FFCP PHASE1:Hg19::chr6:107235378..107235418,-: Difference between revisions
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|id=chr6:107235378..107235418,-
|short_description=p1@ENST00000430094
|description=CAGE_peak_1_at_ENST00000430094_5end
|association_with_transcript=-24bp_to_ENST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-24bp_to_ENST00000430094_5end | |||
|cluster_id=chr6:107235378..107235418,- | |||
|coexpression_cluster_id=C1825 | |||
|description=CAGE_peak_1_at_ENST00000430094_5end | |||
|id=chr6:107235378..107235418,- | |||
|ontology_enrichment_celltype=CL:0000181!2.30e-15!12;CL:0000417!2.30e-15!12;CL:0000668!2.30e-15!12;CL:0000414!2.30e-15!12;CL:0000412!2.30e-15!12;CL:0000182!2.30e-15!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.24e-11;12!CL:0000313;1.48e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.24e-11,12;CL:0000313,1.48e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0003104;4.16e-16;31!UBERON:0003918;9.79e-14;10!UBERON:0007687;9.79e-14;10!UBERON:0004161;1.96e-12;11!UBERON:0009497;1.51e-10;13!UBERON:0006242;8.17e-10;1 | |||
|ontology_enrichment_disease=DOID:4468!1.22e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:2152;1.48e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.48e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0005172!4.96e-21!55;UBERON:0005173!4.96e-21!55;UBERON:0002417!1.72e-18!61;UBERON:0000916!1.72e-18!61;UBERON:0009497!6.79e-17!25;UBERON:0000015!6.79e-17!25;UBERON:0002423!6.79e-17!25;UBERON:0006235!6.79e-17!25;UBERON:0004161!6.79e-17!25;UBERON:0008835!5.07e-16!22;UBERON:0003894!5.07e-16!22;UBERON:0005057!6.80e-16!26;UBERON:0002107!1.90e-15!19;UBERON:0006925!1.90e-15!19;UBERON:0008836!1.90e-15!19;UBERON:0009854!3.10e-15!23;UBERON:0003929!3.54e-14!54;UBERON:0007499!7.52e-14!25;UBERON:0009856!3.08e-13!26;UBERON:0005177!3.54e-12!107;UBERON:0006947!1.63e-11!3;UBERON:0004054!1.63e-11!3;UBERON:0002368!3.45e-11!35;UBERON:0000949!6.17e-10!45;UBERON:0002530!1.84e-09!59;UBERON:0005911!2.49e-09!82;UBERON:0009569!6.07e-09!113;UBERON:0002365!8.49e-09!31;UBERON:0002330!8.49e-09!31;UBERON:0005904!9.45e-09!4;UBERON:0000466!2.56e-08!126;UBERON:0006554!4.34e-08!44;UBERON:0000489!4.36e-08!32;UBERON:0002113!6.42e-08!27;UBERON:0003918!6.42e-08!27;UBERON:0005095!6.42e-08!27;UBERON:0007687!6.42e-08!27;UBERON:0001008!7.33e-08!45;UBERON:0000077!8.83e-08!130;UBERON:0004921!8.92e-08!129;UBERON:0004185!8.92e-08!129;UBERON:0001007!2.75e-07!155;UBERON:0001555!2.75e-07!155;UBERON:0007026!2.75e-07!155;UBERON:0004119!5.35e-07!169;UBERON:0000925!5.35e-07!169;UBERON:0006595!5.35e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;6.34e-16;25!UBERON:0002107;1.04e-15;19!UBERON:0006925;1.04e-15;19!UBERON:0005172;2.24e-14;52!UBERON:0005173;2.24e-14;52!UBERON:0002417;1.26e-09;58!UBERON:0000916;1.26e-09;58!UBERON:0004911;1.48e-09;1!UBERON:0002365;1.70e-09;31!UBERON:0002330;1.70e-09;31!UBERON:0002113;1.44e-08;24!UBERON:0011143;1.44e-08;24!UBERON:0002368;3.87e-08;33!UBERON:0000489;4.67e-07;29!UBERON:0006554;8.15e-07;30!UBERON:0001008;8.15e-07;30 | |||
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| ||
|short_description=p1@ENST00000430094 | |||
}} | }} |
Latest revision as of 18:00, 30 July 2015
Short description: | p1@ENST00000430094 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000430094_5end |
Coexpression cluster: | C1825_pancreas_Hepatocyte_liver_colon_gastric_hepatoma_hepatoblastoma |
Association with transcript: | -24bp_to_ENST00000430094_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.24e-11 | 12 |
serous secreting cell | 1.48e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
abdomen element | 1.99e-20 | 54 |
abdominal segment element | 1.99e-20 | 54 |
abdominal segment of trunk | 3.50e-18 | 60 |
abdomen | 3.50e-18 | 60 |
epithelium of foregut-midgut junction | 6.27e-16 | 25 |
anatomical boundary | 6.27e-16 | 25 |
hepatobiliary system | 6.27e-16 | 25 |
foregut-midgut junction | 6.27e-16 | 25 |
septum transversum | 6.27e-16 | 25 |
liver | 1.03e-15 | 19 |
digestive gland | 1.03e-15 | 19 |
liver bud | 1.03e-15 | 19 |
trunk region element | 6.89e-14 | 101 |
hepatic diverticulum | 1.65e-13 | 22 |
liver primordium | 1.65e-13 | 22 |
digestive tract diverticulum | 6.69e-13 | 23 |
epithelial sac | 7.85e-12 | 25 |
sac | 2.34e-11 | 26 |
subdivision of trunk | 2.04e-10 | 112 |
epithelium of female gonad | 1.48e-09 | 1 |
exocrine gland | 1.90e-09 | 31 |
exocrine system | 1.90e-09 | 31 |
endocrine system | 1.49e-08 | 45 |
endocrine gland | 2.61e-08 | 35 |
kidney | 6.64e-08 | 26 |
kidney mesenchyme | 6.64e-08 | 26 |
upper urinary tract | 6.64e-08 | 26 |
kidney rudiment | 6.64e-08 | 26 |
kidney field | 6.64e-08 | 26 |
gut epithelium | 5.91e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.48e-09 | 1 |