lobe | 8.17e-10 | 1 |
lower lobe of lung | 8.17e-10 | 1 |
lobe of lung | 8.17e-10 | 1 |
right lung | 8.17e-10 | 1 |
penis | 1.25e-09 | 1 |
intromittent organ | 1.25e-09 | 1 |
lateral plate mesenchyme | 1.25e-09 | 1 |
undifferentiated genital tubercle | 1.25e-09 | 1 |
somatopleure | 1.25e-09 | 1 |
oral opening | 1.84e-09 | 22 |
surface | 1.91e-09 | 1 |
tonsil | 2.26e-09 | 1 |
mucosa-associated lymphoid tissue | 2.26e-09 | 1 |
lymphoid tissue | 2.26e-09 | 1 |
tonsillar ring | 2.26e-09 | 1 |
adult organism | 1.19e-08 | 114 |
gland of gut | 2.11e-08 | 10 |
respiratory system | 5.71e-08 | 74 |
mouth | 3.95e-07 | 29 |
stomodeum | 3.95e-07 | 29 |