FFCP PHASE1:Hg19::chr5:76248681..76248690,+: Difference between revisions
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|id=chr5:76248681..76248690,+
|short_description=p5@CRHBP
|description=CAGE_peak_5_at_CRHBP_5end
|association_with_transcript=1bp_to_NM_001882,uc003ker.2,uc010izx.2...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1393 | |EntrezGene=1393 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2356 | |HGNC=2356 | ||
|TSSclassifier=strong | |||
|UniProt=P24387 | |UniProt=P24387 | ||
|association_with_transcript=1bp_to_NM_001882,uc003ker.2,uc010izx.2_5end | |||
|cluster_id=chr5:76248681..76248690,+ | |||
|coexpression_cluster_id=C1965 | |||
|description=CAGE_peak_5_at_CRHBP_5end | |||
|id=chr5:76248681..76248690,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000037;2.32e-13;1!CL:0001024;2.32e-13;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,2.06e-13,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.11e-53!115;UBERON:0001049!3.94e-38!57;UBERON:0005068!3.94e-38!57;UBERON:0006241!3.94e-38!57;UBERON:0007135!3.94e-38!57;UBERON:0003075!1.45e-36!86;UBERON:0007284!1.45e-36!86;UBERON:0002346!1.90e-34!90;UBERON:0002616!4.67e-34!59;UBERON:0001017!1.10e-32!82;UBERON:0005743!1.16e-32!86;UBERON:0001893!5.78e-32!34;UBERON:0002020!1.09e-31!34;UBERON:0003528!1.09e-31!34;UBERON:0000955!1.19e-31!69;UBERON:0006238!1.19e-31!69;UBERON:0002780!5.80e-31!41;UBERON:0001890!5.80e-31!41;UBERON:0006240!5.80e-31!41;UBERON:0003080!4.51e-30!42;UBERON:0002791!6.22e-30!33;UBERON:0000956!1.41e-29!25;UBERON:0000203!1.41e-29!25;UBERON:0000073!1.33e-28!94;UBERON:0001016!1.33e-28!94;UBERON:0001869!8.73e-28!32;UBERON:0002619!3.53e-27!22;UBERON:0003056!7.01e-26!61;UBERON:0001950!3.34e-23!20;UBERON:0000033!5.38e-21!123;UBERON:0000153!7.94e-21!129;UBERON:0007811!7.94e-21!129;UBERON:0004121!4.82e-17!169;UBERON:0000924!2.17e-16!173;UBERON:0006601!2.17e-16!173;UBERON:0002298!1.25e-14!8;UBERON:0000025!3.98e-12!194;UBERON:0001871!1.46e-10!7;UBERON:0000477!2.07e-10!286;UBERON:0004111!2.90e-10!241;UBERON:0000200!4.44e-10!6;UBERON:0003076!3.91e-09!15;UBERON:0003057!3.91e-09!15;UBERON:0004733!5.19e-09!12;UBERON:0002028!5.19e-09!12;UBERON:0007277!5.19e-09!12;UBERON:0006331!1.47e-08!3;UBERON:0000349!1.71e-08!5;UBERON:0001872!1.88e-08!5;UBERON:0000988!2.25e-08!3;UBERON:0004732!3.10e-08!13;UBERON:0000483!3.30e-08!309;UBERON:0000119!5.14e-08!312;UBERON:0000064!6.59e-08!219;UBERON:0001896!1.02e-07!3;UBERON:0005290!1.02e-07!3;UBERON:0010096!1.02e-07!3;UBERON:0002771!1.50e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002336;5.70e-13;1!UBERON:0002038;5.70e-13;1!UBERON:0011215;5.70e-13;1!UBERON:0001018;5.70e-13;1!UBERON:0009661;5.70e-13;1!UBERON:0002950;5.70e-13;1!UBERON:0002473;5.70e-13;1!UBERON:0005340;5.70e-13;1!UBERON:0003544;5.70e-13;1!UBERON:0005970;5.70e-13;1!UBERON:0002316;5.70e-13;1!UBERON:0001020;5.70e-13;1!UBERON:0001891;5.70e-13;1!UBERON:0002437;5.70e-13;1!UBERON:0001897;4.04e-07;2!UBERON:0001954;4.04e-07;2!UBERON:0005162;4.04e-07;2!UBERON:0000122;4.04e-07;2!UBERON:0003022;4.04e-07;2!UBERON:0002421;4.04e-07;2!UBERON:0010225;4.04e-07;2!UBERON:0002600;4.04e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,4.77e-13,1;UBERON:0009661,4.77e-13,1;UBERON:0002950,4.77e-13,1;UBERON:0001891,4.77e-13,1;UBERON:0009616,4.77e-13,1;UBERON:0010286,4.77e-13,1;UBERON:0002336,6.06e-13,1;UBERON:0011215,6.06e-13,1;UBERON:0001018,6.06e-13,1;UBERON:0002473,6.06e-13,1;UBERON:0005340,6.06e-13,1;UBERON:0003544,6.06e-13,1;UBERON:0005970,6.06e-13,1;UBERON:0002316,6.06e-13,1;UBERON:0001020,6.06e-13,1;UBERON:0002437,6.06e-13,1;UBERON:0001954,2.91e-07,2;UBERON:0003022,2.91e-07,2;UBERON:0002421,2.91e-07,2;UBERON:0002600,2.91e-07,2;UBERON:0005162,4.17e-07,2;UBERON:0000122,4.17e-07,2;UBERON:0001897,4.98e-07,2;UBERON:0010225,4.98e-07,2 | |||
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| ||
|short_description=p5@CRHBP | |||
}} | }} |
Latest revision as of 19:03, 18 September 2015
Short description: | p5@CRHBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CRHBP_5end |
Coexpression cluster: | C1965_Hepatocyte_liver_CD133_CD34_mesenchymal_placenta_kidney |
Association with transcript: | 1bp_to_NM_001882, uc003ker.2, uc010izx.2_5end |
EntrezGene: | CRHBP |
HGNC: | 2356 |
UniProt: | P24387 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 2.06e-13 | 1 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 4.77e-13 | 1 |
midbrain nucleus | 4.77e-13 | 1 |
regional part of midbrain | 4.77e-13 | 1 |
midbrain | 4.77e-13 | 1 |
presumptive midbrain | 4.77e-13 | 1 |
midbrain neural tube | 4.77e-13 | 1 |
corpus callosum | 6.06e-13 | 1 |
central nervous system cell part cluster | 6.06e-13 | 1 |
axon tract | 6.06e-13 | 1 |
intercerebral commissure | 6.06e-13 | 1 |
dorsal telencephalic commissure | 6.06e-13 | 1 |
brain white matter | 6.06e-13 | 1 |
brain commissure | 6.06e-13 | 1 |
white matter | 6.06e-13 | 1 |
nervous system commissure | 6.06e-13 | 1 |
cerebral hemisphere white matter | 6.06e-13 | 1 |
Ammon's horn | 2.91e-07 | 2 |
lobe parts of cerebral cortex | 2.91e-07 | 2 |
hippocampal formation | 2.91e-07 | 2 |
limbic lobe | 2.91e-07 | 2 |
multi cell component structure | 4.17e-07 | 2 |
neuron projection bundle | 4.17e-07 | 2 |
dorsal plus ventral thalamus | 4.98e-07 | 2 |
thalamic complex | 4.98e-07 | 2 |