FFCP PHASE1:Hg19::chr5:66300419..66300431,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:66300419..66300431,+
|short_description=p9@MAST4
|description=CAGE_peak_9_at_MAST4_5end
|association_with_transcript=-16bp_to_ENST00000261569,uc003juv.2,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=375449 | |EntrezGene=375449 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19037 | |HGNC=19037 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_ENST00000261569,uc003juv.2,uc010ixa.2_5end | |||
|cluster_id=chr5:66300419..66300431,+ | |||
|coexpression_cluster_id=C4513 | |||
|description=CAGE_peak_9_at_MAST4_5end | |||
|id=chr5:66300419..66300431,+ | |||
|ontology_enrichment_celltype=CL:0002139!9.12e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002368;3.13e-10;13!CL:0002076;1.04e-09;42!CL:0002202;1.22e-07;9!CL:0002632;1.22e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,7.05e-12,42;CL:0002368,2.21e-10,13;CL:0000066,1.02e-09,253;CL:0000223,2.47e-09,58;CL:0000076,9.32e-08,63;CL:0002202,1.24e-07,9;CL:0002632,1.24e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;9.80e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.18e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!5.27e-10!79;UBERON:0007798!5.27e-10!79;UBERON:0000055!1.14e-08!69;UBERON:0004111!3.65e-08!241;UBERON:0000490!4.29e-08!138;UBERON:0000477!4.46e-08!286;UBERON:0001981!5.48e-07!60;UBERON:0007500!5.48e-07!60;UBERON:0004537!5.48e-07!60;UBERON:0006965!5.48e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;3.85e-08;15!UBERON:0001558;3.85e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000161,4.09e-09,36;UBERON:0007196,3.73e-08,15;UBERON:0001558,3.73e-08,15;UBERON:0001004,4.32e-08,74;UBERON:0004119,7.81e-08,160;UBERON:0000925,7.81e-08,160;UBERON:0006595,7.81e-08,160;UBERON:0000153,1.17e-07,62;UBERON:0007811,1.17e-07,62;UBERON:0000166,3.34e-07,22 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.845726424575827,0,0,0,0,0,0,0.737201809504527,0,0.655324116390517,0,0.247532705920093,0,0.672325146451775,0,0.730310090387373,0.975865597581014,0.369363174230364,0.612002073732759,0.313454721478088,0.572471974262113,0.273748850145768,0.125542639594803,0,0,0,1.18009283054671,0.767658796194425,0,2.75826367343678,1.204823675113,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398927315243264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0.574752439954483,0,0,0,0.587237189370939,0.382273228125229,0,1.12101712596307,1.05353633910031,0.590129310341499,0,0.822405995998037,1.17030546773475,0.651844533267181,0.946895611469467,0,3.67654507721073,0.589211814949674,1.55073726208535,1.62482318259009,1.40900451698243,1.04047478047903,1.15106533222573,0.829050053357545,2.31842468588042,0.593146252648242,0.535081656179426,1.04535523804977,1.92625882585863,1.14966148080576,0.34362744548263,0,0,0,0,0.150575119077773,0.76791966692651,0,0.236777252044017,0,0.403213486449465,0,0.144824403882799,0,0,0.383587685530591,0,0,0,0.795285947051099,0,1.41802225746102,2.21729397462564,3.33772185633879,0.72038491523742,6.55731518926576,4.07862887062872,0,0.174129737299267,0,0,0,0,1.59009925893364,1.72046919021225,0.347140501607594,2.82653970962005,0.838998872419812,1.92582629358047,0.835979866147242,1.03366703667732,0.71153252537342,0.66944122552934,0.805658634218294,1.52054421143703,0,0.735326160691737,2.43042584364528,0.803697554556718,0.22452937262617,0.225222960966644,1.53316637465883,2.84779697870439,0,0,0,5.23312862571041,0,0.25326102332916,2.1185468930115,0,0,0,1.06748995729705,0.74000264525148,0.933633106199299,0.404132016209064,0.490385709340376,0.605429710579726,0,0,0.312160076830321,0.570471821544449,0.448346041655403,0.117434498643765,0,0,0.204154171254893,0.61417158655884,0,0,0.247266929278557,1.82032272387605,0.718618141816238,0.336672227908132,0.500474079487857,0,0,0.30648779579902,0.300476117813194,0.680593098960126,0,0.213557388818567,0,0,0.206105058476878,0.257640540045629,0,0.337552664482532,0.194874010322397,0.252433774244115,0,0,0,0.201504196455281