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FFCP PHASE1:Hg19::chr5:98109731..98109740,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:98109731..98109740,+
|DHSsupport=supported 
|short_description=p19@RGMB
|DPIdataset=robust
|description=CAGE_peak_19_at_RGMB_5end
|association_with_transcript=392bp_to_ENST00000513185_5end
|EntrezGene=285704
|EntrezGene=285704
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=26896
|HGNC=26896
|TSSclassifier=strong
|UniProt=Q6NW40
|UniProt=Q6NW40
|association_with_transcript=392bp_to_ENST00000513185_5end
|cluster_id=chr5:98109731..98109740,+
|description=CAGE_peak_19_at_RGMB_5end
|id=chr5:98109731..98109740,+
|ontology_enrichment_celltype=CL:0000055!5.03e-09!180
|ontology_enrichment_celltype_v019=CL:0002582;1.18e-31;3!CL:0002521;4.59e-15;3!CL:0000511;2.93e-12;1!CL:0002625;2.93e-12;1!CL:0000216;2.93e-12;1!CL:0002334;2.28e-08;12!CL:0002596;9.43e-07;2
|ontology_enrichment_celltype_v019_2=CL:0002582,3.76e-31,3;CL:0002521,3.99e-15,3;CL:0000511,2.63e-12,1;CL:0002625,2.63e-12,1;CL:0000216,2.63e-12,1;CL:0002334,3.02e-08,12;CL:0002596,9.44e-07,2
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=DOID:2513;9.60e-12;1
|ontology_enrichment_disease_v019_2=DOID:2513,5.05e-12,1
|ontology_enrichment_uberon=UBERON:0003102!2.36e-07!95;UBERON:0000475!7.08e-07!365
|ontology_enrichment_uberon_v019=UBERON:0002190;4.59e-15;3!UBERON:0001136;2.93e-12;1!UBERON:0001343;2.93e-12;1!UBERON:0004910;2.93e-12;1!UBERON:0004813;2.93e-12;1!UBERON:0002072;2.08e-09;5!UBERON:0004909;9.43e-07;2!UBERON:0005396;9.43e-07;2
|ontology_enrichment_uberon_v019_2=UBERON:0002190,3.99e-15,3;UBERON:0001136,2.63e-12,1;UBERON:0001343,2.63e-12,1;UBERON:0004910,2.63e-12,1;UBERON:0005154,2.63e-12,1;UBERON:0005295,2.63e-12,1;UBERON:0004813,2.63e-12,1;UBERON:0005297,2.63e-12,1;UBERON:0005294,2.63e-12,1;UBERON:0010141,2.63e-12,1;UBERON:0005891,2.63e-12,1;UBERON:0002072,1.92e-09,5;UBERON:0004909,8.93e-07,2;UBERON:0005396,9.44e-07,2
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|phase1_expression=0,0,0,0,0.446961094427288,0,2.53299878168311,1.26343974685366,0.522371256399677,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0.0787107813136792,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0.367663080345869,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0.573673241497627,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0.624320153660641,0,0.298897361103602,0,0,0,0.204154171254893,0.122834317311768,0.206651562351531,2.37600571456411,0.741800787835671,0,0,0,0,0,0.438977620880838,0,0.901428353439581,0,0,0,0.423863802319124,0.300091096084402,0.618315175430633,0,0.744467425326359,0,0,0,0.552299391853796,0.646584227275248,0.355009592516614,0.705264687593482,0.169560592310488,0.193260853163297,0,0,0.121973706129595,0.265059536642971,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570762456703795,0,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0,0,0,0,0,1.17217447210047,0,0.308482478109971,0,0.285826432630578,0,0,0.07333828582095,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0.718874566474748,0,0,0.289562613335158,0,0.179060963239896,0,0.197030760201927,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.535286966391485,0.157702415033935,0.585707074963566,0.601892199455438,0,0,0,0.184369168541703,0.955719759148911,0.391602314925481,0,0,0,0,0,0,0,0.248107807818777,0,0,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0.355123450626254,1.06765302817952,1.03850885836724,1.04589340613963,0.120859449591622,0.40101294060657,0.0920809889358963,0.114814448164607,0.364182336013434,0.917870904715969,0,0,0.784349769176855,0,0,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,3.21367859688319,1.06337790121334,0,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,0.267096106940212,0.165284915360978,0.384380134730212,0.127612712494584,0,0,0.94443704049192,0.6970372701606,0,0,1.73986598415015,1.66791797193528,0.572499546967965,0,0,0,0,0,3.18203247925937,0.78494864019923,0,0,0,0,0,0,0,0.487426979262569,0,0,0.282810863907425,0,0.551365343546124,0,2.19225442626881,0,0,0.202910376962704,0,0,0.143411352204052,0,0.35667105148125,0.354761064070598,0,0.987884678879706,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.333926115068718,0.16480387422676,0,0.398495976502139,0,0,0,0,1.86623752597084,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0.0874599999961957,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0.448788222048861,0.108647371922008,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41532103205343,3.05515072466813,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0.485560759068186,0,0,0.61214552326098,0.063186579628488,0.300646838828985,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0.146178634172371,0,0.193978032976839,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0.121499113316049,0,0,0,0.211200673038813,0,0,0,0,0,0.542999601753713,0.864221491201268,0.326587360109409,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0.854299300541557,0.943225830597996,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0,0,0.606596470166591,0.285465333544967,0,0,0,0,0,0,0,0,0,0.457680136793847,0.302461847526478,0,0,0.318593534327405,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0.796191777397232,0,0.343395705182793,0,0,0.192619830407303,0,0,0,0,0,1.25362188757041,0,0.219284049578707,0.353378291891762,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0.3062454773532,0.192687675289379,0,0,0.82046545696302,0.504143392443436,0.0691572524642179,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0.236664001461131,0.170426809518315,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0.109940516745429,0,0.463044948647668,0,0,0.245148321753905,0,0,0,0,0,0.281951753939561,0.0644578879735772,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0.18378979906969,0.250707539292375,0.606229585745915,0,0.829169439458779,0,0,0.476128862927481,0.0645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|short_description=p19@RGMB
}}
}}

Latest revision as of 10:42, 19 September 2015

Short description:p19@RGMB
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_19_at_RGMB_5end
Coexpression cluster:NA
Association with transcript: 392bp_to_ENST00000513185_5end
EntrezGene:RGMB
HGNC: 26896
UniProt: Q6NW40
Genome view:ZENBU


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CAGE Expression




0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5




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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data