FFCP PHASE1:Hg19::chr5:79276384..79276388,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:79276384..79276388,-
|short_description=p4@MTX3
|description=CAGE_peak_4_at_MTX3_5end
|association_with_transcript=153bp_to_BX537790_5end
|EntrezGene=3457...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=345778 | |EntrezGene=345778 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=24812 | |HGNC=24812 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=153bp_to_BX537790_5end | |||
|cluster_id=chr5:79276384..79276388,- | |||
|description=CAGE_peak_4_at_MTX3_5end | |||
|id=chr5:79276384..79276388,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000082;3.54e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,3.32e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.11e-07;30 | |||
|ontology_enrichment_disease=DOID:0050687!1.31e-13!143;DOID:14566!2.10e-11!239;DOID:162!2.36e-11!235;DOID:305!7.21e-11!106 | |||
|ontology_enrichment_disease_v019=DOID:3910;3.65e-09;2!DOID:3908;6.42e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,8.36e-09,2;DOID:3908,6.96e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001017!3.40e-08!82;UBERON:0000073!3.69e-08!94;UBERON:0001016!3.69e-08!94;UBERON:0000955!1.78e-07!69;UBERON:0006238!1.78e-07!69;UBERON:0002020!2.55e-07!34;UBERON:0003528!2.55e-07!34;UBERON:0005743!2.91e-07!86;UBERON:0001049!4.58e-07!57;UBERON:0005068!4.58e-07!57;UBERON:0006241!4.58e-07!57;UBERON:0007135!4.58e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;3.65e-09;2!UBERON:0002173;3.65e-09;2!UBERON:0002186;3.65e-09;2!UBERON:0004802;3.54e-07;19!UBERON:0000115;3.54e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,8.36e-09,2;UBERON:0002173,8.36e-09,2;UBERON:0002186,8.36e-09,2;UBERON:0004802,3.32e-07,19;UBERON:0000115,3.32e-07,19 | |||
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| ||
|short_description=p4@MTX3 | |||
}} | }} |
Latest revision as of 22:07, 18 September 2015
Short description: | p4@MTX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MTX3_5end |
Coexpression cluster: | NA |
Association with transcript: | 153bp_to_BX537790_5end |
EntrezGene: | MTX3 |
HGNC: | 24812 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 3.32e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 8.36e-09 | 2 |
alveolar duct | 8.36e-09 | 2 |
bronchiole | 8.36e-09 | 2 |
respiratory tract epithelium | 3.32e-07 | 19 |
lung epithelium | 3.32e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 8.36e-09 | 2 |
non-small cell lung carcinoma | 6.96e-08 | 5 |