,0,2.31913023795956,1.09098448236334,2.00763216772303,0.121973706129595,0,0.232387885739037,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,1.40241773803446,0,1.47008711385542,1.26755034821831,0.982827216677626,0.590789906681404,0,0,0.857839051492628,2.41450627898976,2.24803506515239,0.502644862058154,2.03694579348765,0,0,0,0.231860809950154,2.93521735589554,1.29929802984966,2.31492756288305,0.380508304469197,0.790204397959275,0,0,0.234004265139238,0,0.93733833986777,2.85569617938061,2.97727704209012,1.52249488594842,4.94077695473735,1.15014803749563,23.1551721811093,0.968532774145487,1.03664057770386,1.58531948758658,1.8936365013957,0,0,0,0,0,0,0,0.224262168690721,0,0.36669142910475,0.517086863031111,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0.479249710983165,1.14861935834114,0,0.434343920002738,0.410952645100767,0.358121926479791,0,0.394061520403854,0.431255149719035,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0.736148950314839,0,0.271265023699736,0.207970861530807,0.178428988797162,0.315404830067869,0.234282829985426,0.601892199455438,0,0,0,0,0.695068915744663,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0,0.256278298511402,0,0.160853921143607,0,0,0.177561725313127,0.246381468041427,1.03850885836724,0.116210378459959,0.120859449591622,2.6065841139427,3.40699659062816,0.34444334449382,0.182091168006717,0.393373244878272,1.80479845162965,1.23224539367064,0,0,0.422206515571503,0,0.340187410553031,0,1.54227252690289,0.270946437543853,0,0.509752546090077,0.831076008928724,0,1.09629938322967,0.522870902049801,0,0.328014645699706,0,1.44257416306811,0,0,1.72279661398852,0,1.6068392984416,0.193341436584244,0.308097234229289,0.307007349452259,0.137836572484531,0.537101224341368,0,0,0.356128142586949,2.64455864577565,1.72971060628596,15.5687509243393,0.50578890427775,0,0.94443704049192,0,0.616067160352178,0.532306030317022,0,0.37064843820784,0.429374660225974,0.372158369359667,0.949138274156178,0.571890581771475,1.02359116524534,0.42793898803392,0.318203247925937,0.78494864019923,0.539617372749944,0,0.235624804691373,0.808729926293264,1.58510321173008,0.842516912477962,0,0.487426979262569,0,0,0.282810863907425,0,0,0.66343897524122,0.438450885253763,0,1.9676842561399,2.23201414658974,1.239293992399,0.845086807596724,0.143411352204052,0.0982490410131212,0.7133421029625,0.354761064070598,0,0.329294892959902,0,0,2.21310859268678,2.01090682660736,2.17781969722645,1.03558180854457,0.43050537267123,0,3.54744122829341,1.1486170010348,0,0,0,0,0,0,1.08006287447623,0,0,0,1.47024129588619,0,0,0.355709216742071,0.159426272728822,0.399158742865633,0,0.423347165447766,0,0.280797178113459,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0.19538809540204,0.556812347790485,0,0,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| ||
|short_description=p9@MAST4 | |||
}} | }} |
Latest revision as of 11:20, 18 September 2015
Short description: | p9@MAST4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_MAST4_5end |
Coexpression cluster: | C4513_immature_Small_thymus_Mast_CD4_squamous_esophagus |
Association with transcript: | -16bp_to_ENST00000261569, uc003juv.2, uc010ixa.2_5end |
EntrezGene: | MAST4 |
HGNC: | 19037 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 7.05e-12 | 42 |
respiratory epithelial cell | 2.21e-10 | 13 |
epithelial cell | 1.02e-09 | 253 |
endodermal cell | 2.47e-09 | 58 |
squamous epithelial cell | 9.32e-08 | 63 |
epithelial cell of tracheobronchial tree | 1.24e-07 | 9 |
epithelial cell of lower respiratory tract | 1.24e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
orifice | 4.09e-09 | 36 |
tracheobronchial tree | 3.73e-08 | 15 |
lower respiratory tract | 3.73e-08 | 15 |
respiratory system | 4.32e-08 | 74 |
endoderm-derived structure | 7.81e-08 | 160 |
endoderm | 7.81e-08 | 160 |
presumptive endoderm | 7.81e-08 | 160 |
anterior region of body | 1.17e-07 | 62 |
craniocervical region | 1.17e-07 | 62 |
oral opening | 3.34e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.18e-08 | 14 |