FFCP PHASE1:Hg19::chr6:158589231..158589255,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:158589231..158589255,-
|short_description=p2@SERAC1
|description=CAGE_peak_2_at_SERAC1_5end
|association_with_transcript=35bp_to_ENST00000367101_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84947 | |EntrezGene=84947 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21061 | |HGNC=21061 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=35bp_to_ENST00000367101_5end | |||
|cluster_id=chr6:158589231..158589255,- | |||
|description=CAGE_peak_2_at_SERAC1_5end | |||
|id=chr6:158589231..158589255,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002605;3.20e-11;3!CL:0002580;3.37e-11;3!CL:0000135;4.44e-11;3!CL:0000388;4.44e-11;3!CL:0002579;1.27e-10;3!CL:0000197;2.48e-10;6!CL:0000098;2.48e-10;6!CL:0002167;2.48e-10;6!CL:0002334;1.04e-09;12!CL:0000128;3.08e-08;7!CL:0000126;3.08e-08;7!CL:0000127;3.08e-08;7!CL:0002319;7.03e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.51e-11,76;CL:0002580,1.91e-11,3;CL:0002605,2.90e-11,3;CL:0000135,3.57e-11,3;CL:0000388,3.57e-11,3;CL:0002579,1.30e-10,3;CL:0000197,2.27e-10,6;CL:0000098,2.27e-10,6;CL:0002167,2.27e-10,6;CL:0002334,8.10e-10,12;CL:0000128,2.63e-08,7;CL:0000126,2.63e-08,7;CL:0000127,2.63e-08,7;CL:0002453,2.63e-08,7;CL:0002319,6.31e-07,25;CL:0000133,6.66e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.96e-09!94;UBERON:0001016!9.96e-09!94;UBERON:0005743!8.52e-08!86;UBERON:0001017!6.70e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.44e-11;3!UBERON:0000043;4.44e-11;3!UBERON:0007845;4.44e-11;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,3.57e-11,3;UBERON:0000043,3.57e-11,3;UBERON:0007845,3.57e-11,3 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.563817616383885,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0.672325146451775,0,0,0,0,0.204000691244253,0.626909442956176,3.43483184557268,1.36874425072884,3.38965126905968,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0.369754010166788,0.0774672005803016,0.142169232487422,0,0,0.401088894940283,0,0.223915474239924,0,0.257575567634187,0,0.377875943688809,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0.641858054152187,0,0,0,0,0,0,0.622822248995575,0.251248665256743,0,0,0,0,0.632924774881769,0.211255286311942,0,0,0,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0,0.263384084775077,0,0,0.205601498999509,0.668745981562712,0.32592226663359,0.473447805734733,0,0.222820913770347,0.294605907474837,0.221533894583621,0.270803863765016,0.384273959177026,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0.604820229674197,0,0.144824403882799,0,0,0.255725123687061,0.722878304769133,3.50936537445123,9.55987025141436,0,0.486634870302636,0.283604451492204,0.221729397462564,0.87834785693126,0.327447688744282,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0.238490624305342,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0.208994966536811,0.516833518338658,0.35576626268671,0.66944122552934,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,3.97577561356255,0.759783069987479,1.72131935057184,0.286836620748814,0,1.12135520028461,1.06748995729705,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.245668634623536,0.206651562351531,9.50402285825643,4.94533858557114,0,0.718618141816238,0.336672227908132,0,0,0,2.14541457059314,5.10809400282429,0.340296549480063,0.538168907066586,0.85422955527427,0.423863802319124,0,0.103052529238439,1.03056216018252,0.37223371266318,0.506328996723799,0.487185025805993,0,1.01254888506529,4.36444353410792,0,0.10075209822764,0,0.193260853163297,0.545492241181669,0.286804595389004,0.487894824518382,0.662648841607426,0.348581828608555,0.518305275076852,0.756962552626885,0.72995471