FFCP PHASE1:Hg19::chr6:138893590..138893601,-: Difference between revisions
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|id=chr6:138893590..138893601,-
|short_description=p22@NHSL1
|description=CAGE_peak_22_at_NHSL1_5end
|association_with_transcript=0bp_to_ENST00000534376_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57224 | |EntrezGene=57224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21021 | |HGNC=21021 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000534376_5end | |||
|cluster_id=chr6:138893590..138893601,- | |||
|description=CAGE_peak_22_at_NHSL1_5end | |||
|id=chr6:138893590..138893601,- | |||
|ontology_enrichment_celltype=CL:0000133!2.46e-13!59;CL:0000147!1.60e-10!14;CL:0000221!5.27e-10!71;CL:0000148!1.24e-09!10;CL:0000541!1.24e-09!10;CL:0002319!3.49e-09!25;CL:0000047!9.67e-09!8;CL:0000710!2.01e-08!20;CL:0000075!3.52e-08!27;CL:0000333!1.11e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000148;7.06e-20;10!CL:0000147;3.71e-14;14!CL:0000710;8.00e-14;20!CL:0000075;1.53e-13;27!CL:0002567;8.32e-12;3!CL:0002077;6.45e-11;34!CL:0002566;5.30e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.74e-20,10;CL:0000541,5.74e-20,10;CL:0000147,3.20e-14,14;CL:0000710,6.94e-14,20;CL:0000075,1.62e-13,27;CL:0002567,8.35e-12,3;CL:0000133,3.59e-11,59;CL:0002077,1.16e-10,34;CL:0002566,3.31e-09,1;CL:0000221,6.36e-09,72;CL:0000333,3.35e-08,41 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.04e-11;30!UBERON:0004161;8.46e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.19e-17!86;UBERON:0000073!2.63e-17!94;UBERON:0001016!2.63e-17!94;UBERON:0001017!3.28e-15!82;UBERON:0003075!5.54e-13!86;UBERON:0007284!5.54e-13!86;UBERON:0003056!1.56e-12!61;UBERON:0002346!4.94e-12!90;UBERON:0004121!5.17e-12!169;UBERON:0000924!1.85e-11!173;UBERON:0006601!1.85e-11!173;UBERON:0000955!1.11e-09!69;UBERON:0006238!1.11e-09!69;UBERON:0002616!2.77e-09!59;UBERON:0001893!6.59e-09!34;UBERON:0000033!1.03e-08!123;UBERON:0001049!1.07e-08!57;UBERON:0005068!1.07e-08!57;UBERON:0006241!1.07e-08!57;UBERON:0007135!1.07e-08!57;UBERON:0000153!1.36e-08!129;UBERON:0007811!1.36e-08!129;UBERON:0001869!1.81e-08!32;UBERON:0002791!4.10e-08!33;UBERON:0000119!4.71e-08!312;UBERON:0002780!6.34e-08!41;UBERON:0001890!6.34e-08!41;UBERON:0006240!6.34e-08!41;UBERON:0007625!8.98e-08!11;UBERON:0000483!9.20e-08!309;UBERON:0003080!1.20e-07!42;UBERON:0002020!9.47e-07!34;UBERON:0003528!9.47e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;5.30e-09;1!UBERON:0002171;5.30e-09;1!UBERON:0006518;5.30e-09;1!UBERON:0008949;5.30e-09;1!UBERON:0000101;5.30e-09;1!UBERON:0002167;5.30e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,7.27e-09,1;UBERON:0006518,7.27e-09,1;UBERON:0008949,7.27e-09,1;UBERON:0000101,7.27e-09,1;UBERON:0002167,7.27e-09,1;UBERON:0001301,9.91e-09,1 | |||
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| ||
|short_description=p22@NHSL1 | |||
}} | }} |
Latest revision as of 05:09, 25 September 2015
Short description: | p22@NHSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_NHSL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000534376_5end |
EntrezGene: | NHSL1 |
HGNC: | 21021 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.74e-20 | 10 |
melanoblast | 5.74e-20 | 10 |
pigment cell | 3.20e-14 | 14 |
neurecto-epithelial cell | 6.94e-14 | 20 |
columnar/cuboidal epithelial cell | 1.62e-13 | 27 |
light melanocyte | 8.35e-12 | 3 |
neurectodermal cell | 3.59e-11 | 59 |
ecto-epithelial cell | 1.16e-10 | 34 |
dark melanocyte | 3.31e-09 | 1 |
ectodermal cell | 6.36e-09 | 72 |
migratory neural crest cell | 3.35e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 7.27e-09 | 1 |
right lung lobe | 7.27e-09 | 1 |
lower lobe of lung | 7.27e-09 | 1 |
lobe of lung | 7.27e-09 | 1 |
right lung | 7.27e-09 | 1 |
epididymis | 9.91e-09 | 1 |