815166,0,0.643240938192885,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0.269662616320329,0,0,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0.514703430895577,0.219500570817251,0,0.100528972411631,0,0,0,0,0.579652024875384,0.469634776943287,0.288732895522148,0,0.190254152234598,0,0,0.246217006087397,0.702012795417713,0,0.93733833986777,0.503946384596579,1.13420077793909,0,0,0,0,0,0,0,0.12624243342638,0,0,0,1.71072446022705,0.102827492703324,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.904318131178758,0.871533458600294,0.99972991182057,1.2162378064119,0.502257091432126,0,0.479249710983165,4.59447743336456,0,1.01346914667305,0,0.179060963239896,0.112085143993527,0.197030760201927,0,0.385029108839245,0.508189248444927,0,2.31986643833309,0,1.27587750330633,0.749007023947182,0,0,0.36807447515742,0,0.271265023699736,5.40724239980099,9.8135943838439,10.7237642223076,3.86566669475954,0.902838299183157,0,0,1.32845119707087,1.10621501125022,0.173767228936166,0,0,0,0.215714200818617,0.213455115606889,0,0,0,2.72918588600655,5.06424511850606,1.96462066103151,2.81906128362542,1.02341449813341,1.60853921143608,0,0,0,0.164254312027618,0,0,0.120859449591622,0.200506470303285,0,0,0,0.262248829918848,0,0.15403067420883,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0.219259876645935,0,0.512900250232778,0.328014645699706,0.650756789328606,0,0.366277859273374,0.41254749960294,0,0,0,0.386682873168488,0,0.307007349452259,0,0.107420244868274,0,0.170453254832202,0,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0.62962469366128,0,0,0,0,0.37064843820784,0.286249773483982,0,0.316379424718726,2.2875623270859,0.255897791311334,0,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0.281695602532241,0,0.589494246078727,0.35667105148125,0,1.68886108238131,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0.106824071127473,0,0,0,0,0.142283686696828,0,0.199579371432817,0,0,0,0.280797178113459,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0,0,1.23087398947712,0.811367035427949,0.33307196799782,0,0.561421621224659,0,0.121360521749513,0,0.568272293612826,0.23874448473769,0,0.307160702099232,0.994147647766298,0.844016498463076,0,0.16480387422676,0.422250816255987,0.19924798825107,0.276283915531148,0.503865495708552,2.86352311006033,0,0.311039587661807,0.0898683511473268,0,0,0.0986434056369336,0,0,0.969332746095218,0.278304294485554,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0.520874984799877,0,0.844175070377856,0,0.221158519862449,0,0.219385397153973,0,0,0.0769502585037971,2.27884111694002,0,0.179515288819544,0.217294743844016,0,0,0,0,0,0.166211681900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| ||
|short_description=p2@SERAC1 | |||
}} | }} |
Latest revision as of 11:35, 16 September 2015
Short description: | p2@SERAC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SERAC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 35bp_to_ENST00000367101_5end |
EntrezGene: | SERAC1 |
HGNC: | 21061 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.51e-11 | 76 |
preadipocyte of the breast | 1.91e-11 | 3 |
astrocyte of the cerebral cortex | 2.90e-11 | 3 |
fibrocyte | 3.57e-11 | 3 |
tendon cell | 3.57e-11 | 3 |
omentum preadipocyte | 1.30e-10 | 3 |
receptor cell | 2.27e-10 | 6 |
sensory epithelial cell | 2.27e-10 | 6 |
olfactory epithelial cell | 2.27e-10 | 6 |
preadipocyte | 8.10e-10 | 12 |
oligodendrocyte | 2.63e-08 | 7 |
macroglial cell | 2.63e-08 | 7 |
astrocyte | 2.63e-08 | 7 |
oligodendrocyte precursor cell | 2.63e-08 | 7 |
neural cell | 6.31e-07 | 25 |
neurectodermal cell | 6.66e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 3.57e-11 | 3 |
tendon | 3.57e-11 | 3 |
regular connective tissue | 3.57e-11 | 3 |